RNA–Protein interactions for RNA: ENST00000636398.1

EFHC1-220, Transcript of EF-hand domain containing 1, humanhuman

TSL 5

Gene EFHC1, Length 1,703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFHC1-220ENST00000636398 TENM3Q9P273 2699 aa1.19□□□□□ -2.22
EFHC1-220ENST00000636398 PRKDCP78527 4128 aaKnown RBP1.19□□□□□ -2.22
EFHC1-220ENST00000636398 COL7A1Q02388 2944 aa1.19□□□□□ -2.22
EFHC1-220ENST00000636398 DEFB4AO15263 64 aa1.18□□□□□ -2.22
EFHC1-220ENST00000636398 SNRPGP62308 76 aaKnown RBP1.18□□□□□ -2.22
EFHC1-220ENST00000636398 DEFB135Q30KP9 77 aa1.18□□□□□ -2.22
EFHC1-220ENST00000636398 APLNQ9ULZ1 77 aa1.18□□□□□ -2.22
EFHC1-220ENST00000636398 H0YAA0 97 aa1.17□□□□□ -2.22
EFHC1-220ENST00000636398 HTN3P15516 51 aa1.17□□□□□ -2.22
EFHC1-220ENST00000636398 SPRR1BP22528 89 aa1.17□□□□□ -2.22
EFHC1-220ENST00000636398 ARHGAP5-AS1Q96IT6 56 aa1.17□□□□□ -2.22
EFHC1-220ENST00000636398 STAB2Q8WWQ8 2551 aa1.16□□□□□ -2.22
EFHC1-220ENST00000636398 CMYA5Q8N3K9 4069 aa1.16□□□□□ -2.22
EFHC1-220ENST00000636398 SPINK4O60575 86 aa1.16□□□□□ -2.22
EFHC1-220ENST00000636398 H1FX-AS1Q4G0G2 97 aa1.16□□□□□ -2.22
EFHC1-220ENST00000636398 H3BUA1 57 aa1.15□□□□□ -2.22
EFHC1-220ENST00000636398 TIMM8BQ9Y5J9 83 aaPredicted RBP1.15□□□□□ -2.22
EFHC1-220ENST00000636398 KMT2CQ8NEZ4 4911 aaKnown RBP1.15□□□□□ -2.23
EFHC1-220ENST00000636398 DEFB131AP59861 70 aa1.15□□□□□ -2.23
EFHC1-220ENST00000636398 RHPN1-AS1Q9BWJ2 59 aa1.15□□□□□ -2.23
EFHC1-220ENST00000636398 RYR3Q15413 4870 aa1.14□□□□□ -2.23
EFHC1-220ENST00000636398 HTN1P15515 57 aa1.14□□□□□ -2.23
EFHC1-220ENST00000636398 LELP1Q5T871 98 aa1.14□□□□□ -2.23
EFHC1-220ENST00000636398 WFDC13Q8IUB5 93 aa1.14□□□□□ -2.23
EFHC1-220ENST00000636398 TMEM167AQ8TBQ9 72 aa1.14□□□□□ -2.23
EFHC1-220ENST00000636398 CSMD3Q7Z407 3707 aa1.13□□□□□ -2.23
EFHC1-220ENST00000636398 DEFB130BP0DP73 79 aa1.13□□□□□ -2.23
EFHC1-220ENST00000636398 DEFB130AP0DP74 79 aa1.13□□□□□ -2.23
EFHC1-220ENST00000636398 DEFB1P60022 68 aa1.13□□□□□ -2.23
EFHC1-220ENST00000636398 WT1-ASQ06250 92 aa1.13□□□□□ -2.23
EFHC1-220ENST00000636398 K7EIM0 57 aa1.12□□□□□ -2.23
EFHC1-220ENST00000636398 LINC00308Q8TCZ7 52 aa1.12□□□□□ -2.23
EFHC1-220ENST00000636398 C6orf48Q9UBA6 75 aa1.12□□□□□ -2.23
EFHC1-220ENST00000636398 DNAH9Q9NYC9 4486 aa1.12□□□□□ -2.23
EFHC1-220ENST00000636398 EPPK1P58107 5090 aaKnown RBP1.12□□□□□ -2.23
EFHC1-220ENST00000636398 SPART-AS1P0CW21 52 aa1.12□□□□□ -2.23
EFHC1-220ENST00000636398 IAPPP10997 89 aa1.12□□□□□ -2.23
EFHC1-220ENST00000636398 PRCDQ00LT1 54 aa1.11□□□□□ -2.23
EFHC1-220ENST00000636398 DNAH3Q8TD57 4116 aa1.11□□□□□ -2.23
EFHC1-220ENST00000636398 HUWE1Q7Z6Z7 4374 aaKnown RBP1.11□□□□□ -2.23
EFHC1-220ENST00000636398 BIRC6Q9NR09 4857 aa1.1□□□□□ -2.23
EFHC1-220ENST00000636398 A0A096LPF7 62 aa1.1□□□□□ -2.23
EFHC1-220ENST00000636398 SMR3BP02814 79 aaPredicted RBP1.1□□□□□ -2.23
EFHC1-220ENST00000636398 NOP10Q9NPE3 64 aaKnown RBP1.1□□□□□ -2.23
EFHC1-220ENST00000636398 STARD9Q9P2P6 4700 aa1.1□□□□□ -2.23
EFHC1-220ENST00000636398 RYR2Q92736 4967 aa1.1□□□□□ -2.23
EFHC1-220ENST00000636398 HYDINQ4G0P3 5121 aa1.09□□□□□ -2.23
EFHC1-220ENST00000636398 DYNC2H1Q8NCM8 4307 aaKnown RBP1.09□□□□□ -2.24
EFHC1-220ENST00000636398 LYSTQ99698 3801 aa1.08□□□□□ -2.24
EFHC1-220ENST00000636398 KLK9Q2XQG4 91 aa1.08□□□□□ -2.24
EFHC1-220ENST00000636398 KRTAP5-7Q6L8G8 165 aa1.08□□□□□ -2.24
EFHC1-220ENST00000636398 SACSQ9NZJ4 4579 aa1.08□□□□□ -2.24
EFHC1-220ENST00000636398 FRAS1Q86XX4 4008 aa1.07□□□□□ -2.24
EFHC1-220ENST00000636398 DNAH7Q8WXX0 4024 aa1.07□□□□□ -2.24
EFHC1-220ENST00000636398 ALMS1Q8TCU4 4167 aa1.07□□□□□ -2.24
EFHC1-220ENST00000636398 DNAH1Q9P2D7 4330 aa1.07□□□□□ -2.24
EFHC1-220ENST00000636398 WFDC10BQ8IUB3 73 aa1.06□□□□□ -2.24
EFHC1-220ENST00000636398 KIAA1109Q2LD37 5005 aa1.06□□□□□ -2.24
EFHC1-220ENST00000636398 KMT2AQ03164 3969 aa1.06□□□□□ -2.24
EFHC1-220ENST00000636398 PLECQ15149 4684 aaKnown RBP1.05□□□□□ -2.24
EFHC1-220ENST00000636398 DMBT1Q9UGM3 2413 aaPredicted RBP1.05□□□□□ -2.24
EFHC1-220ENST00000636398 AHNAKQ09666 5890 aaKnown RBP1.05□□□□□ -2.24
EFHC1-220ENST00000636398 PCLOQ9Y6V0 5065 aa1.05□□□□□ -2.24
EFHC1-220ENST00000636398 HERC2O95714 4834 aa1.04□□□□□ -2.24
EFHC1-220ENST00000636398 DEFB104AQ8WTQ1 72 aa1.04□□□□□ -2.24
EFHC1-220ENST00000636398 SMIM2Q9BVW6 85 aa1.04□□□□□ -2.24
EFHC1-220ENST00000636398 A8MTW9 85 aa1.03□□□□□ -2.24
EFHC1-220ENST00000636398 H3BNG1 76 aa1.03□□□□□ -2.24
EFHC1-220ENST00000636398 KRTAP21-2Q3LI59 83 aa1.03□□□□□ -2.24
EFHC1-220ENST00000636398 CLPSL2Q6UWE3 100 aa1.03□□□□□ -2.24
EFHC1-220ENST00000636398 SRRM2Q9UQ35 2752 aaKnown RBP1.03□□□□□ -2.24
EFHC1-220ENST00000636398 HECTD4Q9Y4D8 3996 aa1.03□□□□□ -2.24
EFHC1-220ENST00000636398 DNAH10Q8IVF4 4471 aa1.03□□□□□ -2.24
EFHC1-220ENST00000636398 ABCA13Q86UQ4 5058 aa1.02□□□□□ -2.25
EFHC1-220ENST00000636398 VPS13DQ5THJ4 4388 aa1.02□□□□□ -2.25
EFHC1-220ENST00000636398 LINC01556Q5JQF7 62 aa1.02□□□□□ -2.25
EFHC1-220ENST00000636398 RYR1P21817 5038 aa1.02□□□□□ -2.25
EFHC1-220ENST00000636398 PKHD1P08F94 4074 aa1.02□□□□□ -2.25
EFHC1-220ENST00000636398 NDUFA1O15239 70 aa1.01□□□□□ -2.25
EFHC1-220ENST00000636398 PKD1P98161 4303 aa1.01□□□□□ -2.25
EFHC1-220ENST00000636398 DNAH2Q9P225 4427 aa1.01□□□□□ -2.25
EFHC1-220ENST00000636398 DYNC1H1Q14204 4646 aaKnown RBP1□□□□□ -2.25
EFHC1-220ENST00000636398 FAT2Q9NYQ8 4349 aa1□□□□□ -2.25
EFHC1-220ENST00000636398 DNAH11Q96DT5 4516 aa1□□□□□ -2.25
EFHC1-220ENST00000636398 HSPG2P98160 4391 aa1□□□□□ -2.25
EFHC1-220ENST00000636398 APOBP04114 4563 aaKnown RBP0.99□□□□□ -2.25
EFHC1-220ENST00000636398 DNAH17Q9UFH2 4485 aa0.99□□□□□ -2.25
EFHC1-220ENST00000636398 DNAH6Q9C0G6 4158 aa0.99□□□□□ -2.25
EFHC1-220ENST00000636398 SPINK6Q6UWN8 80 aa0.98□□□□□ -2.25
EFHC1-220ENST00000636398 LRP1BQ9NZR2 4599 aa0.98□□□□□ -2.25
EFHC1-220ENST00000636398 HERC1Q15751 4861 aa0.98□□□□□ -2.25
EFHC1-220ENST00000636398 DNAH5Q8TE73 4624 aa0.98□□□□□ -2.25
EFHC1-220ENST00000636398 A0A096LNI7 61 aa0.98□□□□□ -2.25
EFHC1-220ENST00000636398 MT1HL1P0DM35 61 aa0.98□□□□□ -2.25
EFHC1-220ENST00000636398 RPL39LQ96EH5 51 aaKnown RBP0.98□□□□□ -2.25
EFHC1-220ENST00000636398 MYCBP2O75592 4640 aa0.97□□□□□ -2.25
EFHC1-220ENST00000636398 FAT1Q14517 4588 aa0.96□□□□□ -2.26
EFHC1-220ENST00000636398 M0QY20 66 aa0.96□□□□□ -2.26
EFHC1-220ENST00000636398 TOMM7Q9P0U1 55 aa0.96□□□□□ -2.26
EFHC1-220ENST00000636398 LRP1Q07954 4544 aaKnown RBP0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms