RNA–Protein interactions for RNA: ENST00000640765.1

TRPS1-212, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 2 BASIC

Gene TRPS1, Length 9,514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-212ENST00000640765 LYSTQ99698 3801 aa3.56□□□□□ -1.84
TRPS1-212ENST00000640765 ANK3Q12955 4377 aaKnown RBP3.55□□□□□ -1.84
TRPS1-212ENST00000640765 DNAH3Q8TD57 4116 aa3.47□□□□□ -1.85
TRPS1-212ENST00000640765 KRTAP8-1Q8IUC2 63 aa3.45□□□□□ -1.86
TRPS1-212ENST00000640765 ZNF469Q96JG9 3925 aaPredicted RBP3.45□□□□□ -1.86
TRPS1-212ENST00000640765 DNAH7Q8WXX0 4024 aa3.43□□□□□ -1.86
TRPS1-212ENST00000640765 ANK2Q01484 3957 aa3.39□□□□□ -1.87
TRPS1-212ENST00000640765 KRTAP10-7P60409 375 aaPredicted RBP3.39□□□□□ -1.87
TRPS1-212ENST00000640765 FRAS1Q86XX4 4008 aa3.37□□□□□ -1.87
TRPS1-212ENST00000640765 KMT2AQ03164 3969 aa3.36□□□□□ -1.87
TRPS1-212ENST00000640765 DNAH6Q9C0G6 4158 aa3.35□□□□□ -1.87
TRPS1-212ENST00000640765 DNAH2Q9P225 4427 aa3.34□□□□□ -1.88
TRPS1-212ENST00000640765 HECTD4Q9Y4D8 3996 aa3.34□□□□□ -1.88
TRPS1-212ENST00000640765 LCE3CQ5T5A8 94 aa3.3□□□□□ -1.88
TRPS1-212ENST00000640765 MT1HL1P0DM35 61 aa3.29□□□□□ -1.88
TRPS1-212ENST00000640765 MT3P25713 68 aa3.27□□□□□ -1.89
TRPS1-212ENST00000640765 LORP23490 312 aaPredicted RBP3.27□□□□□ -1.89
TRPS1-212ENST00000640765 KRTAP10-4P60372 401 aaPredicted RBP3.27□□□□□ -1.89
TRPS1-212ENST00000640765 VPS13BQ7Z7G8 4022 aa3.24□□□□□ -1.89
TRPS1-212ENST00000640765 HUWE1Q7Z6Z7 4374 aaKnown RBP3.22□□□□□ -1.89
TRPS1-212ENST00000640765 FLGP20930 4061 aaPredicted RBP3.21□□□□□ -1.9
TRPS1-212ENST00000640765 DNAH1Q9P2D7 4330 aa3.18□□□□□ -1.9
TRPS1-212ENST00000640765 KRTAP12-4P60329 112 aa3.17□□□□□ -1.9
TRPS1-212ENST00000640765 KRTAP19-5Q3LI72 72 aa3.16□□□□□ -1.9
TRPS1-212ENST00000640765 DNAH9Q9NYC9 4486 aa3.14□□□□□ -1.91
TRPS1-212ENST00000640765 SPRR2GQ9BYE4 73 aa3.12□□□□□ -1.91
TRPS1-212ENST00000640765 LCE3BQ5TA77 95 aa3.1□□□□□ -1.91
TRPS1-212ENST00000640765 PRKDCP78527 4128 aaKnown RBP3.09□□□□□ -1.91
TRPS1-212ENST00000640765 SPRR2FQ96RM1 72 aa3.09□□□□□ -1.91
TRPS1-212ENST00000640765 PLECQ15149 4684 aaKnown RBP3.08□□□□□ -1.92
TRPS1-212ENST00000640765 STARD9Q9P2P6 4700 aa3.05□□□□□ -1.92
TRPS1-212ENST00000640765 DNAH10Q8IVF4 4471 aa3.05□□□□□ -1.92
TRPS1-212ENST00000640765 DNHD1Q96M86 4753 aa3.04□□□□□ -1.92
TRPS1-212ENST00000640765 VPS13DQ5THJ4 4388 aa3.02□□□□□ -1.93
TRPS1-212ENST00000640765 LCE3DQ9BYE3 92 aa3.01□□□□□ -1.93
TRPS1-212ENST00000640765 KRTAP4-5Q9BYR2 181 aa3□□□□□ -1.93
TRPS1-212ENST00000640765 DYNC2H1Q8NCM8 4307 aaKnown RBP3□□□□□ -1.93
TRPS1-212ENST00000640765 DNAH8Q96JB1 4490 aa2.99□□□□□ -1.93
TRPS1-212ENST00000640765 MT1HP80294 61 aa2.97□□□□□ -1.93
TRPS1-212ENST00000640765 DNAH17Q9UFH2 4485 aa2.97□□□□□ -1.93
TRPS1-212ENST00000640765 LCE3EQ5T5B0 92 aa2.95□□□□□ -1.94
TRPS1-212ENST00000640765 DNAH11Q96DT5 4516 aa2.92□□□□□ -1.94
TRPS1-212ENST00000640765 MT2AP02795 61 aa2.92□□□□□ -1.94
TRPS1-212ENST00000640765 SPRR5A0A1B0GTR4 108 aa2.9□□□□□ -1.94
TRPS1-212ENST00000640765 FAT2Q9NYQ8 4349 aa2.9□□□□□ -1.95
TRPS1-212ENST00000640765 DNAH5Q8TE73 4624 aa2.89□□□□□ -1.95
TRPS1-212ENST00000640765 HYDINQ4G0P3 5121 aa2.88□□□□□ -1.95
TRPS1-212ENST00000640765 DYNC1H1Q14204 4646 aaKnown RBP2.88□□□□□ -1.95
TRPS1-212ENST00000640765 SPRR2EP22531 72 aa2.87□□□□□ -1.95
TRPS1-212ENST00000640765 SPRR2BP35325 72 aa2.87□□□□□ -1.95
TRPS1-212ENST00000640765 SPRR2AP35326 72 aa2.87□□□□□ -1.95
TRPS1-212ENST00000640765 KRTAP4-1Q9BYQ7 146 aa2.87□□□□□ -1.95
TRPS1-212ENST00000640765 LRP1BQ9NZR2 4599 aa2.87□□□□□ -1.95
TRPS1-212ENST00000640765 MT1GP13640 62 aa2.86□□□□□ -1.95
TRPS1-212ENST00000640765 KRTAP19-8Q3LI54 63 aa2.85□□□□□ -1.95
TRPS1-212ENST00000640765 MT1FP04733 61 aa2.85□□□□□ -1.95
TRPS1-212ENST00000640765 RYR2Q92736 4967 aa2.85□□□□□ -1.95
TRPS1-212ENST00000640765 LCE2BO14633 110 aa2.84□□□□□ -1.95
TRPS1-212ENST00000640765 KRTAP17-1Q9BYP8 105 aa2.82□□□□□ -1.96
TRPS1-212ENST00000640765 PKHD1L1Q86WI1 4243 aa2.81□□□□□ -1.96
TRPS1-212ENST00000640765 PRM1P04553 51 aa2.81□□□□□ -1.96
TRPS1-212ENST00000640765 SPRR2DP22532 72 aa2.79□□□□□ -1.96
TRPS1-212ENST00000640765 PKHD1P08F94 4074 aa2.79□□□□□ -1.96
TRPS1-212ENST00000640765 FAT1Q14517 4588 aa2.78□□□□□ -1.96
TRPS1-212ENST00000640765 SACSQ9NZJ4 4579 aa2.78□□□□□ -1.96
TRPS1-212ENST00000640765 PKD1P98161 4303 aa2.77□□□□□ -1.97
