RNA–Protein interactions for RNA: ENST00000639702.1

RBM39-245, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 5,914 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-245ENST00000639702 SPRR2GQ9BYE4 73 aa4.88□□□□□ -1.63
RBM39-245ENST00000639702 SMG1Q96Q15 3661 aaKnown RBP4.87□□□□□ -1.63
RBM39-245ENST00000639702 MT2AP02795 61 aa4.86□□□□□ -1.63
RBM39-245ENST00000639702 DNAH10Q8IVF4 4471 aa4.85□□□□□ -1.63
RBM39-245ENST00000639702 COL7A1Q02388 2944 aa4.83□□□□□ -1.64
RBM39-245ENST00000639702 SPENQ96T58 3664 aaKnown RBP4.82□□□□□ -1.64
RBM39-245ENST00000639702 DNAH5Q8TE73 4624 aa4.79□□□□□ -1.64
RBM39-245ENST00000639702 CUBNO60494 3623 aa4.79□□□□□ -1.64
RBM39-245ENST00000639702 BSNQ9UPA5 3926 aa4.79□□□□□ -1.64
RBM39-245ENST00000639702 DNAH11Q96DT5 4516 aa4.78□□□□□ -1.64
RBM39-245ENST00000639702 KRTAP19-4Q3LI73 84 aa4.76□□□□□ -1.65
RBM39-245ENST00000639702 SRRM2Q9UQ35 2752 aaKnown RBP4.75□□□□□ -1.65
RBM39-245ENST00000639702 KRTAP10-7P60409 375 aaPredicted RBP4.74□□□□□ -1.65
RBM39-245ENST00000639702 MT1FP04733 61 aa4.72□□□□□ -1.65
RBM39-245ENST00000639702 DNAH17Q9UFH2 4485 aa4.7□□□□□ -1.66
RBM39-245ENST00000639702 SPRR2FQ96RM1 72 aa4.7□□□□□ -1.66
RBM39-245ENST00000639702 CSMD2Q7Z408 3487 aa4.69□□□□□ -1.66
RBM39-245ENST00000639702 SVEP1Q4LDE5 3571 aa4.69□□□□□ -1.66
RBM39-245ENST00000639702 KRTAP19-5Q3LI72 72 aa4.68□□□□□ -1.66
RBM39-245ENST00000639702 VPS13DQ5THJ4 4388 aa4.67□□□□□ -1.66
RBM39-245ENST00000639702 AKAP9Q99996 3911 aa4.66□□□□□ -1.66
RBM39-245ENST00000639702 PLECQ15149 4684 aaKnown RBP4.65□□□□□ -1.67
RBM39-245ENST00000639702 LCE3CQ5T5A8 94 aa4.65□□□□□ -1.67
RBM39-245ENST00000639702 DNAH3Q8TD57 4116 aa4.62□□□□□ -1.67
RBM39-245ENST00000639702 FAT2Q9NYQ8 4349 aa4.59□□□□□ -1.67
RBM39-245ENST00000639702 DYNC1H1Q14204 4646 aaKnown RBP4.59□□□□□ -1.67
RBM39-245ENST00000639702 DYNC2H1Q8NCM8 4307 aaKnown RBP4.58□□□□□ -1.68
RBM39-245ENST00000639702 SACSQ9NZJ4 4579 aa4.56□□□□□ -1.68
RBM39-245ENST00000639702 VPS13CQ709C8 3753 aa4.54□□□□□ -1.68
RBM39-245ENST00000639702 KRTAP19-8Q3LI54 63 aa4.52□□□□□ -1.69
RBM39-245ENST00000639702 LRP1BQ9NZR2 4599 aa4.51□□□□□ -1.69
RBM39-245ENST00000639702 DNAH6Q9C0G6 4158 aa4.48□□□□□ -1.69
RBM39-245ENST00000639702 SPRR2EP22531 72 aa4.47□□□□□ -1.69
RBM39-245ENST00000639702 SPRR2BP35325 72 aa4.47□□□□□ -1.69
RBM39-245ENST00000639702 SPRR2AP35326 72 aa4.47□□□□□ -1.69
RBM39-245ENST00000639702 DNAH8Q96JB1 4490 aa4.45□□□□□ -1.7
RBM39-245ENST00000639702 ZNF469Q96JG9 3925 aaPredicted RBP4.41□□□□□ -1.7
RBM39-245ENST00000639702 FAT1Q14517 4588 aa4.4□□□□□ -1.7
RBM39-245ENST00000639702 KRTAP19-1Q8IUB9 90 aa4.39□□□□□ -1.71
RBM39-245ENST00000639702 CMYA5Q8N3K9 4069 aa4.38□□□□□ -1.71
RBM39-245ENST00000639702 DNAH7Q8WXX0 4024 aa4.36□□□□□ -1.71
RBM39-245ENST00000639702 HERC1Q15751 4861 aa4.36□□□□□ -1.71
RBM39-245ENST00000639702 STARD9Q9P2P6 4700 aa4.36□□□□□ -1.71
RBM39-245ENST00000639702 SPRR2DP22532 72 aa4.34□□□□□ -1.71
RBM39-245ENST00000639702 MT1XP80297 61 aa4.34□□□□□ -1.71
RBM39-245ENST00000639702 PRKDCP78527 4128 aaKnown RBP4.34□□□□□ -1.71
RBM39-245ENST00000639702 CSMD3Q7Z407 3707 aa4.34□□□□□ -1.72
RBM39-245ENST00000639702 LCE2BO14633 110 aa4.31□□□□□ -1.72
RBM39-245ENST00000639702 HSPG2P98160 4391 aa4.3□□□□□ -1.72
RBM39-245ENST00000639702 LRP1Q07954 4544 aaKnown RBP4.3□□□□□ -1.72
RBM39-245ENST00000639702 APOBP04114 4563 aaKnown RBP4.3□□□□□ -1.72
RBM39-245ENST00000639702 FAT3Q8TDW7 4589 aa4.3□□□□□ -1.72
RBM39-245ENST00000639702 MT1BP07438 61 aa4.29□□□□□ -1.72
RBM39-245ENST00000639702 RYR1P21817 5038 aa4.28□□□□□ -1.72
RBM39-245ENST00000639702 KRTAP12-4P60329 112 aa4.27□□□□□ -1.73
RBM39-245ENST00000639702 ANK2Q01484 3957 aa4.27□□□□□ -1.73
RBM39-245ENST00000639702 LCE3BQ5TA77 95 aa4.26□□□□□ -1.73
RBM39-245ENST00000639702 KRTAP9-8Q9BYQ0 159 aa4.26□□□□□ -1.73
RBM39-245ENST00000639702 DNHD1Q96M86 4753 aa4.26□□□□□ -1.73
RBM39-245ENST00000639702 MT1GP13640 62 aa4.25□□□□□ -1.73
RBM39-245ENST00000639702 KRTAP17-1Q9BYP8 105 aa4.22□□□□□ -1.73
RBM39-245ENST00000639702 VPS13BQ7Z7G8 4022 aa4.21□□□□□ -1.73
RBM39-245ENST00000639702 RYR3Q15413 4870 aa4.2□□□□□ -1.74
RBM39-245ENST00000639702 KRTAP9-3Q9BYQ3 159 aa4.2□□□□□ -1.74
RBM39-245ENST00000639702 LCE2CQ5TA81 110 aa4.14□□□□□ -1.75
RBM39-245ENST00000639702 KMT2AQ03164 3969 aa4.13□□□□□ -1.75
RBM39-245ENST00000639702 RYR2Q92736 4967 aa4.12□□□□□ -1.75
RBM39-245ENST00000639702 SPRR5A0A1B0GTR4 108 aa4.1□□□□□ -1.75
RBM39-245ENST00000639702 KRTAP4-8A0A0G2JLE6 195 aa4.1□□□□□ -1.75
RBM39-245ENST00000639702 KRTAP4-8Q9BYQ9 185 aa4.1□□□□□ -1.75
RBM39-245ENST00000639702 FRAS1Q86XX4 4008 aa4.09□□□□□ -1.75
RBM39-245ENST00000639702 MYCBP2O75592 4640 aa4.09□□□□□ -1.75
RBM39-245ENST00000639702 PKHD1L1Q86WI1 4243 aa4.09□□□□□ -1.75
RBM39-245ENST00000639702 LCE3DQ9BYE3 92 aa4.08□□□□□ -1.76
RBM39-245ENST00000639702 KRTAP19-3Q7Z4W3 81 aa4.06□□□□□ -1.76
RBM39-245ENST00000639702 LCE3EQ5T5B0 92 aa4.02□□□□□ -1.77
RBM39-245ENST00000639702 PKD1P98161 4303 aa4.01□□□□□ -1.77
RBM39-245ENST00000639702 MT1LQ93083 61 aa4□□□□□ -1.77
RBM39-245ENST00000639702 HECTD4Q9Y4D8 3996 aa3.96□□□□□ -1.77
RBM39-245ENST00000639702 MT1EP04732 61 aa3.95□□□□□ -1.78
RBM39-245ENST00000639702 LCE2DQ5TA82 110 aaPredicted RBP3.95□□□□□ -1.78
RBM39-245ENST00000639702 LYSTQ99698 3801 aa3.89□□□□□ -1.79
RBM39-245ENST00000639702 BIRC6Q9NR09 4857 aa3.89□□□□□ -1.79
RBM39-245ENST00000639702 KRTAP19-2Q3LHN2 52 aa3.88□□□□□ -1.79
RBM39-245ENST00000639702 KRTAP19-6Q3LI70 58 aa3.88□□□□□ -1.79
RBM39-245ENST00000639702 MT3P25713 68 aa3.86□□□□□ -1.79
RBM39-245ENST00000639702 MUC17Q685J3 4493 aa3.86□□□□□ -1.79
RBM39-245ENST00000639702 MT1MQ8N339 61 aa3.84□□□□□ -1.79
RBM39-245ENST00000639702 KRTAP4-7Q9BYR0 210 aa3.82□□□□□ -1.8
RBM39-245ENST00000639702 KIAA1109Q2LD37 5005 aa3.81□□□□□ -1.8
RBM39-245ENST00000639702 HERC2O95714 4834 aa3.78□□□□□ -1.8
RBM39-245ENST00000639702 KRTAP9-2Q9BYQ4 174 aa3.77□□□□□ -1.81
RBM39-245ENST00000639702 MT4P47944 62 aa3.76□□□□□ -1.81
RBM39-245ENST00000639702 TNXBP22105 4242 aa3.73□□□□□ -1.81
RBM39-245ENST00000639702 PKHD1P08F94 4074 aa3.69□□□□□ -1.82
RBM39-245ENST00000639702 FLGP20930 4061 aaPredicted RBP3.69□□□□□ -1.82
RBM39-245ENST00000639702 PCLOQ9Y6V0 5065 aa3.67□□□□□ -1.82
RBM39-245ENST00000639702 LPAP08519 4548 aa3.66□□□□□ -1.82
RBM39-245ENST00000639702 LRP2P98164 4655 aa3.64□□□□□ -1.83
RBM39-245ENST00000639702 PRM1P04553 51 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms