RNA–Protein interactions for RNA: ENST00000638914.1

PAX6-245, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 7,300 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-245ENST00000638914 MT1HP80294 61 aa4.81□□□□□ -1.64
PAX6-245ENST00000638914 DNAH1Q9P2D7 4330 aa4.78□□□□□ -1.64
PAX6-245ENST00000638914 HUWE1Q7Z6Z7 4374 aaKnown RBP4.77□□□□□ -1.65
PAX6-245ENST00000638914 VPS13CQ709C8 3753 aa4.75□□□□□ -1.65
PAX6-245ENST00000638914 KRTAP10-5P60370 271 aa4.75□□□□□ -1.65
PAX6-245ENST00000638914 KRTAP10-7P60409 375 aaPredicted RBP4.75□□□□□ -1.65
PAX6-245ENST00000638914 MT2AP02795 61 aa4.73□□□□□ -1.65
PAX6-245ENST00000638914 KRTAP19-4Q3LI73 84 aa4.73□□□□□ -1.65
PAX6-245ENST00000638914 SPRR2GQ9BYE4 73 aa4.73□□□□□ -1.65
PAX6-245ENST00000638914 SPRR2FQ96RM1 72 aa4.71□□□□□ -1.66
PAX6-245ENST00000638914 KRTAP4-1Q9BYQ7 146 aa4.66□□□□□ -1.66
PAX6-245ENST00000638914 ZNF469Q96JG9 3925 aaPredicted RBP4.66□□□□□ -1.66
PAX6-245ENST00000638914 AKAP9Q99996 3911 aa4.64□□□□□ -1.67
PAX6-245ENST00000638914 PLECQ15149 4684 aaKnown RBP4.64□□□□□ -1.67
PAX6-245ENST00000638914 DNAH5Q8TE73 4624 aa4.59□□□□□ -1.67
PAX6-245ENST00000638914 MT1FP04733 61 aa4.57□□□□□ -1.68
PAX6-245ENST00000638914 DNAH11Q96DT5 4516 aa4.53□□□□□ -1.68
PAX6-245ENST00000638914 DNAH9Q9NYC9 4486 aa4.53□□□□□ -1.68
PAX6-245ENST00000638914 DNAH10Q8IVF4 4471 aa4.49□□□□□ -1.69
PAX6-245ENST00000638914 FAT1Q14517 4588 aa4.48□□□□□ -1.69
PAX6-245ENST00000638914 SPRR2EP22531 72 aa4.45□□□□□ -1.7
PAX6-245ENST00000638914 SPRR2BP35325 72 aa4.45□□□□□ -1.7
PAX6-245ENST00000638914 SPRR2AP35326 72 aa4.45□□□□□ -1.7
PAX6-245ENST00000638914 KRTAP19-5Q3LI72 72 aa4.44□□□□□ -1.7
PAX6-245ENST00000638914 CSMD3Q7Z407 3707 aa4.44□□□□□ -1.7
PAX6-245ENST00000638914 DNHD1Q96M86 4753 aa4.43□□□□□ -1.7
PAX6-245ENST00000638914 KRTAP19-8Q3LI54 63 aa4.4□□□□□ -1.71
PAX6-245ENST00000638914 LCE3CQ5T5A8 94 aa4.39□□□□□ -1.71
PAX6-245ENST00000638914 DNAH2Q9P225 4427 aa4.38□□□□□ -1.71
PAX6-245ENST00000638914 KRTAP12-4P60329 112 aa4.35□□□□□ -1.71
PAX6-245ENST00000638914 DNAH17Q9UFH2 4485 aa4.34□□□□□ -1.71
PAX6-245ENST00000638914 SPRR2DP22532 72 aa4.33□□□□□ -1.72
PAX6-245ENST00000638914 LCE2BO14633 110 aa4.33□□□□□ -1.72
PAX6-245ENST00000638914 RYR1P21817 5038 aa4.32□□□□□ -1.72
PAX6-245ENST00000638914 FAT2Q9NYQ8 4349 aa4.31□□□□□ -1.72
PAX6-245ENST00000638914 SACSQ9NZJ4 4579 aa4.27□□□□□ -1.73
PAX6-245ENST00000638914 LRP1BQ9NZR2 4599 aa4.27□□□□□ -1.73
PAX6-245ENST00000638914 KRTAP19-1Q8IUB9 90 aa4.26□□□□□ -1.73
PAX6-245ENST00000638914 VPS13DQ5THJ4 4388 aa4.26□□□□□ -1.73
PAX6-245ENST00000638914 LRP1Q07954 4544 aaKnown RBP4.25□□□□□ -1.73
PAX6-245ENST00000638914 DNAH8Q96JB1 4490 aa4.25□□□□□ -1.73
PAX6-245ENST00000638914 DYNC1H1Q14204 4646 aaKnown RBP4.23□□□□□ -1.73
PAX6-245ENST00000638914 MT1GP13640 62 aa4.22□□□□□ -1.73
PAX6-245ENST00000638914 DYNC2H1Q8NCM8 4307 aaKnown RBP4.21□□□□□ -1.74
PAX6-245ENST00000638914 VPS13BQ7Z7G8 4022 aa4.17□□□□□ -1.74
PAX6-245ENST00000638914 KRTAP9-8Q9BYQ0 159 aa4.15□□□□□ -1.74
PAX6-245ENST00000638914 PRKDCP78527 4128 aaKnown RBP4.15□□□□□ -1.75
PAX6-245ENST00000638914 ANK2Q01484 3957 aa4.14□□□□□ -1.75
PAX6-245ENST00000638914 FAT3Q8TDW7 4589 aa4.14□□□□□ -1.75
PAX6-245ENST00000638914 MT1XP80297 61 aa4.14□□□□□ -1.75
PAX6-245ENST00000638914 MT1BP07438 61 aa4.11□□□□□ -1.75
PAX6-245ENST00000638914 CMYA5Q8N3K9 4069 aa4.11□□□□□ -1.75
PAX6-245ENST00000638914 KMT2AQ03164 3969 aa4.11□□□□□ -1.75
PAX6-245ENST00000638914 APOBP04114 4563 aaKnown RBP4.1□□□□□ -1.75
PAX6-245ENST00000638914 KRTAP9-3Q9BYQ3 159 aa4.08□□□□□ -1.76
PAX6-245ENST00000638914 LCE3BQ5TA77 95 aa4.08□□□□□ -1.76
PAX6-245ENST00000638914 KRTAP17-1Q9BYP8 105 aa4.06□□□□□ -1.76
PAX6-245ENST00000638914 LCE2CQ5TA81 110 aa4.05□□□□□ -1.76
PAX6-245ENST00000638914 STARD9Q9P2P6 4700 aa4.04□□□□□ -1.76
PAX6-245ENST00000638914 LYSTQ99698 3801 aa4.03□□□□□ -1.76
PAX6-245ENST00000638914 RYR3Q15413 4870 aa4.03□□□□□ -1.76
PAX6-245ENST00000638914 DNAH3Q8TD57 4116 aa4.03□□□□□ -1.76
PAX6-245ENST00000638914 LCE2DQ5TA82 110 aaPredicted RBP4.01□□□□□ -1.77
PAX6-245ENST00000638914 KRTAP19-3Q7Z4W3 81 aa3.99□□□□□ -1.77
PAX6-245ENST00000638914 KIAA1109Q2LD37 5005 aa3.98□□□□□ -1.77
PAX6-245ENST00000638914 PKD1P98161 4303 aa3.97□□□□□ -1.77
PAX6-245ENST00000638914 KRTAP9-2Q9BYQ4 174 aa3.96□□□□□ -1.77
PAX6-245ENST00000638914 KRTAP4-8A0A0G2JLE6 195 aa3.94□□□□□ -1.78
PAX6-245ENST00000638914 KRTAP4-8Q9BYQ9 185 aa3.94□□□□□ -1.78
PAX6-245ENST00000638914 LCE3DQ9BYE3 92 aa3.93□□□□□ -1.78
PAX6-245ENST00000638914 DNAH7Q8WXX0 4024 aa3.93□□□□□ -1.78
PAX6-245ENST00000638914 MYCBP2O75592 4640 aa3.92□□□□□ -1.78
PAX6-245ENST00000638914 FRAS1Q86XX4 4008 aa3.92□□□□□ -1.78
PAX6-245ENST00000638914 MT1LQ93083 61 aa3.9□□□□□ -1.78
PAX6-245ENST00000638914 DNAH6Q9C0G6 4158 aa3.9□□□□□ -1.79
PAX6-245ENST00000638914 SYNE1Q8NF91 8797 aaKnown RBP3.88□□□□□ -1.79
PAX6-245ENST00000638914 HERC2O95714 4834 aa3.87□□□□□ -1.79
PAX6-245ENST00000638914 PCLOQ9Y6V0 5065 aa3.87□□□□□ -1.79
PAX6-245ENST00000638914 KRTAP19-6Q3LI70 58 aa3.87□□□□□ -1.79
PAX6-245ENST00000638914 LCE3EQ5T5B0 92 aa3.87□□□□□ -1.79
PAX6-245ENST00000638914 PKHD1L1Q86WI1 4243 aa3.87□□□□□ -1.79
PAX6-245ENST00000638914 RYR2Q92736 4967 aa3.87□□□□□ -1.79
PAX6-245ENST00000638914 KRTAP9-6A0A140TA67 174 aa3.85□□□□□ -1.79
PAX6-245ENST00000638914 MT3P25713 68 aa3.82□□□□□ -1.8
PAX6-245ENST00000638914 EPPK1P58107 5090 aaKnown RBP3.81□□□□□ -1.8
PAX6-245ENST00000638914 HECTD4Q9Y4D8 3996 aa3.81□□□□□ -1.8
PAX6-245ENST00000638914 MT1EP04732 61 aa3.81□□□□□ -1.8
PAX6-245ENST00000638914 BIRC6Q9NR09 4857 aa3.79□□□□□ -1.8
PAX6-245ENST00000638914 HSPG2P98160 4391 aa3.78□□□□□ -1.8
PAX6-245ENST00000638914 MT4P47944 62 aa3.75□□□□□ -1.81
PAX6-245ENST00000638914 HERC1Q15751 4861 aa3.74□□□□□ -1.81
PAX6-245ENST00000638914 KRTAP19-2Q3LHN2 52 aa3.72□□□□□ -1.81
PAX6-245ENST00000638914 MT1MQ8N339 61 aa3.71□□□□□ -1.81
PAX6-245ENST00000638914 LRP2P98164 4655 aa3.71□□□□□ -1.82
PAX6-245ENST00000638914 SPRR5A0A1B0GTR4 108 aa3.7□□□□□ -1.82
PAX6-245ENST00000638914 KRTAP20-1Q3LI63 56 aa3.68□□□□□ -1.82
PAX6-245ENST00000638914 PKHD1P08F94 4074 aa3.68□□□□□ -1.82
PAX6-245ENST00000638914 LCE2AQ5TA79 106 aaPredicted RBP3.66□□□□□ -1.82
PAX6-245ENST00000638914 FLGP20930 4061 aaPredicted RBP3.65□□□□□ -1.82
PAX6-245ENST00000638914 KRTAP9-7A8MTY7 169 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 188.3 ms