RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 LCE4AQ5TA78 99 aa3.04□□□□□ -1.92
CSTF3-201ENST00000323959 SPINT4Q6UDR6 99 aa3.03□□□□□ -1.92
CSTF3-201ENST00000323959 NDUFAF8A1L188 74 aa3□□□□□ -1.93
CSTF3-201ENST00000323959 CRIPTQ9P021 101 aa2.99□□□□□ -1.93
CSTF3-201ENST00000323959 KRTAP15-1Q3LI76 137 aa2.99□□□□□ -1.93
CSTF3-201ENST00000323959 KRTAP19-8Q3LI54 63 aa2.98□□□□□ -1.93
CSTF3-201ENST00000323959 KRTAP4-8Q9BYQ9 185 aa2.97□□□□□ -1.93
CSTF3-201ENST00000323959 M0QZ58 72 aa2.95□□□□□ -1.94
CSTF3-201ENST00000323959 MUC5ACP98088 5654 aa2.95□□□□□ -1.94
CSTF3-201ENST00000323959 MT4P47944 62 aa2.94□□□□□ -1.94
CSTF3-201ENST00000323959 LUZP6Q538Z0 58 aa2.88□□□□□ -1.95
CSTF3-201ENST00000323959 KRTAP13-4Q3LI77 160 aa2.87□□□□□ -1.95
CSTF3-201ENST00000323959 KRTAP12-2P59991 146 aa2.86□□□□□ -1.95
CSTF3-201ENST00000323959 C10orf95Q9H7T3 257 aa2.86□□□□□ -1.95
CSTF3-201ENST00000323959 SPRR2GQ9BYE4 73 aa2.83□□□□□ -1.96
CSTF3-201ENST00000323959 A0A0D9SG42 100 aa2.82□□□□□ -1.96
CSTF3-201ENST00000323959 KRTAP12-1P59990 96 aa2.8□□□□□ -1.96
CSTF3-201ENST00000323959 KRTAP5-4Q6L8H1 288 aa2.8□□□□□ -1.96
CSTF3-201ENST00000323959 R4GN34 69 aa2.79□□□□□ -1.96
CSTF3-201ENST00000323959 PRO2289Q9P1D8 64 aa2.78□□□□□ -1.96
CSTF3-201ENST00000323959 KRTAP4-12Q9BQ66 201 aa2.78□□□□□ -1.97
CSTF3-201ENST00000323959 KRTAP4-8A0A0G2JLE6 195 aa2.76□□□□□ -1.97
CSTF3-201ENST00000323959 KRTAP9-9Q9BYP9 154 aa2.76□□□□□ -1.97
CSTF3-201ENST00000323959 KRTAP9-4Q9BYQ2 154 aa2.76□□□□□ -1.97
CSTF3-201ENST00000323959 PLAC4Q8WY50 150 aa2.73□□□□□ -1.97
CSTF3-201ENST00000323959 KRTAP23-1A1A580 65 aa2.72□□□□□ -1.97
CSTF3-201ENST00000323959 LCE5AQ5TCM9 118 aa2.69□□□□□ -1.98
CSTF3-201ENST00000323959 KRTAP4-7Q9BYR0 210 aa2.67□□□□□ -1.98
CSTF3-201ENST00000323959 KRTAP20-2Q3LI61 65 aa2.64□□□□□ -1.99
CSTF3-201ENST00000323959 CAMK2N1Q7Z7J9 78 aa2.64□□□□□ -1.99
CSTF3-201ENST00000323959 MT1XP80297 61 aa2.64□□□□□ -1.99
CSTF3-201ENST00000323959 PP632Q6XCG6 107 aa2.63□□□□□ -1.99
CSTF3-201ENST00000323959 KRTAP4-11Q9BYQ6 195 aa2.61□□□□□ -1.99
CSTF3-201ENST00000323959 KRTAP5-8O75690 187 aa2.6□□□□□ -1.99
CSTF3-201ENST00000323959 KRTAP19-3Q7Z4W3 81 aa2.57□□□□□ -2
CSTF3-201ENST00000323959 TNP1P09430 55 aa2.56□□□□□ -2
CSTF3-201ENST00000323959 KRTAP10-12P60413 245 aa2.55□□□□□ -2
CSTF3-201ENST00000323959 KRTAP4-2Q9BYR5 136 aa2.54□□□□□ -2
CSTF3-201ENST00000323959 KRTAP10-7P60409 375 aaPredicted RBP2.49□□□□□ -2.01
CSTF3-201ENST00000323959 INE1O15225 51 aa2.48□□□□□ -2.01
CSTF3-201ENST00000323959 KRTAP19-4Q3LI73 84 aa2.45□□□□□ -2.02
CSTF3-201ENST00000323959 MT1GP13640 62 aa2.44□□□□□ -2.02
CSTF3-201ENST00000323959 KRTAP5-2Q701N4 177 aa2.44□□□□□ -2.02
CSTF3-201ENST00000323959 KRTAP12-4P60329 112 aa2.43□□□□□ -2.02
CSTF3-201ENST00000323959 MT1EP04732 61 aa2.42□□□□□ -2.02
CSTF3-201ENST00000323959 LCE3AQ5TA76 89 aa2.4□□□□□ -2.03
CSTF3-201ENST00000323959 KRTAP19-7Q3SYF9 63 aa2.36□□□□□ -2.03
CSTF3-201ENST00000323959 MT1MQ8N339 61 aa2.36□□□□□ -2.03
CSTF3-201ENST00000323959 KRTAP12-3P60328 96 aa2.33□□□□□ -2.04
CSTF3-201ENST00000323959 KRTAP19-5Q3LI72 72 aa2.28□□□□□ -2.04
CSTF3-201ENST00000323959 KRTAP5-5Q701N2 237 aaPredicted RBP2.26□□□□□ -2.05
CSTF3-201ENST00000323959 SYNE1Q8NF91 8797 aaKnown RBP2.24□□□□□ -2.05
CSTF3-201ENST00000323959 MT1LQ93083 61 aa2.22□□□□□ -2.05
CSTF3-201ENST00000323959 LCE3CQ5T5A8 94 aa2.21□□□□□ -2.05
CSTF3-201ENST00000323959 KRTAP4-3Q9BYR4 195 aa2.2□□□□□ -2.06
CSTF3-201ENST00000323959 KRTAP5-1Q6L8H4 278 aa2.16□□□□□ -2.06
CSTF3-201ENST00000323959 KRTAP9-6A8MVA2 160 aa2.04□□□□□ -2.08
CSTF3-201ENST00000323959 PHGR1C9JFL3 82 aa1.99□□□□□ -2.09
CSTF3-201ENST00000323959 LCE1FQ5T754 118 aa1.93□□□□□ -2.1
CSTF3-201ENST00000323959 MT1AP04731 61 aa1.92□□□□□ -2.1
CSTF3-201ENST00000323959 KRTAP6-2Q3LI66 62 aa1.91□□□□□ -2.1
CSTF3-201ENST00000323959 KRTAP5-11Q6L8G4 156 aa1.88□□□□□ -2.11
CSTF3-201ENST00000323959 LCE1EQ5T753 118 aa1.86□□□□□ -2.11
CSTF3-201ENST00000323959 KRTAP6-1Q3LI64 71 aa1.82□□□□□ -2.12
CSTF3-201ENST00000323959 MT3P25713 68 aa1.76□□□□□ -2.13
CSTF3-201ENST00000323959 OBSCNQ5VST9 7968 aa1.73□□□□□ -2.13
CSTF3-201ENST00000323959 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.73□□□□□ -2.13
CSTF3-201ENST00000323959 LCE3EQ5T5B0 92 aa1.72□□□□□ -2.13
CSTF3-201ENST00000323959 LCE1CQ5T751 118 aa1.69□□□□□ -2.14
CSTF3-201ENST00000323959 LCE1BQ5T7P3 118 aa1.69□□□□□ -2.14
CSTF3-201ENST00000323959 LCE3DQ9BYE3 92 aa1.64□□□□□ -2.15
CSTF3-201ENST00000323959 PRM1P04553 51 aa1.61□□□□□ -2.15
CSTF3-201ENST00000323959 KRTAP21-1Q3LI58 79 aa1.6□□□□□ -2.15
CSTF3-201ENST00000323959 KRTAP4-4Q9BYR3 166 aa1.44□□□□□ -2.18
CSTF3-201ENST00000323959 KRTAP21-2Q3LI59 83 aa1.37□□□□□ -2.19
CSTF3-201ENST00000323959 MUC19Q7Z5P9 8384 aa1.26□□□□□ -2.21
CSTF3-201ENST00000323959 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 8.5 ms