RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-238	ENST00000637276	MT1HL1	P0DM35	61 aa		7.02	□□□□□ -1.29
CACNA1A-238	ENST00000637276	KRTAP3-2	Q9BYR7	98 aa		6.99	□□□□□ -1.29
CACNA1A-238	ENST00000637276	KRTAP10-7	P60409	375 aa	Predicted RBP	6.95	□□□□□ -1.3
CACNA1A-238	ENST00000637276	SPRR2F	Q96RM1	72 aa		6.81	□□□□□ -1.32
CACNA1A-238	ENST00000637276	ALMS1	Q8TCU4	4167 aa		6.77	□□□□□ -1.33
CACNA1A-238	ENST00000637276	ZNF469	Q96JG9	3925 aa	Predicted RBP	6.63	□□□□□ -1.35
CACNA1A-238	ENST00000637276	FRAS1	Q86XX4	4008 aa		6.58	□□□□□ -1.36
CACNA1A-238	ENST00000637276	KRTAP10-4	P60372	401 aa	Predicted RBP	6.55	□□□□□ -1.36
CACNA1A-238	ENST00000637276	SPRR2E	P22531	72 aa		6.5	□□□□□ -1.37
CACNA1A-238	ENST00000637276	SPRR2B	P35325	72 aa		6.5	□□□□□ -1.37
CACNA1A-238	ENST00000637276	SPRR2A	P35326	72 aa		6.5	□□□□□ -1.37
CACNA1A-238	ENST00000637276	LCE3B	Q5TA77	95 aa		6.5	□□□□□ -1.37
CACNA1A-238	ENST00000637276	DNAH2	Q9P225	4427 aa		6.48	□□□□□ -1.37
CACNA1A-238	ENST00000637276	KRTAP19-5	Q3LI72	72 aa		6.45	□□□□□ -1.38
CACNA1A-238	ENST00000637276	DNAH1	Q9P2D7	4330 aa		6.43	□□□□□ -1.38
CACNA1A-238	ENST00000637276	DNAH10	Q8IVF4	4471 aa		6.42	□□□□□ -1.38
CACNA1A-238	ENST00000637276	ANK2	Q01484	3957 aa		6.41	□□□□□ -1.38
CACNA1A-238	ENST00000637276	KRTAP4-1	Q9BYQ7	146 aa		6.37	□□□□□ -1.39
CACNA1A-238	ENST00000637276	KRTAP23-1	A1A580	65 aa		6.36	□□□□□ -1.39
CACNA1A-238	ENST00000637276	DNAH9	Q9NYC9	4486 aa		6.36	□□□□□ -1.39
CACNA1A-238	ENST00000637276	MT1H	P80294	61 aa		6.35	□□□□□ -1.39
CACNA1A-238	ENST00000637276	DNAH3	Q8TD57	4116 aa		6.34	□□□□□ -1.39
CACNA1A-238	ENST00000637276	DNAH8	Q96JB1	4490 aa		6.27	□□□□□ -1.41
CACNA1A-238	ENST00000637276	KMT2A	Q03164	3969 aa		6.25	□□□□□ -1.41
CACNA1A-238	ENST00000637276	SPRR2D	P22532	72 aa		6.23	□□□□□ -1.41
CACNA1A-238	ENST00000637276	CMYA5	Q8N3K9	4069 aa		6.17	□□□□□ -1.42
CACNA1A-238	ENST00000637276	MT2A	P02795	61 aa		6.16	□□□□□ -1.42
CACNA1A-238	ENST00000637276	MT1G	P13640	62 aa		6.16	□□□□□ -1.42
CACNA1A-238	ENST00000637276	VPS13B	Q7Z7G8	4022 aa		6.15	□□□□□ -1.42
CACNA1A-238	ENST00000637276	LCE3C	Q5T5A8	94 aa		6.15	□□□□□ -1.43
CACNA1A-238	ENST00000637276	SPRR5	A0A1B0GTR4	108 aa		6.12	□□□□□ -1.43
CACNA1A-238	ENST00000637276	MT1F	P04733	61 aa		6.09	□□□□□ -1.43
CACNA1A-238	ENST00000637276	DNAH5	Q8TE73	4624 aa		6.09	□□□□□ -1.43
CACNA1A-238	ENST00000637276	FAT1	Q14517	4588 aa		6.08	□□□□□ -1.44
CACNA1A-238	ENST00000637276	FAT2	Q9NYQ8	4349 aa		6.07	□□□□□ -1.44
CACNA1A-238	ENST00000637276	LYST	Q99698	3801 aa		6.07	□□□□□ -1.44
CACNA1A-238	ENST00000637276	DNAH7	Q8WXX0	4024 aa		6.06	□□□□□ -1.44
CACNA1A-238	ENST00000637276	DNAH11	Q96DT5	4516 aa		6.04	□□□□□ -1.44
CACNA1A-238	ENST00000637276	LCE2B	O14633	110 aa		6.03	□□□□□ -1.44
CACNA1A-238	ENST00000637276	PLEC	Q15149	4684 aa	Known RBP	5.99	□□□□□ -1.45
CACNA1A-238	ENST00000637276	DNAH17	Q9UFH2	4485 aa		5.97	□□□□□ -1.45
CACNA1A-238	ENST00000637276	SPRR2G	Q9BYE4	73 aa		5.96	□□□□□ -1.45
CACNA1A-238	ENST00000637276	PRKDC	P78527	4128 aa	Known RBP	5.96	□□□□□ -1.46
CACNA1A-238	ENST00000637276	DNAH6	Q9C0G6	4158 aa		5.92	□□□□□ -1.46
CACNA1A-238	ENST00000637276	KRTAP12-4	P60329	112 aa		5.91	□□□□□ -1.46
CACNA1A-238	ENST00000637276	MT4	P47944	62 aa		5.9	□□□□□ -1.46
CACNA1A-238	ENST00000637276	STARD9	Q9P2P6	4700 aa		5.86	□□□□□ -1.47
CACNA1A-238	ENST00000637276	DYNC2H1	Q8NCM8	4307 aa	Known RBP	5.83	□□□□□ -1.48
CACNA1A-238	ENST00000637276	LCE2C	Q5TA81	110 aa		5.82	□□□□□ -1.48
CACNA1A-238	ENST00000637276	DNHD1	Q96M86	4753 aa		5.82	□□□□□ -1.48
CACNA1A-238	ENST00000637276	LRP1B	Q9NZR2	4599 aa		5.8	□□□□□ -1.48
CACNA1A-238	ENST00000637276	VPS13D	Q5THJ4	4388 aa		5.8	□□□□□ -1.48
CACNA1A-238	ENST00000637276	KRTAP4-8	A0A0G2JLE6	195 aa		5.79	□□□□□ -1.48
CACNA1A-238	ENST00000637276	KRTAP4-8	Q9BYQ9	185 aa		5.79	□□□□□ -1.48
CACNA1A-238	ENST00000637276	LCE2D	Q5TA82	110 aa	Predicted RBP	5.77	□□□□□ -1.49
CACNA1A-238	ENST00000637276	LCE3E	Q5T5B0	92 aa		5.73	□□□□□ -1.49
CACNA1A-238	ENST00000637276	LCE1B	Q5T7P3	118 aa		5.71	□□□□□ -1.5
CACNA1A-238	ENST00000637276	APOB	P04114	4563 aa	Known RBP	5.71	□□□□□ -1.5
CACNA1A-238	ENST00000637276	HECTD4	Q9Y4D8	3996 aa		5.7	□□□□□ -1.5
CACNA1A-238	ENST00000637276	SACS	Q9NZJ4	4579 aa		5.65	□□□□□ -1.5
CACNA1A-238	ENST00000637276	LCE3D	Q9BYE3	92 aa		5.64	□□□□□ -1.51
CACNA1A-238	ENST00000637276	FAT3	Q8TDW7	4589 aa		5.64	□□□□□ -1.51
CACNA1A-238	ENST00000637276	MYCBP2	O75592	4640 aa		5.61	□□□□□ -1.51
CACNA1A-238	ENST00000637276	KRTAP4-7	Q9BYR0	210 aa		5.58	□□□□□ -1.52
CACNA1A-238	ENST00000637276	RYR1	P21817	5038 aa		5.57	□□□□□ -1.52
CACNA1A-238	ENST00000637276	LCE1D	Q5T752	114 aa		5.57	□□□□□ -1.52
CACNA1A-238	ENST00000637276	KRTAP19-1	Q8IUB9	90 aa		5.56	□□□□□ -1.52
CACNA1A-238	ENST00000637276	LPA	P08519	4548 aa		5.55	□□□□□ -1.52
CACNA1A-238	ENST00000637276	DYNC1H1	Q14204	4646 aa	Known RBP	5.53	□□□□□ -1.52
CACNA1A-238	ENST00000637276	MT1X	P80297	61 aa		5.52	□□□□□ -1.53
CACNA1A-238	ENST00000637276	PKD1	P98161	4303 aa		5.49	□□□□□ -1.53
CACNA1A-238	ENST00000637276	HYDIN	Q4G0P3	5121 aa		5.49	□□□□□ -1.53
CACNA1A-238	ENST00000637276	RYR2	Q92736	4967 aa		5.46	□□□□□ -1.53
CACNA1A-238	ENST00000637276	PRM1	P04553	51 aa		5.42	□□□□□ -1.54
CACNA1A-238	ENST00000637276	LOC100996750	A0A140TA64	210 aa		5.42	□□□□□ -1.54
CACNA1A-238	ENST00000637276	KRTAP17-1	Q9BYP8	105 aa		5.42	□□□□□ -1.54
CACNA1A-238	ENST00000637276	LCE5A	Q5TCM9	118 aa		5.37	□□□□□ -1.55
CACNA1A-238	ENST00000637276	LRP1	Q07954	4544 aa	Known RBP	5.36	□□□□□ -1.55
CACNA1A-238	ENST00000637276	KRTAP19-8	Q3LI54	63 aa		5.36	□□□□□ -1.55
CACNA1A-238	ENST00000637276	MT1B	P07438	61 aa		5.35	□□□□□ -1.55
CACNA1A-238	ENST00000637276	KIAA1109	Q2LD37	5005 aa		5.32	□□□□□ -1.56
CACNA1A-238	ENST00000637276	KRTAP9-8	Q9BYQ0	159 aa		5.28	□□□□□ -1.56
CACNA1A-238	ENST00000637276	KRTAP4-3	Q9BYR4	195 aa		5.27	□□□□□ -1.57
CACNA1A-238	ENST00000637276	HSPG2	P98160	4391 aa		5.25	□□□□□ -1.57
CACNA1A-238	ENST00000637276	PKHD1L1	Q86WI1	4243 aa		5.24	□□□□□ -1.57
CACNA1A-238	ENST00000637276	PKHD1	P08F94	4074 aa		5.22	□□□□□ -1.57
CACNA1A-238	ENST00000637276	TNXB	P22105	4242 aa		5.22	□□□□□ -1.57
CACNA1A-238	ENST00000637276	FLG	P20930	4061 aa	Predicted RBP	5.21	□□□□□ -1.58
CACNA1A-238	ENST00000637276	LCE1C	Q5T751	118 aa		5.2	□□□□□ -1.58
CACNA1A-238	ENST00000637276	LCE1E	Q5T753	118 aa		5.2	□□□□□ -1.58
CACNA1A-238	ENST00000637276	LCE1F	Q5T754	118 aa		5.2	□□□□□ -1.58
CACNA1A-238	ENST00000637276	LCE1A	Q5T7P2	110 aa		5.2	□□□□□ -1.58
CACNA1A-238	ENST00000637276	KRTAP19-4	Q3LI73	84 aa		5.19	□□□□□ -1.58
CACNA1A-238	ENST00000637276	KRTAP4-9	Q9BYQ8	210 aa		5.18	□□□□□ -1.58
CACNA1A-238	ENST00000637276	KRTAP9-3	Q9BYQ3	159 aa		5.14	□□□□□ -1.59
CACNA1A-238	ENST00000637276	KMT2C	Q8NEZ4	4911 aa	Known RBP	5.14	□□□□□ -1.59
CACNA1A-238	ENST00000637276	RYR3	Q15413	4870 aa		5.13	□□□□□ -1.59
CACNA1A-238	ENST00000637276	KRTAP19-3	Q7Z4W3	81 aa		5.12	□□□□□ -1.59
CACNA1A-238	ENST00000637276	LRP2	P98164	4655 aa		5.07	□□□□□ -1.6
CACNA1A-238	ENST00000637276	SYNE2	Q8WXH0	6885 aa	Known RBP	5.04	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms