RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 DNAL4O96015 105 aa1.39□□□□□ -2.19
CCDC7-213ENST00000639290 ELOF1P60002 83 aaKnown RBP1.39□□□□□ -2.19
CCDC7-213ENST00000639290 NXT2Q9NPJ8 142 aaKnown RBP1.39□□□□□ -2.19
CCDC7-213ENST00000639290 COX6CP09669 75 aa1.38□□□□□ -2.19
CCDC7-213ENST00000639290 SSBP1Q04837 148 aaKnown RBP1.38□□□□□ -2.19
CCDC7-213ENST00000639290 ADIRFQ15847 76 aa1.38□□□□□ -2.19
CCDC7-213ENST00000639290 LCE3CQ5T5A8 94 aa1.38□□□□□ -2.19
CCDC7-213ENST00000639290 C20orf197Q8N268 126 aa1.38□□□□□ -2.19
CCDC7-213ENST00000639290 TRAV22A0A0B4J277 110 aa1.38□□□□□ -2.19
CCDC7-213ENST00000639290 SPATA45Q537H7 98 aa1.38□□□□□ -2.19
CCDC7-213ENST00000639290 UNQ6190/PRO20217Q6UXQ8 127 aa1.38□□□□□ -2.19
CCDC7-213ENST00000639290 ST20Q9HBF5 79 aa1.38□□□□□ -2.19
CCDC7-213ENST00000639290 SPCS1Q9Y6A9 102 aa1.38□□□□□ -2.19
CCDC7-213ENST00000639290 CHKB-CPT1BH3BT56 60 aa1.37□□□□□ -2.19
CCDC7-213ENST00000639290 H7BZZ5 65 aa1.37□□□□□ -2.19
CCDC7-213ENST00000639290 ARMS2P0C7Q2 107 aa1.37□□□□□ -2.19
CCDC7-213ENST00000639290 KRTAP12-4P60329 112 aa1.37□□□□□ -2.19
CCDC7-213ENST00000639290 PPP1R1CQ8WVI7 109 aa1.37□□□□□ -2.19
CCDC7-213ENST00000639290 LOC110117498A0A087WWA1 95 aa1.36□□□□□ -2.19
CCDC7-213ENST00000639290 LOC101927531A0A1B0GV80 90 aa1.36□□□□□ -2.19
CCDC7-213ENST00000639290 H3BVH4 76 aa1.36□□□□□ -2.19
CCDC7-213ENST00000639290 M0QY20 66 aa1.36□□□□□ -2.19
CCDC7-213ENST00000639290 COX7B2Q8TF08 81 aa1.36□□□□□ -2.19
CCDC7-213ENST00000639290 CDC42SE2Q9NRR3 84 aa1.36□□□□□ -2.19
CCDC7-213ENST00000639290 SNURFQ9Y675 71 aa1.36□□□□□ -2.19
CCDC7-213ENST00000639290 ZNF625Q96I27 306 aaPredicted RBP1.36□□□□□ -2.19
CCDC7-213ENST00000639290 IGKV3D-7A0A0C4DH55 119 aa1.35□□□□□ -2.19
CCDC7-213ENST00000639290 A0A1W2PPM0 123 aa1.35□□□□□ -2.19
CCDC7-213ENST00000639290 KLKP1Q107X0 134 aa1.35□□□□□ -2.19
CCDC7-213ENST00000639290 ETDBQ3ZM63 59 aa1.35□□□□□ -2.19
CCDC7-213ENST00000639290 Q86TA4 180 aa1.35□□□□□ -2.19
CCDC7-213ENST00000639290 SMCO4Q9NRQ5 59 aa1.35□□□□□ -2.19
CCDC7-213ENST00000639290 PPP1R17O96001 155 aa1.35□□□□□ -2.19
CCDC7-213ENST00000639290 MT1XP80297 61 aa1.35□□□□□ -2.19
CCDC7-213ENST00000639290 PP632Q6XCG6 107 aa1.35□□□□□ -2.19
CCDC7-213ENST00000639290 CRIPTQ9P021 101 aa1.35□□□□□ -2.19
CCDC7-213ENST00000639290 HIGD1BQ9P298 99 aa1.35□□□□□ -2.19
CCDC7-213ENST00000639290 KANTRA0A1W2PQU2 76 aa1.34□□□□□ -2.19
CCDC7-213ENST00000639290 PMCHL1Q16048 86 aa1.34□□□□□ -2.19
CCDC7-213ENST00000639290 NMES1Q9C002 83 aa1.34□□□□□ -2.19
CCDC7-213ENST00000639290 V9GYH0 126 aa1.34□□□□□ -2.19
CCDC7-213ENST00000639290 IGKV2-29A2NJV5 120 aaPredicted RBP1.34□□□□□ -2.2
CCDC7-213ENST00000639290 TMEM170BQ5T4T1 132 aa1.33□□□□□ -2.2
CCDC7-213ENST00000639290 AMELXQ99217 191 aa1.33□□□□□ -2.2
CCDC7-213ENST00000639290 F2Z2F3 143 aa1.33□□□□□ -2.2
CCDC7-213ENST00000639290 IGLC3P0DOY3 106 aa1.33□□□□□ -2.2
CCDC7-213ENST00000639290 MT1GP13640 62 aa1.33□□□□□ -2.2
CCDC7-213ENST00000639290 BVES-AS1Q5T3Y7 98 aa1.33□□□□□ -2.2
CCDC7-213ENST00000639290 SFTA2Q6UW10 78 aa1.33□□□□□ -2.2
CCDC7-213ENST00000639290 V9GYV3 84 aa1.33□□□□□ -2.2
CCDC7-213ENST00000639290 ACYP1P07311 99 aa1.32□□□□□ -2.2
CCDC7-213ENST00000639290 DEFB107AQ8IZN7 70 aa1.32□□□□□ -2.2
CCDC7-213ENST00000639290 IAPPP10997 89 aa1.32□□□□□ -2.2
CCDC7-213ENST00000639290 PRO0461Q9UI25 63 aa1.32□□□□□ -2.2
CCDC7-213ENST00000639290 IGKV4-1P06312 121 aa1.31□□□□□ -2.2
CCDC7-213ENST00000639290 ZNF815PA8K554 130 aa1.31□□□□□ -2.2
CCDC7-213ENST00000639290 LINC00643Q86TS7 51 aa1.31□□□□□ -2.2
CCDC7-213ENST00000639290 LINC00208Q96KT6 92 aa1.31□□□□□ -2.2
CCDC7-213ENST00000639290 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.3□□□□□ -2.2
CCDC7-213ENST00000639290 F8VRH5 84 aa1.3□□□□□ -2.2
CCDC7-213ENST00000639290 H3BUT2 72 aa1.3□□□□□ -2.2
CCDC7-213ENST00000639290 SPRR1AP35321 89 aa1.3□□□□□ -2.2
CCDC7-213ENST00000639290 KRTAP13-4Q3LI77 160 aa1.3□□□□□ -2.2
CCDC7-213ENST00000639290 Q5BKY6 102 aa1.3□□□□□ -2.2
CCDC7-213ENST00000639290 Q6ZQY7 126 aa1.29□□□□□ -2.2
CCDC7-213ENST00000639290 F8WEM9 126 aa1.29□□□□□ -2.2
CCDC7-213ENST00000639290 LCE3AQ5TA76 89 aa1.29□□□□□ -2.2
CCDC7-213ENST00000639290 BAGE3Q86Y29 109 aa1.29□□□□□ -2.2
CCDC7-213ENST00000639290 Q8IZM0 81 aa1.29□□□□□ -2.2
CCDC7-213ENST00000639290 C18orf32Q8TCD1 76 aa1.29□□□□□ -2.2
CCDC7-213ENST00000639290 OBSCN-AS1Q96MR7 158 aa1.29□□□□□ -2.2
CCDC7-213ENST00000639290 PSENENQ9NZ42 101 aa1.29□□□□□ -2.2
CCDC7-213ENST00000639290 LINC01558Q9Y6Z2 57 aa1.29□□□□□ -2.2
CCDC7-213ENST00000639290 UQCR11O14957 56 aa1.28□□□□□ -2.2
CCDC7-213ENST00000639290 SPRR1BP22528 89 aa1.28□□□□□ -2.2
CCDC7-213ENST00000639290 BAGE2Q86Y30 109 aa1.28□□□□□ -2.2
CCDC7-213ENST00000639290 CTXND1A0A1B0GTU2 59 aa1.27□□□□□ -2.21
CCDC7-213ENST00000639290 I3L3M4 83 aa1.27□□□□□ -2.21
CCDC7-213ENST00000639290 CRIP1P50238 77 aa1.27□□□□□ -2.21
CCDC7-213ENST00000639290 Q96NJ1 140 aa1.27□□□□□ -2.21
CCDC7-213ENST00000639290 C7orf77A4D0Y5 90 aa1.26□□□□□ -2.21
CCDC7-213ENST00000639290 MT1EP04732 61 aa1.26□□□□□ -2.21
CCDC7-213ENST00000639290 ARL14EPLP0DKL9 152 aa1.26□□□□□ -2.21
CCDC7-213ENST00000639290 LCE3EQ5T5B0 92 aa1.26□□□□□ -2.21
CCDC7-213ENST00000639290 MGPP08493 103 aa1.26□□□□□ -2.21
CCDC7-213ENST00000639290 H1FX-AS1Q4G0G2 97 aa1.26□□□□□ -2.21
CCDC7-213ENST00000639290 PRR15LQ9BU68 103 aa1.26□□□□□ -2.21
CCDC7-213ENST00000639290 MYMXA0A1B0GTQ4 84 aa1.25□□□□□ -2.21
CCDC7-213ENST00000639290 COX17Q14061 63 aa1.25□□□□□ -2.21
CCDC7-213ENST00000639290 SMIM4Q8WVI0 70 aa1.25□□□□□ -2.21
CCDC7-213ENST00000639290 ETDCA0A1B0GVM5 59 aa1.25□□□□□ -2.21
CCDC7-213ENST00000639290 LEPROTL1O95214 131 aa1.25□□□□□ -2.21
CCDC7-213ENST00000639290 SYNE1Q8NF91 8797 aaKnown RBP1.24□□□□□ -2.21
CCDC7-213ENST00000639290 SMIM13P0DJ93 91 aa1.24□□□□□ -2.21
CCDC7-213ENST00000639290 ACYP2P14621 99 aa1.24□□□□□ -2.21
CCDC7-213ENST00000639290 KCNQ1DNQ9H478 68 aa1.24□□□□□ -2.21
CCDC7-213ENST00000639290 D6R8Y8 96 aa1.24□□□□□ -2.21
CCDC7-213ENST00000639290 MUSTN1Q8IVN3 82 aa1.24□□□□□ -2.21
CCDC7-213ENST00000639290 MT1MQ8N339 61 aa1.24□□□□□ -2.21
CCDC7-213ENST00000639290 S100ZQ8WXG8 99 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms