RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 SMIM2Q9BVW6 85 aa3.58□□□□□ -1.84
NECAP1-220ENST00000639841 K7EMI3 77 aa3.57□□□□□ -1.84
NECAP1-220ENST00000639841 LINC01549A6NIU2 74 aa3.56□□□□□ -1.84
NECAP1-220ENST00000639841 F8WEM9 126 aa3.56□□□□□ -1.84
NECAP1-220ENST00000639841 LINC00643Q86TS7 51 aa3.56□□□□□ -1.84
NECAP1-220ENST00000639841 KRTAP4-4Q9BYR3 166 aa3.56□□□□□ -1.84
NECAP1-220ENST00000639841 F8VRH5 84 aa3.56□□□□□ -1.84
NECAP1-220ENST00000639841 CRCT1Q9UGL9 99 aa3.56□□□□□ -1.84
NECAP1-220ENST00000639841 LPAP08519 4548 aa3.55□□□□□ -1.84
NECAP1-220ENST00000639841 LOC110117498A0A087WWA1 95 aa3.54□□□□□ -1.84
NECAP1-220ENST00000639841 MUC17Q685J3 4493 aa3.53□□□□□ -1.84
NECAP1-220ENST00000639841 ACYP1P07311 99 aa3.53□□□□□ -1.84
NECAP1-220ENST00000639841 RPS29P62273 56 aaKnown RBP3.53□□□□□ -1.84
NECAP1-220ENST00000639841 KRTAP13-1Q8IUC0 172 aa3.53□□□□□ -1.84
NECAP1-220ENST00000639841 RPL39P62891 51 aaKnown RBP3.52□□□□□ -1.85
NECAP1-220ENST00000639841 LINC00208Q96KT6 92 aa3.52□□□□□ -1.85
NECAP1-220ENST00000639841 ZNF815PA8K554 130 aa3.52□□□□□ -1.85
NECAP1-220ENST00000639841 TMEM170BQ5T4T1 132 aa3.52□□□□□ -1.85
NECAP1-220ENST00000639841 SMIM27A0A1W2PRY6 76 aa3.51□□□□□ -1.85
NECAP1-220ENST00000639841 SPINK1P00995 79 aa3.51□□□□□ -1.85
NECAP1-220ENST00000639841 AMELXQ99217 191 aa3.51□□□□□ -1.85
NECAP1-220ENST00000639841 TOMM7Q9P0U1 55 aa3.51□□□□□ -1.85
NECAP1-220ENST00000639841 V9GYV3 84 aa3.51□□□□□ -1.85
NECAP1-220ENST00000639841 D6R8Y8 96 aa3.5□□□□□ -1.85
NECAP1-220ENST00000639841 COX17Q14061 63 aa3.49□□□□□ -1.85
NECAP1-220ENST00000639841 KRTAP13-3Q3SY46 172 aa3.49□□□□□ -1.85
NECAP1-220ENST00000639841 MUC2Q02817 5179 aa3.48□□□□□ -1.85
NECAP1-220ENST00000639841 SPRR5A0A1B0GTR4 108 aa3.48□□□□□ -1.85
NECAP1-220ENST00000639841 LINC01558Q9Y6Z2 57 aa3.47□□□□□ -1.85
NECAP1-220ENST00000639841 IGIPA6NJ69 53 aa3.46□□□□□ -1.86
NECAP1-220ENST00000639841 SSBP3-AS1Q7Z2R9 100 aa3.46□□□□□ -1.86
NECAP1-220ENST00000639841 SPRR4Q96PI1 79 aa3.46□□□□□ -1.86
NECAP1-220ENST00000639841 CDKN2A-AS1Q9UH64 79 aa3.46□□□□□ -1.86
NECAP1-220ENST00000639841 Q96NJ1 140 aa3.45□□□□□ -1.86
NECAP1-220ENST00000639841 PRR15LQ9BU68 103 aa3.45□□□□□ -1.86
NECAP1-220ENST00000639841 SMIM13P0DJ93 91 aa3.44□□□□□ -1.86
NECAP1-220ENST00000639841 MYMXA0A1B0GTQ4 84 aa3.43□□□□□ -1.86
NECAP1-220ENST00000639841 PRLHP81277 87 aa3.43□□□□□ -1.86
NECAP1-220ENST00000639841 ETDCA0A1B0GVM5 59 aa3.41□□□□□ -1.86
NECAP1-220ENST00000639841 OBSCN-AS1Q96MR7 158 aa3.41□□□□□ -1.86
NECAP1-220ENST00000639841 KRTAP13-4Q3LI77 160 aa3.4□□□□□ -1.86
NECAP1-220ENST00000639841 LINC01546A6NGU7 62 aa3.4□□□□□ -1.87
NECAP1-220ENST00000639841 SPRR1AP35321 89 aa3.4□□□□□ -1.87
NECAP1-220ENST00000639841 SNURFQ9Y675 71 aa3.4□□□□□ -1.87
NECAP1-220ENST00000639841 LEPROTL1O95214 131 aa3.39□□□□□ -1.87
NECAP1-220ENST00000639841 IGKV4-1P06312 121 aa3.39□□□□□ -1.87
NECAP1-220ENST00000639841 LCE3EQ5T5B0 92 aa3.39□□□□□ -1.87
NECAP1-220ENST00000639841 LCE1EQ5T753 118 aa3.39□□□□□ -1.87
NECAP1-220ENST00000639841 KCNQ1DNQ9H478 68 aa3.39□□□□□ -1.87
NECAP1-220ENST00000639841 A0A087WVE0 104 aa3.38□□□□□ -1.87
NECAP1-220ENST00000639841 MT1HP80294 61 aa3.38□□□□□ -1.87
NECAP1-220ENST00000639841 UQCR11O14957 56 aa3.37□□□□□ -1.87
NECAP1-220ENST00000639841 KRTAP4-1Q9BYQ7 146 aa3.36□□□□□ -1.87
NECAP1-220ENST00000639841 M0R2T5 61 aa3.36□□□□□ -1.87
NECAP1-220ENST00000639841 LINC00158P58513 81 aa3.36□□□□□ -1.87
NECAP1-220ENST00000639841 BAGE3Q86Y29 109 aa3.36□□□□□ -1.87
NECAP1-220ENST00000639841 COX6B2Q6YFQ2 88 aa3.35□□□□□ -1.87
NECAP1-220ENST00000639841 MUSTN1Q8IVN3 82 aa3.35□□□□□ -1.87
NECAP1-220ENST00000639841 Q6ZQY7 126 aa3.34□□□□□ -1.88
NECAP1-220ENST00000639841 Q6ZRX8 168 aa3.34□□□□□ -1.88
NECAP1-220ENST00000639841 KRTAP19-2Q3LHN2 52 aa3.33□□□□□ -1.88
NECAP1-220ENST00000639841 PCOTHQ58A44 107 aa3.33□□□□□ -1.88
NECAP1-220ENST00000639841 LINC00472Q9H8W2 130 aa3.32□□□□□ -1.88
NECAP1-220ENST00000639841 LINC00846Q9NV44 126 aa3.32□□□□□ -1.88
NECAP1-220ENST00000639841 SPRR1BP22528 89 aa3.31□□□□□ -1.88
NECAP1-220ENST00000639841 Q6JHZ5 121 aa3.31□□□□□ -1.88
NECAP1-220ENST00000639841 ZCCHC13Q8WW36 166 aaKnown RBP3.31□□□□□ -1.88
NECAP1-220ENST00000639841 NCR3O14931 201 aa3.3□□□□□ -1.88
NECAP1-220ENST00000639841 RPL37P61927 97 aaKnown RBP3.3□□□□□ -1.88
NECAP1-220ENST00000639841 PP632Q6XCG6 107 aa3.3□□□□□ -1.88
NECAP1-220ENST00000639841 ACYP2P14621 99 aa3.27□□□□□ -1.89
NECAP1-220ENST00000639841 FSIP2Q5CZC0 6907 aa3.27□□□□□ -1.89
NECAP1-220ENST00000639841 C9orf92A6NGG3 77 aa3.25□□□□□ -1.89
NECAP1-220ENST00000639841 SPINK7P58062 85 aa3.25□□□□□ -1.89
NECAP1-220ENST00000639841 COX8AP10176 69 aa3.24□□□□□ -1.89
NECAP1-220ENST00000639841 PLNP26678 52 aa3.24□□□□□ -1.89
NECAP1-220ENST00000639841 TRBV7-4A0A0J9YYF1 115 aa3.23□□□□□ -1.89
NECAP1-220ENST00000639841 KRTAP12-2P59991 146 aa3.21□□□□□ -1.89
NECAP1-220ENST00000639841 COX7BP24311 80 aa3.21□□□□□ -1.9
NECAP1-220ENST00000639841 SPATA8Q6RVD6 105 aa3.21□□□□□ -1.9
NECAP1-220ENST00000639841 GPR98Q8WXG9 6306 aa3.19□□□□□ -1.9
NECAP1-220ENST00000639841 FLGP20930 4061 aaPredicted RBP3.19□□□□□ -1.9
NECAP1-220ENST00000639841 IGLV5-48A0A075B6I7 105 aa3.19□□□□□ -1.9
NECAP1-220ENST00000639841 H0Y9P7 68 aa3.18□□□□□ -1.9
NECAP1-220ENST00000639841 ATP5EP2Q5VTU8 51 aa3.18□□□□□ -1.9
NECAP1-220ENST00000639841 KRTAP12-1P59990 96 aa3.17□□□□□ -1.9
NECAP1-220ENST00000639841 C3orf79P0CE67 100 aa3.16□□□□□ -1.9
NECAP1-220ENST00000639841 KRTAP10-10P60014 251 aa3.15□□□□□ -1.91
NECAP1-220ENST00000639841 KRTAP5-2Q701N4 177 aa3.15□□□□□ -1.91
NECAP1-220ENST00000639841 LINC00308Q8TCZ7 52 aa3.15□□□□□ -1.91
NECAP1-220ENST00000639841 DEFB105AQ8NG35 78 aa3.14□□□□□ -1.91
NECAP1-220ENST00000639841 PLAC4Q8WY50 150 aa3.14□□□□□ -1.91
NECAP1-220ENST00000639841 KRTAP6-3Q3LI67 103 aa3.13□□□□□ -1.91
NECAP1-220ENST00000639841 SMIM11BQ8TCY0 68 aa3.11□□□□□ -1.91
NECAP1-220ENST00000639841 MT2AP02795 61 aa3.1□□□□□ -1.91
NECAP1-220ENST00000639841 KRTAP10-5P60370 271 aa3.1□□□□□ -1.91
NECAP1-220ENST00000639841 LINC00575Q6W349 94 aa3.09□□□□□ -1.91
NECAP1-220ENST00000639841 KRTAP19-6Q3LI70 58 aa3.09□□□□□ -1.92
NECAP1-220ENST00000639841 SSPOA2VEC9 5147 aa3.09□□□□□ -1.92
NECAP1-220ENST00000639841 USH2AO75445 5202 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms