RNA–Protein interactions for RNA: ENST00000641588.1

CASC19-243, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-243ENST00000641588 MT3P25713 68 aa3.55□□□□□ -1.84
CASC19-243ENST00000641588 KRTAP13-4Q3LI77 160 aa3.55□□□□□ -1.84
CASC19-243ENST00000641588 KRTAP1-4P0C5Y4 121 aa3.53□□□□□ -1.84
CASC19-243ENST00000641588 M0QZ58 72 aa3.52□□□□□ -1.85
CASC19-243ENST00000641588 DNHD1Q96M86 4753 aa3.51□□□□□ -1.85
CASC19-243ENST00000641588 KRTAP12-1P59990 96 aa3.51□□□□□ -1.85
CASC19-243ENST00000641588 KRTAP5-11Q6L8G4 156 aa3.51□□□□□ -1.85
CASC19-243ENST00000641588 MEGF8Q7Z7M0 2845 aa3.51□□□□□ -1.85
CASC19-243ENST00000641588 TRRAPQ9Y4A5 3859 aa3.5□□□□□ -1.85
CASC19-243ENST00000641588 TGP01266 2768 aa3.5□□□□□ -1.85
CASC19-243ENST00000641588 KRTAP12-2P59991 146 aa3.5□□□□□ -1.85
CASC19-243ENST00000641588 ANK2Q01484 3957 aa3.5□□□□□ -1.85
CASC19-243ENST00000641588 NBEAL1Q6ZS30 2694 aa3.5□□□□□ -1.85
CASC19-243ENST00000641588 DNAH8Q96JB1 4490 aa3.49□□□□□ -1.85
CASC19-243ENST00000641588 MGAM2Q2M2H8 2515 aa3.49□□□□□ -1.85
CASC19-243ENST00000641588 KRTAP2-2Q9BYT5 123 aa3.48□□□□□ -1.85
CASC19-243ENST00000641588 PP632Q6XCG6 107 aa3.47□□□□□ -1.85
CASC19-243ENST00000641588 NOTCH1P46531 2555 aa3.47□□□□□ -1.85
CASC19-243ENST00000641588 DNAH3Q8TD57 4116 aa3.47□□□□□ -1.85
CASC19-243ENST00000641588 KRTAP21-3Q3LHN1 58 aa3.46□□□□□ -1.86
CASC19-243ENST00000641588 VPS13DQ5THJ4 4388 aa3.46□□□□□ -1.86
CASC19-243ENST00000641588 STAB2Q8WWQ8 2551 aa3.46□□□□□ -1.86
CASC19-243ENST00000641588 PRO2289Q9P1D8 64 aa3.43□□□□□ -1.86
CASC19-243ENST00000641588 CMYA5Q8N3K9 4069 aa3.42□□□□□ -1.86
CASC19-243ENST00000641588 DNAH10Q8IVF4 4471 aa3.42□□□□□ -1.86
CASC19-243ENST00000641588 KRTAP5-4Q6L8H1 288 aa3.42□□□□□ -1.86
CASC19-243ENST00000641588 DYNC2H1Q8NCM8 4307 aaKnown RBP3.4□□□□□ -1.86
CASC19-243ENST00000641588 FRAS1Q86XX4 4008 aa3.4□□□□□ -1.87
CASC19-243ENST00000641588 KRTAP10-7P60409 375 aaPredicted RBP3.39□□□□□ -1.87
CASC19-243ENST00000641588 COL7A1Q02388 2944 aa3.39□□□□□ -1.87
CASC19-243ENST00000641588 C9orf92A6NGG3 77 aa3.39□□□□□ -1.87
CASC19-243ENST00000641588 DNAH17Q9UFH2 4485 aa3.38□□□□□ -1.87
CASC19-243ENST00000641588 HUWE1Q7Z6Z7 4374 aaKnown RBP3.38□□□□□ -1.87
CASC19-243ENST00000641588 DMBT1Q9UGM3 2413 aaPredicted RBP3.38□□□□□ -1.87
CASC19-243ENST00000641588 FBN3Q75N90 2809 aa3.37□□□□□ -1.87
CASC19-243ENST00000641588 KRTAP5-1Q6L8H4 278 aa3.37□□□□□ -1.87
CASC19-243ENST00000641588 LYSTQ99698 3801 aa3.37□□□□□ -1.87
CASC19-243ENST00000641588 DNAH9Q9NYC9 4486 aa3.35□□□□□ -1.87
CASC19-243ENST00000641588 PRKDCP78527 4128 aaKnown RBP3.34□□□□□ -1.87
CASC19-243ENST00000641588 INE1O15225 51 aa3.34□□□□□ -1.88
CASC19-243ENST00000641588 SPRR5A0A1B0GTR4 108 aa3.31□□□□□ -1.88
CASC19-243ENST00000641588 KRTAP4-4Q9BYR3 166 aa3.31□□□□□ -1.88
CASC19-243ENST00000641588 CSMD3Q7Z407 3707 aa3.31□□□□□ -1.88
CASC19-243ENST00000641588 KRTAP10-1P60331 282 aa3.3□□□□□ -1.88
CASC19-243ENST00000641588 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
CASC19-243ENST00000641588 HECTD4Q9Y4D8 3996 aa3.3□□□□□ -1.88
CASC19-243ENST00000641588 DNAH6Q9C0G6 4158 aa3.29□□□□□ -1.88
CASC19-243ENST00000641588 DNAH11Q96DT5 4516 aa3.28□□□□□ -1.88
CASC19-243ENST00000641588 DNAH7Q8WXX0 4024 aa3.28□□□□□ -1.88
CASC19-243ENST00000641588 DNAH2Q9P225 4427 aa3.28□□□□□ -1.88
CASC19-243ENST00000641588 KRTAP10-8P60410 259 aa3.27□□□□□ -1.89
CASC19-243ENST00000641588 SACSQ9NZJ4 4579 aa3.23□□□□□ -1.89
CASC19-243ENST00000641588 R4GN34 69 aa3.22□□□□□ -1.89
CASC19-243ENST00000641588 PLECQ15149 4684 aaKnown RBP3.18□□□□□ -1.9
CASC19-243ENST00000641588 STARD9Q9P2P6 4700 aa3.16□□□□□ -1.9
CASC19-243ENST00000641588 Q5VSD8 79 aa3.16□□□□□ -1.9
CASC19-243ENST00000641588 KRTAP10-12P60413 245 aa3.15□□□□□ -1.9
CASC19-243ENST00000641588 LRP1BQ9NZR2 4599 aa3.13□□□□□ -1.91
CASC19-243ENST00000641588 PKHD1L1Q86WI1 4243 aa3.12□□□□□ -1.91
CASC19-243ENST00000641588 KMT2CQ8NEZ4 4911 aaKnown RBP3.12□□□□□ -1.91
CASC19-243ENST00000641588 TNP1P09430 55 aa3.12□□□□□ -1.91
CASC19-243ENST00000641588 KRTAP10-4P60372 401 aaPredicted RBP3.09□□□□□ -1.91
CASC19-243ENST00000641588 DNAH5Q8TE73 4624 aa3.09□□□□□ -1.92
CASC19-243ENST00000641588 KMT2AQ03164 3969 aa3.08□□□□□ -1.92
CASC19-243ENST00000641588 LCE3CQ5T5A8 94 aa3.08□□□□□ -1.92
CASC19-243ENST00000641588 VPS13BQ7Z7G8 4022 aa3.07□□□□□ -1.92
CASC19-243ENST00000641588 HYDINQ4G0P3 5121 aa3.06□□□□□ -1.92
CASC19-243ENST00000641588 RYR3Q15413 4870 aa3.05□□□□□ -1.92
CASC19-243ENST00000641588 RYR2Q92736 4967 aa3.05□□□□□ -1.92
CASC19-243ENST00000641588 LRP1Q07954 4544 aaKnown RBP3.03□□□□□ -1.92
CASC19-243ENST00000641588 PKHD1P08F94 4074 aa3.02□□□□□ -1.93
CASC19-243ENST00000641588 MYCBP2O75592 4640 aa3.01□□□□□ -1.93
CASC19-243ENST00000641588 A0A1B0GVY2 172 aa3.01□□□□□ -1.93
CASC19-243ENST00000641588 FAT2Q9NYQ8 4349 aa3.01□□□□□ -1.93
CASC19-243ENST00000641588 APOBP04114 4563 aaKnown RBP3.01□□□□□ -1.93
CASC19-243ENST00000641588 SMR3BP02814 79 aaPredicted RBP3□□□□□ -1.93
CASC19-243ENST00000641588 KRTAP10-5P60370 271 aa2.98□□□□□ -1.93
CASC19-243ENST00000641588 LCE1EQ5T753 118 aa2.98□□□□□ -1.93
CASC19-243ENST00000641588 KRTAP5-2Q701N4 177 aa2.98□□□□□ -1.93
CASC19-243ENST00000641588 PKD1P98161 4303 aa2.97□□□□□ -1.93
CASC19-243ENST00000641588 DYNC1H1Q14204 4646 aaKnown RBP2.96□□□□□ -1.93
CASC19-243ENST00000641588 TNXBP22105 4242 aa2.96□□□□□ -1.94
CASC19-243ENST00000641588 EPPK1P58107 5090 aaKnown RBP2.93□□□□□ -1.94
CASC19-243ENST00000641588 FAT3Q8TDW7 4589 aa2.91□□□□□ -1.94
CASC19-243ENST00000641588 HSPG2P98160 4391 aa2.9□□□□□ -1.94
CASC19-243ENST00000641588 FAT1Q14517 4588 aa2.88□□□□□ -1.95
CASC19-243ENST00000641588 KIAA1109Q2LD37 5005 aa2.87□□□□□ -1.95
CASC19-243ENST00000641588 OBSCNQ5VST9 7968 aa2.86□□□□□ -1.95
CASC19-243ENST00000641588 BIRC6Q9NR09 4857 aa2.86□□□□□ -1.95
CASC19-243ENST00000641588 RYR1P21817 5038 aa2.84□□□□□ -1.95
CASC19-243ENST00000641588 KRTAP8-1Q8IUC2 63 aa2.83□□□□□ -1.96
CASC19-243ENST00000641588 KRTAP4-3Q9BYR4 195 aa2.82□□□□□ -1.96
CASC19-243ENST00000641588 PCLOQ9Y6V0 5065 aa2.82□□□□□ -1.96
CASC19-243ENST00000641588 HERC2O95714 4834 aa2.81□□□□□ -1.96
CASC19-243ENST00000641588 LCE3EQ5T5B0 92 aa2.8□□□□□ -1.96
CASC19-243ENST00000641588 KRTAP10-10P60014 251 aa2.78□□□□□ -1.96
CASC19-243ENST00000641588 MT1HL1P0DM35 61 aa2.78□□□□□ -1.97
CASC19-243ENST00000641588 UBR4Q5T4S7 5183 aa2.77□□□□□ -1.97
CASC19-243ENST00000641588 LCE3AQ5TA76 89 aa2.77□□□□□ -1.97
CASC19-243ENST00000641588 FLGP20930 4061 aaPredicted RBP2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms