RNA–Protein interactions for RNA: ENST00000350435.11

UBE2D3-205, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-205ENST00000350435 KRTAP25-1Q3LHN0 102 aa4.04□□□□□ -1.76
UBE2D3-205ENST00000350435 A8MUU9 505 aa4.02□□□□□ -1.77
UBE2D3-205ENST00000350435 IGKV2D-30A0A075B6S6 120 aa4.01□□□□□ -1.77
UBE2D3-205ENST00000350435 KRTAP16-1A8MUX0 517 aa3.98□□□□□ -1.77
UBE2D3-205ENST00000350435 KRTAP19-8Q3LI54 63 aa3.98□□□□□ -1.77
UBE2D3-205ENST00000350435 MT4P47944 62 aa3.93□□□□□ -1.78
UBE2D3-205ENST00000350435 H0YAA0 97 aa3.92□□□□□ -1.78
UBE2D3-205ENST00000350435 K7ERS5 55 aa3.91□□□□□ -1.78
UBE2D3-205ENST00000350435 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.88□□□□□ -1.79
UBE2D3-205ENST00000350435 SPRR2GQ9BYE4 73 aa3.88□□□□□ -1.79
UBE2D3-205ENST00000350435 A0A1B0GU33 70 aa3.87□□□□□ -1.79
UBE2D3-205ENST00000350435 H1FX-AS1Q4G0G2 97 aa3.87□□□□□ -1.79
UBE2D3-205ENST00000350435 P0C880 135 aa3.85□□□□□ -1.79
UBE2D3-205ENST00000350435 AHNAKQ09666 5890 aaKnown RBP3.85□□□□□ -1.79
UBE2D3-205ENST00000350435 PRO2289Q9P1D8 64 aa3.79□□□□□ -1.8
UBE2D3-205ENST00000350435 KRTAP12-2P59991 146 aa3.76□□□□□ -1.81
UBE2D3-205ENST00000350435 SPINT4Q6UDR6 99 aa3.73□□□□□ -1.81
UBE2D3-205ENST00000350435 NDUFAF8A1L188 74 aa3.68□□□□□ -1.82
UBE2D3-205ENST00000350435 MUC5BQ9HC84 5762 aaPredicted RBP3.67□□□□□ -1.82
UBE2D3-205ENST00000350435 MUC5ACP98088 5654 aa3.67□□□□□ -1.82
UBE2D3-205ENST00000350435 MT1XP80297 61 aa3.66□□□□□ -1.82
UBE2D3-205ENST00000350435 CRIPTQ9P021 101 aa3.65□□□□□ -1.83
UBE2D3-205ENST00000350435 A0A0A0MQY5 61 aa3.62□□□□□ -1.83
UBE2D3-205ENST00000350435 KRTAP5-11Q6L8G4 156 aa3.6□□□□□ -1.83
UBE2D3-205ENST00000350435 S4R3F8 94 aa3.57□□□□□ -1.84
UBE2D3-205ENST00000350435 MT3P25713 68 aa3.56□□□□□ -1.84
UBE2D3-205ENST00000350435 KRTAP10-7P60409 375 aaPredicted RBP3.56□□□□□ -1.84
UBE2D3-205ENST00000350435 KRTAP5-4Q6L8H1 288 aa3.56□□□□□ -1.84
UBE2D3-205ENST00000350435 KRTAP13-4Q3LI77 160 aa3.55□□□□□ -1.84
UBE2D3-205ENST00000350435 LUZP6Q538Z0 58 aa3.54□□□□□ -1.84
UBE2D3-205ENST00000350435 C10orf95Q9H7T3 257 aa3.53□□□□□ -1.84
UBE2D3-205ENST00000350435 A0A0D9SG42 100 aa3.5□□□□□ -1.85
UBE2D3-205ENST00000350435 M0QZ58 72 aa3.5□□□□□ -1.85
UBE2D3-205ENST00000350435 KRTAP12-1P59990 96 aa3.5□□□□□ -1.85
UBE2D3-205ENST00000350435 KRTAP10-12P60413 245 aa3.47□□□□□ -1.85
UBE2D3-205ENST00000350435 KRTAP19-3Q7Z4W3 81 aa3.47□□□□□ -1.85
UBE2D3-205ENST00000350435 PLAC4Q8WY50 150 aa3.47□□□□□ -1.85
UBE2D3-205ENST00000350435 KRTAP20-2Q3LI61 65 aa3.44□□□□□ -1.86
UBE2D3-205ENST00000350435 LCE1EQ5T753 118 aa3.41□□□□□ -1.86
UBE2D3-205ENST00000350435 PP632Q6XCG6 107 aa3.41□□□□□ -1.86
UBE2D3-205ENST00000350435 KRTAP5-8O75690 187 aa3.34□□□□□ -1.87
UBE2D3-205ENST00000350435 KRTAP5-1Q6L8H4 278 aa3.31□□□□□ -1.88
UBE2D3-205ENST00000350435 MT1EP04732 61 aa3.3□□□□□ -1.88
UBE2D3-205ENST00000350435 MT1GP13640 62 aa3.3□□□□□ -1.88
UBE2D3-205ENST00000350435 CAMK2N1Q7Z7J9 78 aa3.3□□□□□ -1.88
UBE2D3-205ENST00000350435 KRTAP19-7Q3SYF9 63 aa3.28□□□□□ -1.88
UBE2D3-205ENST00000350435 R4GN34 69 aa3.23□□□□□ -1.89
UBE2D3-205ENST00000350435 MT1MQ8N339 61 aa3.22□□□□□ -1.89
UBE2D3-205ENST00000350435 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
UBE2D3-205ENST00000350435 KRTAP12-4P60329 112 aa3.21□□□□□ -1.9
UBE2D3-205ENST00000350435 KRTAP4-3Q9BYR4 195 aa3.17□□□□□ -1.9
UBE2D3-205ENST00000350435 INE1O15225 51 aa3.16□□□□□ -1.9
UBE2D3-205ENST00000350435 SYNE1Q8NF91 8797 aaKnown RBP3.14□□□□□ -1.91
UBE2D3-205ENST00000350435 KRTAP5-2Q701N4 177 aa3.12□□□□□ -1.91
UBE2D3-205ENST00000350435 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
UBE2D3-205ENST00000350435 OBSCNQ5VST9 7968 aa3.1□□□□□ -1.91
UBE2D3-205ENST00000350435 TNP1P09430 55 aa3.09□□□□□ -1.91
UBE2D3-205ENST00000350435 MT1LQ93083 61 aa3.01□□□□□ -1.93
UBE2D3-205ENST00000350435 KRTAP9-6A8MVA2 160 aa3□□□□□ -1.93
UBE2D3-205ENST00000350435 KRTAP5-5Q701N2 237 aaPredicted RBP3□□□□□ -1.93
UBE2D3-205ENST00000350435 KRTAP19-5Q3LI72 72 aa2.98□□□□□ -1.93
UBE2D3-205ENST00000350435 LCE3CQ5T5A8 94 aa2.94□□□□□ -1.94
UBE2D3-205ENST00000350435 LCE3AQ5TA76 89 aa2.8□□□□□ -1.96
UBE2D3-205ENST00000350435 KRTAP12-3P60328 96 aa2.7□□□□□ -1.98
UBE2D3-205ENST00000350435 LCE3EQ5T5B0 92 aa2.67□□□□□ -1.98
UBE2D3-205ENST00000350435 KRTAP6-2Q3LI66 62 aa2.65□□□□□ -1.99
UBE2D3-205ENST00000350435 KRTAP6-1Q3LI64 71 aa2.59□□□□□ -1.99
UBE2D3-205ENST00000350435 MT1AP04731 61 aa2.55□□□□□ -2
UBE2D3-205ENST00000350435 PHGR1C9JFL3 82 aa2.52□□□□□ -2.01
UBE2D3-205ENST00000350435 LCE1BQ5T7P3 118 aa2.36□□□□□ -2.03
UBE2D3-205ENST00000350435 LCE1CQ5T751 118 aa2.24□□□□□ -2.05
UBE2D3-205ENST00000350435 LCE3DQ9BYE3 92 aa2.15□□□□□ -2.07
UBE2D3-205ENST00000350435 PRM1P04553 51 aa2□□□□□ -2.09
UBE2D3-205ENST00000350435 MUC19Q7Z5P9 8384 aa1.95□□□□□ -2.1
UBE2D3-205ENST00000350435 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
UBE2D3-205ENST00000350435 KRTAP21-2Q3LI59 83 aa1.7□□□□□ -2.14
UBE2D3-205ENST00000350435 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 6.8 ms