RNA–Protein interactions for RNA: ENST00000338469.3

TREM2-201, Transcript of triggering receptor expressed on myeloid cells 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM2, Length 860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2-201ENST00000338469 LCE5AQ5TCM9 118 aa4.77□□□□□ -1.65
TREM2-201ENST00000338469 LCE1AQ5T7P2 110 aa4.72□□□□□ -1.65
TREM2-201ENST00000338469 KRTAP8-1Q8IUC2 63 aa4.71□□□□□ -1.66
TREM2-201ENST00000338469 K7ERS5 55 aa4.69□□□□□ -1.66
TREM2-201ENST00000338469 CDC42SE1Q9NRR8 79 aa4.68□□□□□ -1.66
TREM2-201ENST00000338469 KRTAP10-7P60409 375 aaPredicted RBP4.66□□□□□ -1.66
TREM2-201ENST00000338469 SPRR2DP22532 72 aa4.64□□□□□ -1.67
TREM2-201ENST00000338469 H3BS24 57 aa4.61□□□□□ -1.67
TREM2-201ENST00000338469 GPR98Q8WXG9 6306 aa4.61□□□□□ -1.67
TREM2-201ENST00000338469 KRTAP10-12P60413 245 aa4.6□□□□□ -1.67
TREM2-201ENST00000338469 C10orf95Q9H7T3 257 aa4.56□□□□□ -1.68
TREM2-201ENST00000338469 BRK1Q8WUW1 75 aa4.55□□□□□ -1.68
TREM2-201ENST00000338469 TNP1P09430 55 aa4.5□□□□□ -1.69
TREM2-201ENST00000338469 ROMO1P60602 79 aa4.43□□□□□ -1.7
TREM2-201ENST00000338469 KRTAP19-4Q3LI73 84 aa4.43□□□□□ -1.7
TREM2-201ENST00000338469 KRTAP25-1Q3LHN0 102 aa4.42□□□□□ -1.7
TREM2-201ENST00000338469 DSTQ03001 7570 aaKnown RBP4.4□□□□□ -1.7
TREM2-201ENST00000338469 KRTAP19-7Q3SYF9 63 aa4.37□□□□□ -1.71
TREM2-201ENST00000338469 LCE3AQ5TA76 89 aa4.35□□□□□ -1.71
TREM2-201ENST00000338469 MT1EP04732 61 aa4.31□□□□□ -1.72
TREM2-201ENST00000338469 PRO0628Q9UI54 55 aa4.3□□□□□ -1.72
TREM2-201ENST00000338469 PMAIP1Q13794 54 aa4.29□□□□□ -1.72
TREM2-201ENST00000338469 KRTAP19-3Q7Z4W3 81 aa4.27□□□□□ -1.73
TREM2-201ENST00000338469 KRTAP23-1A1A580 65 aa4.26□□□□□ -1.73
TREM2-201ENST00000338469 KRTAP19-5Q3LI72 72 aa4.26□□□□□ -1.73
TREM2-201ENST00000338469 PP632Q6XCG6 107 aa4.21□□□□□ -1.74
TREM2-201ENST00000338469 KRTAP12-3P60328 96 aa4.18□□□□□ -1.74
TREM2-201ENST00000338469 HMCN1Q96RW7 5635 aa4.16□□□□□ -1.74
TREM2-201ENST00000338469 MT1GP13640 62 aa4.13□□□□□ -1.75
TREM2-201ENST00000338469 AHNAK2Q8IVF2 5795 aa4.12□□□□□ -1.75
TREM2-201ENST00000338469 MT4P47944 62 aa4.12□□□□□ -1.75
TREM2-201ENST00000338469 KRTAP5-10Q6L8G5 202 aa4.12□□□□□ -1.75
TREM2-201ENST00000338469 MT1MQ8N339 61 aa4.11□□□□□ -1.75
TREM2-201ENST00000338469 KRTAP4-3Q9BYR4 195 aa4.1□□□□□ -1.75
TREM2-201ENST00000338469 MT1LQ93083 61 aa4.09□□□□□ -1.75
TREM2-201ENST00000338469 PRAC1Q96KF2 57 aa4.04□□□□□ -1.76
TREM2-201ENST00000338469 KRTAP15-1Q3LI76 137 aa4.03□□□□□ -1.76
TREM2-201ENST00000338469 KTN1-AS1Q86SY8 53 aa4.03□□□□□ -1.76
TREM2-201ENST00000338469 KRTAP5-4Q6L8H1 288 aa4□□□□□ -1.77
TREM2-201ENST00000338469 KRTAP5-7Q6L8G8 165 aa3.99□□□□□ -1.77
TREM2-201ENST00000338469 LCE3CQ5T5A8 94 aa3.89□□□□□ -1.79
TREM2-201ENST00000338469 SPRR5A0A1B0GTR4 108 aa3.85□□□□□ -1.79
TREM2-201ENST00000338469 KRTAP5-5Q701N2 237 aaPredicted RBP3.8□□□□□ -1.8
TREM2-201ENST00000338469 KRTAP20-2Q3LI61 65 aa3.77□□□□□ -1.81
TREM2-201ENST00000338469 SYNE1Q8NF91 8797 aaKnown RBP3.74□□□□□ -1.81
TREM2-201ENST00000338469 KRTAP9-6A8MVA2 160 aa3.64□□□□□ -1.83
TREM2-201ENST00000338469 KRTAP12-4P60329 112 aa3.63□□□□□ -1.83
TREM2-201ENST00000338469 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.61□□□□□ -1.83
TREM2-201ENST00000338469 KRTAP6-1Q3LI64 71 aa3.5□□□□□ -1.85
TREM2-201ENST00000338469 AHNAKQ09666 5890 aaKnown RBP3.5□□□□□ -1.85
TREM2-201ENST00000338469 MUC5ACP98088 5654 aa3.49□□□□□ -1.85
TREM2-201ENST00000338469 KRTAP5-2Q701N4 177 aa3.49□□□□□ -1.85
TREM2-201ENST00000338469 MT1AP04731 61 aa3.48□□□□□ -1.85
TREM2-201ENST00000338469 A0A0A0MQY5 61 aa3.47□□□□□ -1.85
TREM2-201ENST00000338469 KRTAP5-8O75690 187 aa3.44□□□□□ -1.86
TREM2-201ENST00000338469 KRTAP5-11Q6L8G4 156 aa3.44□□□□□ -1.86
TREM2-201ENST00000338469 MUC5BQ9HC84 5762 aaPredicted RBP3.42□□□□□ -1.86
TREM2-201ENST00000338469 LUZP6Q538Z0 58 aa3.36□□□□□ -1.87
TREM2-201ENST00000338469 KRTAP6-2Q3LI66 62 aa3.34□□□□□ -1.87
TREM2-201ENST00000338469 OBSCNQ5VST9 7968 aa3.3□□□□□ -1.88
TREM2-201ENST00000338469 MT3P25713 68 aa3.17□□□□□ -1.9
TREM2-201ENST00000338469 KRTAP5-1Q6L8H4 278 aa3.16□□□□□ -1.9
TREM2-201ENST00000338469 NDUFAF8A1L188 74 aa3.07□□□□□ -1.92
TREM2-201ENST00000338469 LCE1EQ5T753 118 aa3.03□□□□□ -1.92
TREM2-201ENST00000338469 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
TREM2-201ENST00000338469 LCE3DQ9BYE3 92 aa2.88□□□□□ -1.95
TREM2-201ENST00000338469 LCE1BQ5T7P3 118 aa2.78□□□□□ -1.96
TREM2-201ENST00000338469 LCE3EQ5T5B0 92 aa2.77□□□□□ -1.97
TREM2-201ENST00000338469 LCE1CQ5T751 118 aa2.71□□□□□ -1.98
TREM2-201ENST00000338469 INE1O15225 51 aa2.53□□□□□ -2
TREM2-201ENST00000338469 PHGR1C9JFL3 82 aa2.41□□□□□ -2.02
TREM2-201ENST00000338469 LCE1FQ5T754 118 aa2.4□□□□□ -2.03
TREM2-201ENST00000338469 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
TREM2-201ENST00000338469 PRM1P04553 51 aa2.28□□□□□ -2.04
TREM2-201ENST00000338469 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
TREM2-201ENST00000338469 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
TREM2-201ENST00000338469 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 63.8 ms