TRPS1-212ENST00000640765 MYCBP2O75592 4640 aa2.77□□□□□ -1.97
TRPS1-212ENST00000640765 KIAA1109Q2LD37 5005 aa2.74□□□□□ -1.97
TRPS1-212ENST00000640765 RYR1P21817 5038 aa2.74□□□□□ -1.97
TRPS1-212ENST00000640765 APOBP04114 4563 aaKnown RBP2.74□□□□□ -1.97
TRPS1-212ENST00000640765 MT1XP80297 61 aa2.73□□□□□ -1.97
TRPS1-212ENST00000640765 LRP1Q07954 4544 aaKnown RBP2.71□□□□□ -1.98
TRPS1-212ENST00000640765 KMT2CQ8NEZ4 4911 aaKnown RBP2.7□□□□□ -1.98
TRPS1-212ENST00000640765 RYR3Q15413 4870 aa2.68□□□□□ -1.98
TRPS1-212ENST00000640765 MT1LQ93083 61 aa2.68□□□□□ -1.98
TRPS1-212ENST00000640765 LCE2CQ5TA81 110 aa2.66□□□□□ -1.98
TRPS1-212ENST00000640765 KRTAP19-1Q8IUB9 90 aa2.66□□□□□ -1.98
TRPS1-212ENST00000640765 EPPK1P58107 5090 aaKnown RBP2.63□□□□□ -1.99
TRPS1-212ENST00000640765 HSPG2P98160 4391 aa2.62□□□□□ -1.99
TRPS1-212ENST00000640765 FAT3Q8TDW7 4589 aa2.62□□□□□ -1.99
TRPS1-212ENST00000640765 KRTAP19-3Q7Z4W3 81 aa2.58□□□□□ -2
TRPS1-212ENST00000640765 TNXBP22105 4242 aa2.57□□□□□ -2
TRPS1-212ENST00000640765 LCE2DQ5TA82 110 aaPredicted RBP2.57□□□□□ -2
TRPS1-212ENST00000640765 ABCA13Q86UQ4 5058 aa2.57□□□□□ -2
TRPS1-212ENST00000640765 BIRC6Q9NR09 4857 aa2.57□□□□□ -2
TRPS1-212ENST00000640765 KRTAP4-8A0A0G2JLE6 195 aa2.56□□□□□ -2
TRPS1-212ENST00000640765 KRTAP4-8Q9BYQ9 185 aa2.56□□□□□ -2
TRPS1-212ENST00000640765 LCE1BQ5T7P3 118 aa2.54□□□□□ -2
TRPS1-212ENST00000640765 LCE1DQ5T752 114 aa2.54□□□□□ -2
TRPS1-212ENST00000640765 MT1BP07438 61 aa2.53□□□□□ -2
TRPS1-212ENST00000640765 MT1EP04732 61 aa2.52□□□□□ -2.01
TRPS1-212ENST00000640765 HERC2O95714 4834 aa2.52□□□□□ -2.01
TRPS1-212ENST00000640765 LRP2P98164 4655 aa2.47□□□□□ -2.01
TRPS1-212ENST00000640765 KRTAP9-8Q9BYQ0 159 aa2.47□□□□□ -2.01
TRPS1-212ENST00000640765 LPAP08519 4548 aa2.47□□□□□ -2.01
TRPS1-212ENST00000640765 KRTAP4-7Q9BYR0 210 aa2.46□□□□□ -2.02
TRPS1-212ENST00000640765 MT4P47944 62 aa2.46□□□□□ -2.02
TRPS1-212ENST00000640765 MT1MQ8N339 61 aa2.42□□□□□ -2.02
TRPS1-212ENST00000640765 PCLOQ9Y6V0 5065 aa2.41□□□□□ -2.02
TRPS1-212ENST00000640765 KRTAP9-3Q9BYQ3 159 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms