RNA–Protein interactions for RNA: ENST00000239852.10

MTRF1-201, Transcript of mitochondrial translation release factor 1, humanhuman

TSL 1 (best)

Gene MTRF1, Length 1,561 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTRF1-201ENST00000239852 KRTAP5-4Q6L8H1 288 aa3.68□□□□□ -1.82
MTRF1-201ENST00000239852 KRTAP13-1Q8IUC0 172 aa3.67□□□□□ -1.82
MTRF1-201ENST00000239852 C10orf95Q9H7T3 257 aa3.66□□□□□ -1.82
MTRF1-201ENST00000239852 SPRR1BP22528 89 aa3.61□□□□□ -1.83
MTRF1-201ENST00000239852 KRTAP13-2Q52LG2 175 aa3.53□□□□□ -1.84
MTRF1-201ENST00000239852 KRTAP5-1Q6L8H4 278 aa3.52□□□□□ -1.85
MTRF1-201ENST00000239852 KRTAP10-7P60409 375 aaPredicted RBP3.51□□□□□ -1.85
MTRF1-201ENST00000239852 KRTAP4-4Q9BYR3 166 aa3.51□□□□□ -1.85
MTRF1-201ENST00000239852 SPRR5A0A1B0GTR4 108 aa3.5□□□□□ -1.85
MTRF1-201ENST00000239852 MT2AP02795 61 aa3.47□□□□□ -1.85
MTRF1-201ENST00000239852 S4R3F8 94 aa3.46□□□□□ -1.85
MTRF1-201ENST00000239852 AHNAK2Q8IVF2 5795 aa3.45□□□□□ -1.86
MTRF1-201ENST00000239852 SPINK1P00995 79 aa3.44□□□□□ -1.86
MTRF1-201ENST00000239852 MT1FP04733 61 aa3.44□□□□□ -1.86
MTRF1-201ENST00000239852 KRTAP10-10P60014 251 aa3.41□□□□□ -1.86
MTRF1-201ENST00000239852 SPRR2EP22531 72 aa3.39□□□□□ -1.87
MTRF1-201ENST00000239852 SPRR2BP35325 72 aa3.39□□□□□ -1.87
MTRF1-201ENST00000239852 SPRR2AP35326 72 aa3.39□□□□□ -1.87
MTRF1-201ENST00000239852 DSTQ03001 7570 aaKnown RBP3.39□□□□□ -1.87
MTRF1-201ENST00000239852 RPS29P62273 56 aaKnown RBP3.37□□□□□ -1.87
MTRF1-201ENST00000239852 HMCN1Q96RW7 5635 aa3.36□□□□□ -1.87
MTRF1-201ENST00000239852 KRTAP5-10Q6L8G5 202 aa3.32□□□□□ -1.88
MTRF1-201ENST00000239852 KRTAP5-7Q6L8G8 165 aa3.31□□□□□ -1.88
MTRF1-201ENST00000239852 KRTAP5-2Q701N4 177 aa3.3□□□□□ -1.88
MTRF1-201ENST00000239852 SPRR2DP22532 72 aa3.29□□□□□ -1.88
MTRF1-201ENST00000239852 C9orf92A6NGG3 77 aa3.27□□□□□ -1.89
MTRF1-201ENST00000239852 KRTAP13-4Q3LI77 160 aa3.27□□□□□ -1.89
MTRF1-201ENST00000239852 A0A0D9SG42 100 aa3.26□□□□□ -1.89
MTRF1-201ENST00000239852 KRTAP12-1P59990 96 aa3.25□□□□□ -1.89
MTRF1-201ENST00000239852 LCE1AQ5T7P2 110 aa3.25□□□□□ -1.89
MTRF1-201ENST00000239852 SPRR2FQ96RM1 72 aa3.25□□□□□ -1.89
MTRF1-201ENST00000239852 M0QZ58 72 aa3.19□□□□□ -1.9
MTRF1-201ENST00000239852 AHNAKQ09666 5890 aaKnown RBP3.16□□□□□ -1.9
MTRF1-201ENST00000239852 LCE1EQ5T753 118 aa3.14□□□□□ -1.91
MTRF1-201ENST00000239852 KRTAP10-5P60370 271 aa3.06□□□□□ -1.92
MTRF1-201ENST00000239852 MT3P25713 68 aa3.03□□□□□ -1.92
MTRF1-201ENST00000239852 KRTAP5-8O75690 187 aa3.02□□□□□ -1.93
MTRF1-201ENST00000239852 MUC5BQ9HC84 5762 aaPredicted RBP3.02□□□□□ -1.93
MTRF1-201ENST00000239852 KRTAP8-1Q8IUC2 63 aa2.96□□□□□ -1.94
MTRF1-201ENST00000239852 MUC5ACP98088 5654 aa2.96□□□□□ -1.94
MTRF1-201ENST00000239852 MT4P47944 62 aa2.94□□□□□ -1.94
MTRF1-201ENST00000239852 MT1BP07438 61 aa2.93□□□□□ -1.94
MTRF1-201ENST00000239852 KRTAP4-3Q9BYR4 195 aa2.91□□□□□ -1.94
MTRF1-201ENST00000239852 OBSCNQ5VST9 7968 aa2.91□□□□□ -1.94
MTRF1-201ENST00000239852 TNP1P09430 55 aa2.86□□□□□ -1.95
MTRF1-201ENST00000239852 KRTAP19-8Q3LI54 63 aa2.81□□□□□ -1.96
MTRF1-201ENST00000239852 LCE1FQ5T754 118 aa2.78□□□□□ -1.96
MTRF1-201ENST00000239852 KRTAP12-4P60329 112 aa2.74□□□□□ -1.97
MTRF1-201ENST00000239852 SPRR2GQ9BYE4 73 aa2.7□□□□□ -1.98
MTRF1-201ENST00000239852 KRTAP9-6A8MVA2 160 aa2.6□□□□□ -1.99
MTRF1-201ENST00000239852 KRTAP20-2Q3LI61 65 aa2.57□□□□□ -2
MTRF1-201ENST00000239852 MT1XP80297 61 aa2.55□□□□□ -2
MTRF1-201ENST00000239852 KRTAP10-12P60413 245 aa2.54□□□□□ -2
MTRF1-201ENST00000239852 LCE3CQ5T5A8 94 aa2.52□□□□□ -2.01
MTRF1-201ENST00000239852 KRTAP19-3Q7Z4W3 81 aa2.48□□□□□ -2.01
MTRF1-201ENST00000239852 KRTAP12-3P60328 96 aa2.45□□□□□ -2.02
MTRF1-201ENST00000239852 SYNE1Q8NF91 8797 aaKnown RBP2.44□□□□□ -2.02
MTRF1-201ENST00000239852 MT1GP13640 62 aa2.33□□□□□ -2.04
MTRF1-201ENST00000239852 LCE3AQ5TA76 89 aa2.33□□□□□ -2.04
MTRF1-201ENST00000239852 MT1EP04732 61 aa2.32□□□□□ -2.04
MTRF1-201ENST00000239852 LCE3EQ5T5B0 92 aa2.31□□□□□ -2.04
MTRF1-201ENST00000239852 KRTAP19-7Q3SYF9 63 aa2.29□□□□□ -2.04
MTRF1-201ENST00000239852 MT1MQ8N339 61 aa2.27□□□□□ -2.05
MTRF1-201ENST00000239852 KRTAP19-5Q3LI72 72 aa2.23□□□□□ -2.05
MTRF1-201ENST00000239852 LCE3DQ9BYE3 92 aa2.21□□□□□ -2.06
MTRF1-201ENST00000239852 KRTAP5-5Q701N2 237 aaPredicted RBP2.16□□□□□ -2.06
MTRF1-201ENST00000239852 PRM1P04553 51 aa2.14□□□□□ -2.07
MTRF1-201ENST00000239852 MT1LQ93083 61 aa2.12□□□□□ -2.07
MTRF1-201ENST00000239852 MT1AP04731 61 aa2□□□□□ -2.09
MTRF1-201ENST00000239852 LCE1CQ5T751 118 aa1.98□□□□□ -2.09
MTRF1-201ENST00000239852 LCE1BQ5T7P3 118 aa1.98□□□□□ -2.09
MTRF1-201ENST00000239852 PHGR1C9JFL3 82 aa1.97□□□□□ -2.09
MTRF1-201ENST00000239852 KRTAP6-2Q3LI66 62 aa1.87□□□□□ -2.11
MTRF1-201ENST00000239852 KRTAP6-1Q3LI64 71 aa1.8□□□□□ -2.12
MTRF1-201ENST00000239852 MUC19Q7Z5P9 8384 aa1.78□□□□□ -2.12
MTRF1-201ENST00000239852 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.16
MTRF1-201ENST00000239852 KRTAP21-2Q3LI59 83 aa1.48□□□□□ -2.17
MTRF1-201ENST00000239852 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 130 ms