RNA–Protein interactions for RNA: ENST00000641013.1

CASC19-205, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,411 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-205ENST00000641013 VWFP04275 2813 aa4.06□□□□□ -1.76
CASC19-205ENST00000641013 NOTCH1P46531 2555 aa4.04□□□□□ -1.76
CASC19-205ENST00000641013 VPS13DQ5THJ4 4388 aa4.04□□□□□ -1.76
CASC19-205ENST00000641013 C10orf95Q9H7T3 257 aa4.04□□□□□ -1.76
CASC19-205ENST00000641013 PRKDCP78527 4128 aaKnown RBP4.04□□□□□ -1.76
CASC19-205ENST00000641013 DNAH3Q8TD57 4116 aa4.04□□□□□ -1.76
CASC19-205ENST00000641013 DNAH8Q96JB1 4490 aa4.03□□□□□ -1.77
CASC19-205ENST00000641013 SRRM2Q9UQ35 2752 aaKnown RBP4.02□□□□□ -1.77
CASC19-205ENST00000641013 KRTAP13-4Q3LI77 160 aa4.02□□□□□ -1.77
CASC19-205ENST00000641013 A0A0D9SG42 100 aa4.01□□□□□ -1.77
CASC19-205ENST00000641013 M0QZ58 72 aa4.01□□□□□ -1.77
CASC19-205ENST00000641013 FLG2Q5D862 2391 aaPredicted RBP3.99□□□□□ -1.77
CASC19-205ENST00000641013 PLAC4Q8WY50 150 aa3.99□□□□□ -1.77
CASC19-205ENST00000641013 KRTAP12-1P59990 96 aa3.97□□□□□ -1.77
CASC19-205ENST00000641013 DYNC2H1Q8NCM8 4307 aaKnown RBP3.97□□□□□ -1.77
CASC19-205ENST00000641013 DNAH10Q8IVF4 4471 aa3.97□□□□□ -1.77
CASC19-205ENST00000641013 CAMK2N1Q7Z7J9 78 aa3.96□□□□□ -1.77
CASC19-205ENST00000641013 HUWE1Q7Z6Z7 4374 aaKnown RBP3.96□□□□□ -1.78
CASC19-205ENST00000641013 TENM3Q9P273 2699 aa3.96□□□□□ -1.78
CASC19-205ENST00000641013 KRTAP12-2P59991 146 aa3.95□□□□□ -1.78
CASC19-205ENST00000641013 DNAH9Q9NYC9 4486 aa3.95□□□□□ -1.78
CASC19-205ENST00000641013 LYSTQ99698 3801 aa3.95□□□□□ -1.78
CASC19-205ENST00000641013 FRAS1Q86XX4 4008 aa3.94□□□□□ -1.78
CASC19-205ENST00000641013 PP632Q6XCG6 107 aa3.94□□□□□ -1.78
CASC19-205ENST00000641013 DNAH17Q9UFH2 4485 aa3.9□□□□□ -1.79
CASC19-205ENST00000641013 C9orf92A6NGG3 77 aa3.89□□□□□ -1.79
CASC19-205ENST00000641013 COL7A1Q02388 2944 aa3.88□□□□□ -1.79
CASC19-205ENST00000641013 KMT2CQ8NEZ4 4911 aaKnown RBP3.88□□□□□ -1.79
CASC19-205ENST00000641013 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.87□□□□□ -1.79
CASC19-205ENST00000641013 CSMD3Q7Z407 3707 aa3.86□□□□□ -1.79
CASC19-205ENST00000641013 DNAH7Q8WXX0 4024 aa3.84□□□□□ -1.79
CASC19-205ENST00000641013 KRTAP10-1P60331 282 aa3.84□□□□□ -1.79
CASC19-205ENST00000641013 RYR3Q15413 4870 aa3.83□□□□□ -1.8
CASC19-205ENST00000641013 HECTD4Q9Y4D8 3996 aa3.81□□□□□ -1.8
CASC19-205ENST00000641013 STAB2Q8WWQ8 2551 aa3.81□□□□□ -1.8
CASC19-205ENST00000641013 PRO2289Q9P1D8 64 aa3.78□□□□□ -1.8
CASC19-205ENST00000641013 STARD9Q9P2P6 4700 aa3.77□□□□□ -1.81
CASC19-205ENST00000641013 DNAH6Q9C0G6 4158 aa3.77□□□□□ -1.81
CASC19-205ENST00000641013 DNAH11Q96DT5 4516 aa3.76□□□□□ -1.81
CASC19-205ENST00000641013 DNAH2Q9P225 4427 aa3.76□□□□□ -1.81
CASC19-205ENST00000641013 SACSQ9NZJ4 4579 aa3.76□□□□□ -1.81
CASC19-205ENST00000641013 PLECQ15149 4684 aaKnown RBP3.74□□□□□ -1.81
CASC19-205ENST00000641013 SPRR5A0A1B0GTR4 108 aa3.73□□□□□ -1.81
CASC19-205ENST00000641013 RYR2Q92736 4967 aa3.72□□□□□ -1.81
CASC19-205ENST00000641013 INE1O15225 51 aa3.71□□□□□ -1.82
CASC19-205ENST00000641013 EPPK1P58107 5090 aaKnown RBP3.68□□□□□ -1.82
CASC19-205ENST00000641013 KRTAP10-8P60410 259 aa3.68□□□□□ -1.82
CASC19-205ENST00000641013 R4GN34 69 aa3.68□□□□□ -1.82
CASC19-205ENST00000641013 HYDINQ4G0P3 5121 aa3.67□□□□□ -1.82
CASC19-205ENST00000641013 KMT2AQ03164 3969 aa3.66□□□□□ -1.82
CASC19-205ENST00000641013 LCE1AQ5T7P2 110 aa3.65□□□□□ -1.83
CASC19-205ENST00000641013 BIRC6Q9NR09 4857 aa3.64□□□□□ -1.83
CASC19-205ENST00000641013 DNAH5Q8TE73 4624 aa3.64□□□□□ -1.83
CASC19-205ENST00000641013 KRTAP10-4P60372 401 aaPredicted RBP3.62□□□□□ -1.83
CASC19-205ENST00000641013 PKHD1L1Q86WI1 4243 aa3.62□□□□□ -1.83
CASC19-205ENST00000641013 LRP1BQ9NZR2 4599 aa3.62□□□□□ -1.83
CASC19-205ENST00000641013 KRTAP10-7P60409 375 aaPredicted RBP3.59□□□□□ -1.84
CASC19-205ENST00000641013 DMBT1Q9UGM3 2413 aaPredicted RBP3.58□□□□□ -1.84
CASC19-205ENST00000641013 PKHD1P08F94 4074 aa3.56□□□□□ -1.84
CASC19-205ENST00000641013 VPS13BQ7Z7G8 4022 aa3.56□□□□□ -1.84
CASC19-205ENST00000641013 Q5VSD8 79 aa3.55□□□□□ -1.84
CASC19-205ENST00000641013 TNP1P09430 55 aa3.54□□□□□ -1.84
CASC19-205ENST00000641013 FAT2Q9NYQ8 4349 aa3.52□□□□□ -1.85
CASC19-205ENST00000641013 MYCBP2O75592 4640 aa3.51□□□□□ -1.85
CASC19-205ENST00000641013 LRP1Q07954 4544 aaKnown RBP3.51□□□□□ -1.85
CASC19-205ENST00000641013 RYR1P21817 5038 aa3.51□□□□□ -1.85
CASC19-205ENST00000641013 HERC2O95714 4834 aa3.5□□□□□ -1.85
CASC19-205ENST00000641013 SMR3BP02814 79 aaPredicted RBP3.5□□□□□ -1.85
CASC19-205ENST00000641013 KRTAP5-11Q6L8G4 156 aa3.49□□□□□ -1.85
CASC19-205ENST00000641013 PKD1P98161 4303 aa3.48□□□□□ -1.85
CASC19-205ENST00000641013 APOBP04114 4563 aaKnown RBP3.47□□□□□ -1.85
CASC19-205ENST00000641013 KRTAP5-9P26371 169 aa3.46□□□□□ -1.86
CASC19-205ENST00000641013 KIAA1109Q2LD37 5005 aa3.46□□□□□ -1.86
CASC19-205ENST00000641013 PCLOQ9Y6V0 5065 aa3.45□□□□□ -1.86
CASC19-205ENST00000641013 A0A1B0GVY2 172 aa3.44□□□□□ -1.86
CASC19-205ENST00000641013 DYNC1H1Q14204 4646 aaKnown RBP3.44□□□□□ -1.86
CASC19-205ENST00000641013 KRTAP2-2Q9BYT5 123 aa3.43□□□□□ -1.86
CASC19-205ENST00000641013 TNXBP22105 4242 aa3.42□□□□□ -1.86
CASC19-205ENST00000641013 HSPG2P98160 4391 aa3.42□□□□□ -1.86
CASC19-205ENST00000641013 ABCA13Q86UQ4 5058 aa3.42□□□□□ -1.86
CASC19-205ENST00000641013 FAT3Q8TDW7 4589 aa3.42□□□□□ -1.86
CASC19-205ENST00000641013 LCE1EQ5T753 118 aa3.36□□□□□ -1.87
CASC19-205ENST00000641013 FAT1Q14517 4588 aa3.36□□□□□ -1.87
CASC19-205ENST00000641013 HERC1Q15751 4861 aa3.35□□□□□ -1.87
CASC19-205ENST00000641013 KRTAP5-4Q6L8H1 288 aa3.3□□□□□ -1.88
CASC19-205ENST00000641013 MT1HL1P0DM35 61 aa3.27□□□□□ -1.89
CASC19-205ENST00000641013 KRTAP5-1Q6L8H4 278 aa3.27□□□□□ -1.89
CASC19-205ENST00000641013 KRTAP8-1Q8IUC2 63 aa3.23□□□□□ -1.89
CASC19-205ENST00000641013 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
CASC19-205ENST00000641013 MT3P25713 68 aa3.18□□□□□ -1.9
CASC19-205ENST00000641013 KRTAP19-2Q3LHN2 52 aa3.16□□□□□ -1.9
CASC19-205ENST00000641013 LCE3AQ5TA76 89 aa3.15□□□□□ -1.91
CASC19-205ENST00000641013 UBR4Q5T4S7 5183 aa3.15□□□□□ -1.91
CASC19-205ENST00000641013 HMCN2Q8NDA2 5059 aa3.14□□□□□ -1.91
CASC19-205ENST00000641013 SPRR2GQ9BYE4 73 aa3.13□□□□□ -1.91
CASC19-205ENST00000641013 KRTAP10-10P60014 251 aa3.1□□□□□ -1.91
CASC19-205ENST00000641013 FLGP20930 4061 aaPredicted RBP3.1□□□□□ -1.91
CASC19-205ENST00000641013 LRP2P98164 4655 aa3.08□□□□□ -1.92
CASC19-205ENST00000641013 KRTAP10-12P60413 245 aa3.08□□□□□ -1.92
CASC19-205ENST00000641013 RNF213Q63HN8 5207 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms