RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 KRTAP13-2Q52LG2 175 aa3.7□□□□□ -1.82
SCARB2-224ENST00000640880 R4GN34 69 aa3.7□□□□□ -1.82
SCARB2-224ENST00000640880 LYSTQ99698 3801 aa3.7□□□□□ -1.82
SCARB2-224ENST00000640880 RYR2Q92736 4967 aa3.69□□□□□ -1.82
SCARB2-224ENST00000640880 DNAH6Q9C0G6 4158 aa3.69□□□□□ -1.82
SCARB2-224ENST00000640880 ACYP2P14621 99 aa3.69□□□□□ -1.82
SCARB2-224ENST00000640880 LINC01554Q52M75 96 aa3.69□□□□□ -1.82
SCARB2-224ENST00000640880 Q96NJ1 140 aa3.68□□□□□ -1.82
SCARB2-224ENST00000640880 MRPL34Q9BQ48 92 aaKnown RBP3.68□□□□□ -1.82
SCARB2-224ENST00000640880 SPATA8Q6RVD6 105 aa3.67□□□□□ -1.82
SCARB2-224ENST00000640880 A0A096LNI7 61 aa3.66□□□□□ -1.82
SCARB2-224ENST00000640880 KMT2AQ03164 3969 aa3.66□□□□□ -1.82
SCARB2-224ENST00000640880 RYR3Q15413 4870 aa3.66□□□□□ -1.82
SCARB2-224ENST00000640880 A0A1B0GU33 70 aa3.65□□□□□ -1.83
SCARB2-224ENST00000640880 KRTAP13-1Q8IUC0 172 aa3.64□□□□□ -1.83
SCARB2-224ENST00000640880 DMAC1Q96GE9 116 aa3.64□□□□□ -1.83
SCARB2-224ENST00000640880 A0A1B0GU69 56 aa3.63□□□□□ -1.83
SCARB2-224ENST00000640880 KRTAP13-3Q3SY46 172 aa3.63□□□□□ -1.83
SCARB2-224ENST00000640880 RETNLBQ9BQ08 111 aa3.63□□□□□ -1.83
SCARB2-224ENST00000640880 KRTAP10-1P60331 282 aa3.62□□□□□ -1.83
SCARB2-224ENST00000640880 DNAH10Q8IVF4 4471 aa3.62□□□□□ -1.83
SCARB2-224ENST00000640880 DNAH17Q9UFH2 4485 aa3.62□□□□□ -1.83
SCARB2-224ENST00000640880 UQCR11O14957 56 aa3.61□□□□□ -1.83
SCARB2-224ENST00000640880 DNAH2Q9P225 4427 aa3.6□□□□□ -1.83
SCARB2-224ENST00000640880 MIR22HGQ0VDD5 57 aa3.6□□□□□ -1.83
SCARB2-224ENST00000640880 FRAS1Q86XX4 4008 aa3.59□□□□□ -1.83
SCARB2-224ENST00000640880 KRTAP5-1Q6L8H4 278 aa3.58□□□□□ -1.84
SCARB2-224ENST00000640880 Q6ZSA8 131 aa3.58□□□□□ -1.84
SCARB2-224ENST00000640880 FAT2Q9NYQ8 4349 aa3.57□□□□□ -1.84
SCARB2-224ENST00000640880 SMR3BP02814 79 aaPredicted RBP3.57□□□□□ -1.84
SCARB2-224ENST00000640880 SPACA4Q8TDM5 124 aa3.57□□□□□ -1.84
SCARB2-224ENST00000640880 Q5VSD8 79 aa3.56□□□□□ -1.84
SCARB2-224ENST00000640880 PKD1P98161 4303 aa3.55□□□□□ -1.84
SCARB2-224ENST00000640880 EPPK1P58107 5090 aaKnown RBP3.55□□□□□ -1.84
SCARB2-224ENST00000640880 DNAH11Q96DT5 4516 aa3.54□□□□□ -1.84
SCARB2-224ENST00000640880 CSAG1Q6PB30 78 aa3.53□□□□□ -1.84
SCARB2-224ENST00000640880 DYNC1H1Q14204 4646 aaKnown RBP3.53□□□□□ -1.84
SCARB2-224ENST00000640880 HECTD4Q9Y4D8 3996 aa3.52□□□□□ -1.85
SCARB2-224ENST00000640880 BIRC6Q9NR09 4857 aa3.52□□□□□ -1.85
SCARB2-224ENST00000640880 SSBP3-AS1Q7Z2R9 100 aa3.5□□□□□ -1.85
SCARB2-224ENST00000640880 DNAH5Q8TE73 4624 aa3.5□□□□□ -1.85
SCARB2-224ENST00000640880 PKHD1P08F94 4074 aa3.49□□□□□ -1.85
SCARB2-224ENST00000640880 SPRR5A0A1B0GTR4 108 aa3.49□□□□□ -1.85
SCARB2-224ENST00000640880 LINC00304Q8N9R0 145 aa3.49□□□□□ -1.85
SCARB2-224ENST00000640880 LRP1BQ9NZR2 4599 aa3.49□□□□□ -1.85
SCARB2-224ENST00000640880 KIAA1109Q2LD37 5005 aa3.47□□□□□ -1.85
SCARB2-224ENST00000640880 SPINK6Q6UWN8 80 aa3.47□□□□□ -1.85
SCARB2-224ENST00000640880 PSORS1C2Q9UIG4 136 aa3.47□□□□□ -1.85
SCARB2-224ENST00000640880 APOBP04114 4563 aaKnown RBP3.46□□□□□ -1.86
SCARB2-224ENST00000640880 KRTAP9-6A8MVA2 160 aa3.44□□□□□ -1.86
SCARB2-224ENST00000640880 ROMO1P60602 79 aa3.44□□□□□ -1.86
SCARB2-224ENST00000640880 DNAH8Q96JB1 4490 aa3.44□□□□□ -1.86
SCARB2-224ENST00000640880 HSPG2P98160 4391 aa3.44□□□□□ -1.86
SCARB2-224ENST00000640880 RYR1P21817 5038 aa3.44□□□□□ -1.86
SCARB2-224ENST00000640880 KRTAP4-4Q9BYR3 166 aa3.43□□□□□ -1.86
SCARB2-224ENST00000640880 KRTAP5-4Q6L8H1 288 aa3.42□□□□□ -1.86
SCARB2-224ENST00000640880 KRTAP10-4P60372 401 aaPredicted RBP3.41□□□□□ -1.86
SCARB2-224ENST00000640880 HERC2O95714 4834 aa3.4□□□□□ -1.87
SCARB2-224ENST00000640880 H0YAA0 97 aa3.39□□□□□ -1.87
SCARB2-224ENST00000640880 P0C880 135 aa3.39□□□□□ -1.87
SCARB2-224ENST00000640880 KRTAP5-9P26371 169 aa3.38□□□□□ -1.87
SCARB2-224ENST00000640880 FAT1Q14517 4588 aa3.37□□□□□ -1.87
SCARB2-224ENST00000640880 H1FX-AS1Q4G0G2 97 aa3.37□□□□□ -1.87
SCARB2-224ENST00000640880 C20orf166-AS1Q96NR2 134 aa3.36□□□□□ -1.87
SCARB2-224ENST00000640880 FLG2Q5D862 2391 aaPredicted RBP3.35□□□□□ -1.87
SCARB2-224ENST00000640880 SPINK1P00995 79 aa3.34□□□□□ -1.87
SCARB2-224ENST00000640880 VPS13BQ7Z7G8 4022 aa3.32□□□□□ -1.88
SCARB2-224ENST00000640880 RPS29P62273 56 aaKnown RBP3.31□□□□□ -1.88
SCARB2-224ENST00000640880 SRRM2Q9UQ35 2752 aaKnown RBP3.31□□□□□ -1.88
SCARB2-224ENST00000640880 ABCA13Q86UQ4 5058 aa3.3□□□□□ -1.88
SCARB2-224ENST00000640880 MT1HL1P0DM35 61 aa3.3□□□□□ -1.88
SCARB2-224ENST00000640880 KRTAP10-8P60410 259 aa3.3□□□□□ -1.88
SCARB2-224ENST00000640880 PKHD1L1Q86WI1 4243 aa3.3□□□□□ -1.88
SCARB2-224ENST00000640880 PCLOQ9Y6V0 5065 aa3.29□□□□□ -1.88
SCARB2-224ENST00000640880 LCE3DQ9BYE3 92 aa3.29□□□□□ -1.88
SCARB2-224ENST00000640880 COX6B2Q6YFQ2 88 aa3.28□□□□□ -1.88
SCARB2-224ENST00000640880 DMBT1Q9UGM3 2413 aaPredicted RBP3.27□□□□□ -1.89
SCARB2-224ENST00000640880 OBSCNQ5VST9 7968 aa3.26□□□□□ -1.89
SCARB2-224ENST00000640880 FAT3Q8TDW7 4589 aa3.25□□□□□ -1.89
SCARB2-224ENST00000640880 RPL37P61927 97 aaKnown RBP3.24□□□□□ -1.89
SCARB2-224ENST00000640880 LRP1Q07954 4544 aaKnown RBP3.23□□□□□ -1.89
SCARB2-224ENST00000640880 PRO2289Q9P1D8 64 aa3.23□□□□□ -1.89
SCARB2-224ENST00000640880 MYCBP2O75592 4640 aa3.23□□□□□ -1.89
SCARB2-224ENST00000640880 KRTAP10-10P60014 251 aa3.22□□□□□ -1.89
SCARB2-224ENST00000640880 TPRXLQ17RH7 258 aa3.2□□□□□ -1.9
SCARB2-224ENST00000640880 CRIPTQ9P021 101 aa3.19□□□□□ -1.9
SCARB2-224ENST00000640880 TNXBP22105 4242 aa3.17□□□□□ -1.9
SCARB2-224ENST00000640880 C9orf92A6NGG3 77 aa3.12□□□□□ -1.91
SCARB2-224ENST00000640880 HERC1Q15751 4861 aa3.11□□□□□ -1.91
SCARB2-224ENST00000640880 S4R3F8 94 aa3.11□□□□□ -1.91
SCARB2-224ENST00000640880 KRTAP13-4Q3LI77 160 aa3.1□□□□□ -1.91
SCARB2-224ENST00000640880 C10orf95Q9H7T3 257 aa3.08□□□□□ -1.92
SCARB2-224ENST00000640880 A0A0D9SG42 100 aa3.07□□□□□ -1.92
SCARB2-224ENST00000640880 HMCN2Q8NDA2 5059 aa3.07□□□□□ -1.92
SCARB2-224ENST00000640880 M0QZ58 72 aa3.05□□□□□ -1.92
SCARB2-224ENST00000640880 KRTAP4-3Q9BYR4 195 aa3.05□□□□□ -1.92
SCARB2-224ENST00000640880 KRTAP12-1P59990 96 aa3.04□□□□□ -1.92
SCARB2-224ENST00000640880 LPAP08519 4548 aa3.03□□□□□ -1.92
SCARB2-224ENST00000640880 PP632Q6XCG6 107 aa3.01□□□□□ -1.93
SCARB2-224ENST00000640880 LRP2P98164 4655 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms