RNA–Protein interactions for RNA: ENST00000636337.1

SPTAN1-231, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5

Gene SPTAN1, Length 100 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-231	ENST00000636337	LINC01554	Q52M75	96 aa		3.59	□□□□□ -1.83
SPTAN1-231	ENST00000636337	CASC2	Q6XLA1	102 aa		3.59	□□□□□ -1.83
SPTAN1-231	ENST00000636337	NDUFC1	O43677	76 aa		3.58	□□□□□ -1.84
SPTAN1-231	ENST00000636337	COA6	Q5JTJ3	125 aa	Known RBP	3.58	□□□□□ -1.84
SPTAN1-231	ENST00000636337		M0QZ58	72 aa		3.57	□□□□□ -1.84
SPTAN1-231	ENST00000636337	COX8A	P10176	69 aa		3.57	□□□□□ -1.84
SPTAN1-231	ENST00000636337	MT1G	P13640	62 aa		3.57	□□□□□ -1.84
SPTAN1-231	ENST00000636337	COX6C	P09669	75 aa		3.56	□□□□□ -1.84
SPTAN1-231	ENST00000636337	KRTAP20-2	Q3LI61	65 aa		3.56	□□□□□ -1.84
SPTAN1-231	ENST00000636337	HIST3H2BB	Q8N257	126 aa		3.56	□□□□□ -1.84
SPTAN1-231	ENST00000636337	LOC110117498	A0A087WWA1	95 aa		3.55	□□□□□ -1.84
SPTAN1-231	ENST00000636337	PP632	Q6XCG6	107 aa		3.55	□□□□□ -1.84
SPTAN1-231	ENST00000636337	PAM16	Q9Y3D7	125 aa		3.54	□□□□□ -1.84
SPTAN1-231	ENST00000636337	DLEU1	O43261	78 aa		3.53	□□□□□ -1.84
SPTAN1-231	ENST00000636337	BAALC-AS2	P0C853	105 aa		3.53	□□□□□ -1.84
SPTAN1-231	ENST00000636337	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.53	□□□□□ -1.84
SPTAN1-231	ENST00000636337	FXYD2	P54710	66 aa		3.52	□□□□□ -1.85
SPTAN1-231	ENST00000636337	MT1M	Q8N339	61 aa		3.52	□□□□□ -1.85
SPTAN1-231	ENST00000636337		Q8N9L7	120 aa		3.52	□□□□□ -1.85
SPTAN1-231	ENST00000636337	HIGD1B	Q9P298	99 aa		3.52	□□□□□ -1.85
SPTAN1-231	ENST00000636337		K7ERJ3	54 aa		3.5	□□□□□ -1.85
SPTAN1-231	ENST00000636337		P0C880	135 aa		3.5	□□□□□ -1.85
SPTAN1-231	ENST00000636337	KRTAP4-3	Q9BYR4	195 aa		3.5	□□□□□ -1.85
SPTAN1-231	ENST00000636337	JMJD7-PLA2G4B	H0Y9G9	81 aa		3.49	□□□□□ -1.85
SPTAN1-231	ENST00000636337	BPY2	O14599	106 aa		3.49	□□□□□ -1.85
SPTAN1-231	ENST00000636337	C14orf144	Q96I85	54 aa		3.49	□□□□□ -1.85
SPTAN1-231	ENST00000636337	C14orf132	Q9NPU4	83 aa		3.49	□□□□□ -1.85
SPTAN1-231	ENST00000636337	HIST1H2BL	Q99880	126 aa		3.48	□□□□□ -1.85
SPTAN1-231	ENST00000636337		K7EP34	96 aa		3.45	□□□□□ -1.86
SPTAN1-231	ENST00000636337	C20orf197	Q8N268	126 aa		3.45	□□□□□ -1.86
SPTAN1-231	ENST00000636337	SCGB1C2	P0DMR2	95 aa		3.44	□□□□□ -1.86
SPTAN1-231	ENST00000636337	CYP4F30P	Q9H0H9	118 aa		3.43	□□□□□ -1.86
SPTAN1-231	ENST00000636337	BATF	Q16520	125 aa		3.41	□□□□□ -1.86
SPTAN1-231	ENST00000636337	KRTAP19-5	Q3LI72	72 aa		3.41	□□□□□ -1.86
SPTAN1-231	ENST00000636337	KRTAP4-7	Q9BYR0	210 aa		3.41	□□□□□ -1.86
SPTAN1-231	ENST00000636337	KRTAP4-11	Q9BYQ6	195 aa		3.4	□□□□□ -1.87
SPTAN1-231	ENST00000636337	S100A2	P29034	98 aa		3.39	□□□□□ -1.87
SPTAN1-231	ENST00000636337	NAA38	Q9BRA0	125 aa	Known RBP	3.39	□□□□□ -1.87
SPTAN1-231	ENST00000636337	MT1L	Q93083	61 aa		3.38	□□□□□ -1.87
SPTAN1-231	ENST00000636337	ATXN8	Q156A1	80 aa		3.36	□□□□□ -1.87
SPTAN1-231	ENST00000636337	SPATA45	Q537H7	98 aa		3.36	□□□□□ -1.87
SPTAN1-231	ENST00000636337	TP53AIP1	Q9HCN2	124 aa		3.36	□□□□□ -1.87
SPTAN1-231	ENST00000636337	KRTAP5-8	O75690	187 aa		3.35	□□□□□ -1.87
SPTAN1-231	ENST00000636337	MT-ATP8	P03928	68 aa		3.35	□□□□□ -1.87
SPTAN1-231	ENST00000636337	KRTAP12-4	P60329	112 aa		3.35	□□□□□ -1.87
SPTAN1-231	ENST00000636337		A0A1W2PPM0	123 aa		3.34	□□□□□ -1.87
SPTAN1-231	ENST00000636337	ACYP1	P07311	99 aa		3.34	□□□□□ -1.87
SPTAN1-231	ENST00000636337	VAMP8	Q9BV40	100 aa		3.34	□□□□□ -1.87
SPTAN1-231	ENST00000636337	KRTAP3-2	Q9BYR7	98 aa		3.34	□□□□□ -1.87
SPTAN1-231	ENST00000636337	HSD52	Q0P140	79 aa		3.32	□□□□□ -1.88
SPTAN1-231	ENST00000636337	SYNE1	Q8NF91	8797 aa	Known RBP	3.31	□□□□□ -1.88
SPTAN1-231	ENST00000636337	TRAV22	A0A0B4J277	110 aa		3.29	□□□□□ -1.88
SPTAN1-231	ENST00000636337	LOC101927531	A0A1B0GV80	90 aa		3.29	□□□□□ -1.88
SPTAN1-231	ENST00000636337	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.28	□□□□□ -1.88
SPTAN1-231	ENST00000636337		A0A0D9SG42	100 aa		3.26	□□□□□ -1.89
SPTAN1-231	ENST00000636337	CAMK2N1	Q7Z7J9	78 aa		3.25	□□□□□ -1.89
SPTAN1-231	ENST00000636337	KRTAP9-9	Q9BYP9	154 aa		3.25	□□□□□ -1.89
SPTAN1-231	ENST00000636337	OBSCN	Q5VST9	7968 aa		3.22	□□□□□ -1.89
SPTAN1-231	ENST00000636337	S100A6	P06703	90 aa		3.19	□□□□□ -1.9
SPTAN1-231	ENST00000636337	S100A1	P23297	94 aa		3.17	□□□□□ -1.9
SPTAN1-231	ENST00000636337	LOC100996750	A0A140TA64	210 aa		3.15	□□□□□ -1.91
SPTAN1-231	ENST00000636337	TSTD3	H0UI37	97 aa		3.15	□□□□□ -1.91
SPTAN1-231	ENST00000636337	KRTAP5-2	Q701N4	177 aa		3.15	□□□□□ -1.91
SPTAN1-231	ENST00000636337	SPCS1	Q9Y6A9	102 aa		3.15	□□□□□ -1.91
SPTAN1-231	ENST00000636337	UBL5	Q9BZL1	73 aa		3.13	□□□□□ -1.91
SPTAN1-231	ENST00000636337		H0Y9P7	68 aa		3.1	□□□□□ -1.91
SPTAN1-231	ENST00000636337	C10orf95	Q9H7T3	257 aa		3.1	□□□□□ -1.91
SPTAN1-231	ENST00000636337	ATOX1	O00244	68 aa		3.09	□□□□□ -1.91
SPTAN1-231	ENST00000636337		H3BT86	120 aa		3.08	□□□□□ -1.92
SPTAN1-231	ENST00000636337	UQCR10	Q9UDW1	63 aa		3.05	□□□□□ -1.92
SPTAN1-231	ENST00000636337	UQCRQ	O14949	82 aa		3.03	□□□□□ -1.92
SPTAN1-231	ENST00000636337	LCE3A	Q5TA76	89 aa		3.02	□□□□□ -1.93
SPTAN1-231	ENST00000636337	KRTAP13-4	Q3LI77	160 aa		3.01	□□□□□ -1.93
SPTAN1-231	ENST00000636337	LINC00208	Q96KT6	92 aa		2.99	□□□□□ -1.93
SPTAN1-231	ENST00000636337	DMAC1	Q96GE9	116 aa		2.98	□□□□□ -1.93
SPTAN1-231	ENST00000636337	TAX1BP3	O14907	124 aa		2.95	□□□□□ -1.94
SPTAN1-231	ENST00000636337		M0R143	59 aa		2.94	□□□□□ -1.94
SPTAN1-231	ENST00000636337	PYY3	Q5JQD4	70 aa		2.94	□□□□□ -1.94
SPTAN1-231	ENST00000636337	KRTAP5-1	Q6L8H4	278 aa		2.93	□□□□□ -1.94
SPTAN1-231	ENST00000636337	KRTAP9-4	Q9BYQ2	154 aa		2.91	□□□□□ -1.94
SPTAN1-231	ENST00000636337	KRTAP6-1	Q3LI64	71 aa		2.9	□□□□□ -1.95
SPTAN1-231	ENST00000636337	KRTAP6-2	Q3LI66	62 aa		2.9	□□□□□ -1.95
SPTAN1-231	ENST00000636337	TRAV7	A0A075B6U4	112 aa		2.89	□□□□□ -1.95
SPTAN1-231	ENST00000636337	KRTAP12-3	P60328	96 aa		2.89	□□□□□ -1.95
SPTAN1-231	ENST00000636337	SPTSSB	Q8NFR3	76 aa		2.88	□□□□□ -1.95
SPTAN1-231	ENST00000636337	MT1A	P04731	61 aa		2.86	□□□□□ -1.95
SPTAN1-231	ENST00000636337	MP68	P56378	58 aa		2.86	□□□□□ -1.95
SPTAN1-231	ENST00000636337	SPINT4	Q6UDR6	99 aa		2.86	□□□□□ -1.95
SPTAN1-231	ENST00000636337	C9orf118	A6NHY6	69 aa		2.82	□□□□□ -1.96
SPTAN1-231	ENST00000636337	HIST1H4A	P62805	103 aa	Known RBP	2.82	□□□□□ -1.96
SPTAN1-231	ENST00000636337	TNP1	P09430	55 aa		2.8	□□□□□ -1.96
SPTAN1-231	ENST00000636337	ACYP2	P14621	99 aa		2.78	□□□□□ -1.96
SPTAN1-231	ENST00000636337	KRTAP12-1	P59990	96 aa		2.76	□□□□□ -1.97
SPTAN1-231	ENST00000636337	CHKB-CPT1B	H3BT56	60 aa		2.75	□□□□□ -1.97
SPTAN1-231	ENST00000636337	OCR1	Q9BZK8	76 aa		2.74	□□□□□ -1.97
SPTAN1-231	ENST00000636337	SPATA8	Q6RVD6	105 aa		2.73	□□□□□ -1.97
SPTAN1-231	ENST00000636337	PRO0461	Q9UI25	63 aa		2.73	□□□□□ -1.97
SPTAN1-231	ENST00000636337		H3BPC8	53 aa		2.71	□□□□□ -1.98
SPTAN1-231	ENST00000636337	ATP5EP2	Q5VTU8	51 aa		2.7	□□□□□ -1.98
SPTAN1-231	ENST00000636337	MT3	P25713	68 aa		2.64	□□□□□ -1.99

Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms