RNA–Protein interactions for RNA: ENST00000640969.1

KCNMA1-293, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,789 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-293ENST00000640969 KRTAP4-1Q9BYQ7 146 aa7.78□□□□□ -1.16
KCNMA1-293ENST00000640969 CUBNO60494 3623 aa7.77□□□□□ -1.17
KCNMA1-293ENST00000640969 MT1HP80294 61 aa7.75□□□□□ -1.17
KCNMA1-293ENST00000640969 DNAH2Q9P225 4427 aa7.7□□□□□ -1.18
KCNMA1-293ENST00000640969 DNAH5Q8TE73 4624 aa7.68□□□□□ -1.18
KCNMA1-293ENST00000640969 DNAH10Q8IVF4 4471 aa7.67□□□□□ -1.18
KCNMA1-293ENST00000640969 MT2AP02795 61 aa7.66□□□□□ -1.18
KCNMA1-293ENST00000640969 DNAH9Q9NYC9 4486 aa7.64□□□□□ -1.19
KCNMA1-293ENST00000640969 SPRR2GQ9BYE4 73 aa7.63□□□□□ -1.19
KCNMA1-293ENST00000640969 DNAH1Q9P2D7 4330 aa7.59□□□□□ -1.19
KCNMA1-293ENST00000640969 KRTAP19-5Q3LI72 72 aa7.59□□□□□ -1.19
KCNMA1-293ENST00000640969 VPS13CQ709C8 3753 aa7.58□□□□□ -1.2
KCNMA1-293ENST00000640969 DNAH11Q96DT5 4516 aa7.58□□□□□ -1.2
KCNMA1-293ENST00000640969 KRTAP10-7P60409 375 aaPredicted RBP7.52□□□□□ -1.2
KCNMA1-293ENST00000640969 CSMD3Q7Z407 3707 aa7.52□□□□□ -1.21
KCNMA1-293ENST00000640969 LCE3CQ5T5A8 94 aa7.51□□□□□ -1.21
KCNMA1-293ENST00000640969 BSNQ9UPA5 3926 aa7.51□□□□□ -1.21
KCNMA1-293ENST00000640969 SPRR2FQ96RM1 72 aa7.5□□□□□ -1.21
KCNMA1-293ENST00000640969 MT1FP04733 61 aa7.49□□□□□ -1.21
KCNMA1-293ENST00000640969 PLECQ15149 4684 aaKnown RBP7.47□□□□□ -1.21
KCNMA1-293ENST00000640969 DNAH17Q9UFH2 4485 aa7.37□□□□□ -1.23
KCNMA1-293ENST00000640969 AKAP9Q99996 3911 aa7.37□□□□□ -1.23
KCNMA1-293ENST00000640969 FAT1Q14517 4588 aa7.29□□□□□ -1.24
KCNMA1-293ENST00000640969 DNHD1Q96M86 4753 aa7.29□□□□□ -1.24
KCNMA1-293ENST00000640969 DNAH8Q96JB1 4490 aa7.28□□□□□ -1.24
KCNMA1-293ENST00000640969 VPS13DQ5THJ4 4388 aa7.26□□□□□ -1.25
KCNMA1-293ENST00000640969 KRTAP19-4Q3LI73 84 aa7.2□□□□□ -1.26
KCNMA1-293ENST00000640969 DYNC1H1Q14204 4646 aaKnown RBP7.19□□□□□ -1.26
KCNMA1-293ENST00000640969 SACSQ9NZJ4 4579 aa7.19□□□□□ -1.26
KCNMA1-293ENST00000640969 DNAH3Q8TD57 4116 aa7.18□□□□□ -1.26
KCNMA1-293ENST00000640969 LRP1BQ9NZR2 4599 aa7.15□□□□□ -1.26
KCNMA1-293ENST00000640969 FAT2Q9NYQ8 4349 aa7.14□□□□□ -1.27
KCNMA1-293ENST00000640969 DYNC2H1Q8NCM8 4307 aaKnown RBP7.08□□□□□ -1.28
KCNMA1-293ENST00000640969 LCE3BQ5TA77 95 aa7.07□□□□□ -1.28
KCNMA1-293ENST00000640969 SPRR2EP22531 72 aa7.04□□□□□ -1.28
KCNMA1-293ENST00000640969 SPRR2BP35325 72 aa7.04□□□□□ -1.28
KCNMA1-293ENST00000640969 SPRR2AP35326 72 aa7.04□□□□□ -1.28
KCNMA1-293ENST00000640969 KRTAP19-8Q3LI54 63 aa7□□□□□ -1.29
KCNMA1-293ENST00000640969 ZNF469Q96JG9 3925 aaPredicted RBP7□□□□□ -1.29
KCNMA1-293ENST00000640969 RYR1P21817 5038 aa6.98□□□□□ -1.29
KCNMA1-293ENST00000640969 KRTAP19-1Q8IUB9 90 aa6.96□□□□□ -1.3
KCNMA1-293ENST00000640969 APOBP04114 4563 aaKnown RBP6.96□□□□□ -1.3
KCNMA1-293ENST00000640969 STARD9Q9P2P6 4700 aa6.95□□□□□ -1.3
KCNMA1-293ENST00000640969 ANK2Q01484 3957 aa6.95□□□□□ -1.3
KCNMA1-293ENST00000640969 MT1GP13640 62 aa6.93□□□□□ -1.3
KCNMA1-293ENST00000640969 MT1XP80297 61 aa6.91□□□□□ -1.3
KCNMA1-293ENST00000640969 KRTAP12-4P60329 112 aa6.91□□□□□ -1.3
KCNMA1-293ENST00000640969 CMYA5Q8N3K9 4069 aa6.81□□□□□ -1.32
KCNMA1-293ENST00000640969 SPRR2DP22532 72 aa6.81□□□□□ -1.32
KCNMA1-293ENST00000640969 VPS13BQ7Z7G8 4022 aa6.79□□□□□ -1.32
KCNMA1-293ENST00000640969 LRP1Q07954 4544 aaKnown RBP6.78□□□□□ -1.32
KCNMA1-293ENST00000640969 PRKDCP78527 4128 aaKnown RBP6.77□□□□□ -1.33
KCNMA1-293ENST00000640969 MT1BP07438 61 aa6.76□□□□□ -1.33
KCNMA1-293ENST00000640969 DNAH7Q8WXX0 4024 aa6.76□□□□□ -1.33
KCNMA1-293ENST00000640969 LCE2BO14633 110 aa6.75□□□□□ -1.33
KCNMA1-293ENST00000640969 FAT3Q8TDW7 4589 aa6.72□□□□□ -1.33
KCNMA1-293ENST00000640969 DNAH6Q9C0G6 4158 aa6.72□□□□□ -1.33
KCNMA1-293ENST00000640969 KIAA1109Q2LD37 5005 aa6.7□□□□□ -1.34
KCNMA1-293ENST00000640969 RYR3Q15413 4870 aa6.7□□□□□ -1.34
KCNMA1-293ENST00000640969 KRTAP4-8A0A0G2JLE6 195 aa6.69□□□□□ -1.34
KCNMA1-293ENST00000640969 KRTAP4-8Q9BYQ9 185 aa6.69□□□□□ -1.34
KCNMA1-293ENST00000640969 SPRR5A0A1B0GTR4 108 aa6.66□□□□□ -1.34
KCNMA1-293ENST00000640969 LCE3DQ9BYE3 92 aa6.66□□□□□ -1.34
KCNMA1-293ENST00000640969 KMT2AQ03164 3969 aa6.64□□□□□ -1.35
KCNMA1-293ENST00000640969 KRTAP17-1Q9BYP8 105 aa6.63□□□□□ -1.35
KCNMA1-293ENST00000640969 KRTAP9-8Q9BYQ0 159 aa6.63□□□□□ -1.35
KCNMA1-293ENST00000640969 HERC1Q15751 4861 aa6.6□□□□□ -1.35
KCNMA1-293ENST00000640969 FRAS1Q86XX4 4008 aa6.55□□□□□ -1.36
KCNMA1-293ENST00000640969 LCE3EQ5T5B0 92 aa6.55□□□□□ -1.36
KCNMA1-293ENST00000640969 KRTAP9-3Q9BYQ3 159 aa6.51□□□□□ -1.37
KCNMA1-293ENST00000640969 LYSTQ99698 3801 aa6.46□□□□□ -1.38
KCNMA1-293ENST00000640969 MYCBP2O75592 4640 aa6.44□□□□□ -1.38
KCNMA1-293ENST00000640969 HSPG2P98160 4391 aa6.43□□□□□ -1.38
KCNMA1-293ENST00000640969 RYR2Q92736 4967 aa6.41□□□□□ -1.38
KCNMA1-293ENST00000640969 LCE2CQ5TA81 110 aa6.4□□□□□ -1.38
KCNMA1-293ENST00000640969 KRTAP19-3Q7Z4W3 81 aa6.38□□□□□ -1.39
KCNMA1-293ENST00000640969 KRTAP4-7Q9BYR0 210 aa6.38□□□□□ -1.39
KCNMA1-293ENST00000640969 MT1LQ93083 61 aa6.33□□□□□ -1.4
KCNMA1-293ENST00000640969 HERC2O95714 4834 aa6.31□□□□□ -1.4
KCNMA1-293ENST00000640969 PKD1P98161 4303 aa6.31□□□□□ -1.4
KCNMA1-293ENST00000640969 HECTD4Q9Y4D8 3996 aa6.3□□□□□ -1.4
KCNMA1-293ENST00000640969 BIRC6Q9NR09 4857 aa6.25□□□□□ -1.41
KCNMA1-293ENST00000640969 MT1EP04732 61 aa6.25□□□□□ -1.41
KCNMA1-293ENST00000640969 LCE2DQ5TA82 110 aaPredicted RBP6.22□□□□□ -1.41
KCNMA1-293ENST00000640969 PKHD1L1Q86WI1 4243 aa6.21□□□□□ -1.42
KCNMA1-293ENST00000640969 PCLOQ9Y6V0 5065 aa6.17□□□□□ -1.42
KCNMA1-293ENST00000640969 PRM1P04553 51 aa6.13□□□□□ -1.43
KCNMA1-293ENST00000640969 MT3P25713 68 aa6.1□□□□□ -1.43
KCNMA1-293ENST00000640969 MT1MQ8N339 61 aa6.09□□□□□ -1.44
KCNMA1-293ENST00000640969 LOC100996750A0A140TA64 210 aa6.05□□□□□ -1.44
KCNMA1-293ENST00000640969 MT4P47944 62 aa6.05□□□□□ -1.44
KCNMA1-293ENST00000640969 LRP2P98164 4655 aa6.04□□□□□ -1.44
KCNMA1-293ENST00000640969 LPAP08519 4548 aa6.01□□□□□ -1.45
KCNMA1-293ENST00000640969 HYDINQ4G0P3 5121 aa6□□□□□ -1.45
KCNMA1-293ENST00000640969 KRTAP19-2Q3LHN2 52 aa5.99□□□□□ -1.45
KCNMA1-293ENST00000640969 KRTAP4-3Q9BYR4 195 aa5.94□□□□□ -1.46
KCNMA1-293ENST00000640969 EPPK1P58107 5090 aaKnown RBP5.93□□□□□ -1.46
KCNMA1-293ENST00000640969 LCE1BQ5T7P3 118 aa5.92□□□□□ -1.46
KCNMA1-293ENST00000640969 LCE1DQ5T752 114 aa5.87□□□□□ -1.47
KCNMA1-293ENST00000640969 KRTAP19-6Q3LI70 58 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms