RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 NUP188Q5SRE5 1749 aa-0.49□□□□□ -2.49
CCDC7-211ENST00000638889 SPEF2Q9C093 1822 aa-0.49□□□□□ -2.49
CCDC7-211ENST00000638889 CDK5RAP2Q96SN8 1893 aa-0.49□□□□□ -2.49
CCDC7-211ENST00000638889 H3BUT2 72 aa-0.49□□□□□ -2.49
CCDC7-211ENST00000638889 PDCD5O14737 125 aa-0.49□□□□□ -2.49
CCDC7-211ENST00000638889 SMIM13P0DJ93 91 aa-0.49□□□□□ -2.49
CCDC7-211ENST00000638889 S100A10P60903 97 aa-0.49□□□□□ -2.49
CCDC7-211ENST00000638889 PPP3R1P63098 170 aa-0.49□□□□□ -2.49
CCDC7-211ENST00000638889 DEFB114Q30KQ6 69 aa-0.49□□□□□ -2.49
CCDC7-211ENST00000638889 ATP5EP2Q5VTU8 51 aa-0.49□□□□□ -2.49
CCDC7-211ENST00000638889 GTF2H5Q6ZYL4 71 aa-0.49□□□□□ -2.49
CCDC7-211ENST00000638889 SMIM15Q7Z3B0 74 aa-0.49□□□□□ -2.49
CCDC7-211ENST00000638889 LINC00643Q86TS7 51 aa-0.49□□□□□ -2.49
CCDC7-211ENST00000638889 S100ZQ8WXG8 99 aa-0.49□□□□□ -2.49
CCDC7-211ENST00000638889 TMEM203Q969S6 136 aa-0.49□□□□□ -2.49
CCDC7-211ENST00000638889 CHMP6Q96FZ7 201 aa-0.49□□□□□ -2.49
CCDC7-211ENST00000638889 ARHGAP5Q13017 1502 aa-0.49□□□□□ -2.49
CCDC7-211ENST00000638889 URB2Q14146 1524 aaKnown RBP-0.49□□□□□ -2.49
CCDC7-211ENST00000638889 GLI2P10070 1586 aa-0.49□□□□□ -2.49
CCDC7-211ENST00000638889 DIP2BQ9P265 1576 aa-0.49□□□□□ -2.49
CCDC7-211ENST00000638889 KIF14Q15058 1648 aa-0.49□□□□□ -2.49
CCDC7-211ENST00000638889 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.49□□□□□ -2.49
CCDC7-211ENST00000638889 SHPRHQ149N8 1683 aa-0.49□□□□□ -2.49
CCDC7-211ENST00000638889 LMO7Q8WWI1 1683 aa-0.49□□□□□ -2.49
CCDC7-211ENST00000638889 RICTORQ6R327 1708 aa-0.5□□□□□ -2.49
CCDC7-211ENST00000638889 DOT1LQ8TEK3 1739 aa-0.5□□□□□ -2.49
CCDC7-211ENST00000638889 ABCA3Q99758 1704 aa-0.5□□□□□ -2.49
CCDC7-211ENST00000638889 RGPD3A6NKT7 1758 aaPredicted RBP-0.5□□□□□ -2.49
CCDC7-211ENST00000638889 RGPD4Q7Z3J3 1758 aa-0.5□□□□□ -2.49
CCDC7-211ENST00000638889 TCHHQ07283 1943 aa-0.5□□□□□ -2.49
CCDC7-211ENST00000638889 GNG14A0A1W2PPG7 69 aa-0.5□□□□□ -2.49
CCDC7-211ENST00000638889 H3BVH4 76 aa-0.5□□□□□ -2.49
CCDC7-211ENST00000638889 K7EMI3 77 aa-0.5□□□□□ -2.49
CCDC7-211ENST00000638889 HMGN1P05114 100 aa-0.5□□□□□ -2.49
CCDC7-211ENST00000638889 GNG4P50150 75 aa-0.5□□□□□ -2.49
CCDC7-211ENST00000638889 GNG10P50151 68 aa-0.5□□□□□ -2.49
CCDC7-211ENST00000638889 SNRPFP62306 86 aaKnown RBP-0.5□□□□□ -2.49
CCDC7-211ENST00000638889 DEFB124Q8NES8 71 aa-0.5□□□□□ -2.49
CCDC7-211ENST00000638889 TOMM7Q9P0U1 55 aa-0.5□□□□□ -2.49
CCDC7-211ENST00000638889 RGPD1P0DJD0 1748 aa-0.5□□□□□ -2.49
CCDC7-211ENST00000638889 TJP1Q07157 1748 aa-0.5□□□□□ -2.49
CCDC7-211ENST00000638889 ANKRD26Q9UPS8 1709 aa-0.5□□□□□ -2.49
CCDC7-211ENST00000638889 KANTRA0A1W2PQU2 76 aa-0.51□□□□□ -2.49
CCDC7-211ENST00000638889 M0R1W7 72 aa-0.51□□□□□ -2.49
CCDC7-211ENST00000638889 DLEU1O43261 78 aa-0.51□□□□□ -2.49
CCDC7-211ENST00000638889 PPLO60437 1756 aa-0.51□□□□□ -2.49
CCDC7-211ENST00000638889 NFAT5O94916 1531 aa-0.51□□□□□ -2.49
CCDC7-211ENST00000638889 C3P01024 1663 aa-0.51□□□□□ -2.49
CCDC7-211ENST00000638889 EPRSP07814 1512 aaKnown RBP-0.51□□□□□ -2.49
CCDC7-211ENST00000638889 SERF2P84101 59 aa-0.51□□□□□ -2.49
CCDC7-211ENST00000638889 ATXN8Q156A1 80 aa-0.51□□□□□ -2.49
CCDC7-211ENST00000638889 ITSN1Q15811 1721 aa-0.51□□□□□ -2.49
CCDC7-211ENST00000638889 TDRG1Q3Y452 100 aa-0.51□□□□□ -2.49
CCDC7-211ENST00000638889 NCMAPQ5T1S8 102 aa-0.51□□□□□ -2.49
CCDC7-211ENST00000638889 CEP162Q5TB80 1403 aa-0.51□□□□□ -2.49
CCDC7-211ENST00000638889 NRKQ7Z2Y5 1582 aa-0.51□□□□□ -2.49
CCDC7-211ENST00000638889 NRAPQ86VF7 1730 aa-0.51□□□□□ -2.49
CCDC7-211ENST00000638889 TCEAL7Q9BRU2 100 aa-0.51□□□□□ -2.49
CCDC7-211ENST00000638889 INO80Q9ULG1 1556 aaPredicted RBP-0.51□□□□□ -2.49
CCDC7-211ENST00000638889 FOCADQ5VW36 1801 aa-0.52□□□□□ -2.49
CCDC7-211ENST00000638889 DDX60LQ5H9U9 1706 aaKnown RBP-0.52□□□□□ -2.49
CCDC7-211ENST00000638889 NHSQ6T4R5 1651 aa-0.52□□□□□ -2.49
CCDC7-211ENST00000638889 FAM208AQ9UK61 1670 aaKnown RBP-0.52□□□□□ -2.49
CCDC7-211ENST00000638889 MROH1Q8NDA8 1641 aa-0.52□□□□□ -2.49
CCDC7-211ENST00000638889 CC2D2AQ9P2K1 1620 aa-0.52□□□□□ -2.49
CCDC7-211ENST00000638889 TIAM1Q13009 1591 aa-0.52□□□□□ -2.49
CCDC7-211ENST00000638889 DIP2AQ14689 1571 aa-0.52□□□□□ -2.49
CCDC7-211ENST00000638889 TTC37Q6PGP7 1564 aa-0.52□□□□□ -2.49
CCDC7-211ENST00000638889 KDM5DQ9BY66 1539 aa-0.52□□□□□ -2.49
CCDC7-211ENST00000638889 H0YGX0 51 aa-0.52□□□□□ -2.49
CCDC7-211ENST00000638889 CORTO00230 105 aa-0.52□□□□□ -2.49
CCDC7-211ENST00000638889 NDUFA1O15239 70 aa-0.52□□□□□ -2.49
CCDC7-211ENST00000638889 NDUFA2O43678 99 aa-0.52□□□□□ -2.49
CCDC7-211ENST00000638889 TFF3Q07654 80 aa-0.52□□□□□ -2.49
CCDC7-211ENST00000638889 S100A16Q96FQ6 103 aaKnown RBP-0.52□□□□□ -2.49
CCDC7-211ENST00000638889 GNG13Q9P2W3 67 aa-0.52□□□□□ -2.49
CCDC7-211ENST00000638889 GNG8Q9UK08 70 aa-0.52□□□□□ -2.49
CCDC7-211ENST00000638889 LTN1O94822 1766 aa-0.52□□□□□ -2.49
CCDC7-211ENST00000638889 UTRNP46939 3433 aa-0.52□□□□□ -2.49
CCDC7-211ENST00000638889 MADDQ8WXG6 1647 aa-0.53□□□□□ -2.49
CCDC7-211ENST00000638889 EFCAB6Q5THR3 1501 aa-0.53□□□□□ -2.49
CCDC7-211ENST00000638889 LINC00587B1AMM8 73 aa-0.53□□□□□ -2.49
CCDC7-211ENST00000638889 APELAP0DMC3 54 aa-0.53□□□□□ -2.49
CCDC7-211ENST00000638889 DEFB121Q5J5C9 76 aa-0.53□□□□□ -2.49
CCDC7-211ENST00000638889 PYY3Q5JQD4 70 aa-0.53□□□□□ -2.49
CCDC7-211ENST00000638889 Q9H521 79 aa-0.53□□□□□ -2.49
CCDC7-211ENST00000638889 ARFGEF2Q9Y6D5 1785 aa-0.53□□□□□ -2.49
CCDC7-211ENST00000638889 MYO5CQ9NQX4 1742 aa-0.53□□□□□ -2.49
CCDC7-211ENST00000638889 CCDC180Q9P1Z9 1646 aa-0.53□□□□□ -2.49
CCDC7-211ENST00000638889 PEG3Q9GZU2 1588 aa-0.53□□□□□ -2.49
CCDC7-211ENST00000638889 LMTK2Q8IWU2 1503 aa-0.54□□□□□ -2.5
CCDC7-211ENST00000638889 A0A1B0GV90 55 aa-0.54□□□□□ -2.5
CCDC7-211ENST00000638889 LINC01549A6NIU2 74 aa-0.54□□□□□ -2.5
CCDC7-211ENST00000638889 IGIPA6NJ69 53 aa-0.54□□□□□ -2.5
CCDC7-211ENST00000638889 H3BUX3 64 aa-0.54□□□□□ -2.5
CCDC7-211ENST00000638889 HTN3P15516 51 aa-0.54□□□□□ -2.5
CCDC7-211ENST00000638889 PLNP26678 52 aa-0.54□□□□□ -2.5
CCDC7-211ENST00000638889 PKIAP61925 76 aa-0.54□□□□□ -2.5
CCDC7-211ENST00000638889 ADIRFQ15847 76 aa-0.54□□□□□ -2.5
CCDC7-211ENST00000638889 ST20Q9HBF5 79 aa-0.54□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms