RNA–Protein interactions for RNA: ENST00000636016.1

EPB41L1-219, Transcript of erythrocyte membrane protein band 4.1 like 1, humanhuman

TSL 2

Gene EPB41L1, Length 6,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L1-219ENST00000636016 MEGF8Q7Z7M0 2845 aa4.11□□□□□ -1.75
EPB41L1-219ENST00000636016 AKAP9Q99996 3911 aa4.1□□□□□ -1.75
EPB41L1-219ENST00000636016 CSMD2Q7Z408 3487 aa4.09□□□□□ -1.76
EPB41L1-219ENST00000636016 HUWE1Q7Z6Z7 4374 aaKnown RBP4.08□□□□□ -1.76
EPB41L1-219ENST00000636016 OTOGQ6ZRI0 2925 aa4.08□□□□□ -1.76
EPB41L1-219ENST00000636016 KRTAP19-4Q3LI73 84 aa4.07□□□□□ -1.76
EPB41L1-219ENST00000636016 ALMS1Q8TCU4 4167 aa4.07□□□□□ -1.76
EPB41L1-219ENST00000636016 COL7A1Q02388 2944 aa4.04□□□□□ -1.76
EPB41L1-219ENST00000636016 KRTAP10-7P60409 375 aaPredicted RBP4.02□□□□□ -1.77
EPB41L1-219ENST00000636016 TRRAPQ9Y4A5 3859 aa4.01□□□□□ -1.77
EPB41L1-219ENST00000636016 LCE2AQ5TA79 106 aaPredicted RBP3.92□□□□□ -1.78
EPB41L1-219ENST00000636016 CSMD3Q7Z407 3707 aa3.91□□□□□ -1.78
EPB41L1-219ENST00000636016 KRTAP4-1Q9BYQ7 146 aa3.88□□□□□ -1.79
EPB41L1-219ENST00000636016 MT1HP80294 61 aa3.88□□□□□ -1.79
EPB41L1-219ENST00000636016 ZNF469Q96JG9 3925 aaPredicted RBP3.87□□□□□ -1.79
EPB41L1-219ENST00000636016 DNAH5Q8TE73 4624 aa3.84□□□□□ -1.8
EPB41L1-219ENST00000636016 SPRR2FQ96RM1 72 aa3.83□□□□□ -1.8
EPB41L1-219ENST00000636016 MT2AP02795 61 aa3.81□□□□□ -1.8
EPB41L1-219ENST00000636016 DNAH2Q9P225 4427 aa3.8□□□□□ -1.8
EPB41L1-219ENST00000636016 DNAH10Q8IVF4 4471 aa3.79□□□□□ -1.8
EPB41L1-219ENST00000636016 DNAH9Q9NYC9 4486 aa3.79□□□□□ -1.8
EPB41L1-219ENST00000636016 KRTAP19-5Q3LI72 72 aa3.78□□□□□ -1.8
EPB41L1-219ENST00000636016 MT3P25713 68 aa3.78□□□□□ -1.8
EPB41L1-219ENST00000636016 LCE3BQ5TA77 95 aa3.78□□□□□ -1.8
EPB41L1-219ENST00000636016 DNAH3Q8TD57 4116 aa3.76□□□□□ -1.81
EPB41L1-219ENST00000636016 SPRR2GQ9BYE4 73 aa3.76□□□□□ -1.81
EPB41L1-219ENST00000636016 DNAH1Q9P2D7 4330 aa3.75□□□□□ -1.81
EPB41L1-219ENST00000636016 MT1FP04733 61 aa3.73□□□□□ -1.81
EPB41L1-219ENST00000636016 DNAH11Q96DT5 4516 aa3.73□□□□□ -1.81
EPB41L1-219ENST00000636016 PLECQ15149 4684 aaKnown RBP3.72□□□□□ -1.81
EPB41L1-219ENST00000636016 LCE3CQ5T5A8 94 aa3.72□□□□□ -1.81
EPB41L1-219ENST00000636016 ANK2Q01484 3957 aa3.7□□□□□ -1.82
EPB41L1-219ENST00000636016 CMYA5Q8N3K9 4069 aa3.7□□□□□ -1.82
EPB41L1-219ENST00000636016 DNAH17Q9UFH2 4485 aa3.68□□□□□ -1.82
EPB41L1-219ENST00000636016 VPS13DQ5THJ4 4388 aa3.66□□□□□ -1.82
EPB41L1-219ENST00000636016 KRTAP12-4P60329 112 aa3.66□□□□□ -1.82
EPB41L1-219ENST00000636016 DYNC2H1Q8NCM8 4307 aaKnown RBP3.65□□□□□ -1.83
EPB41L1-219ENST00000636016 SPRR2EP22531 72 aa3.63□□□□□ -1.83
EPB41L1-219ENST00000636016 SPRR2BP35325 72 aa3.63□□□□□ -1.83
EPB41L1-219ENST00000636016 SPRR2AP35326 72 aa3.63□□□□□ -1.83
EPB41L1-219ENST00000636016 FAT1Q14517 4588 aa3.62□□□□□ -1.83
EPB41L1-219ENST00000636016 DYNC1H1Q14204 4646 aaKnown RBP3.59□□□□□ -1.83
EPB41L1-219ENST00000636016 DNAH6Q9C0G6 4158 aa3.58□□□□□ -1.84
EPB41L1-219ENST00000636016 DNAH8Q96JB1 4490 aa3.58□□□□□ -1.84
EPB41L1-219ENST00000636016 SACSQ9NZJ4 4579 aa3.57□□□□□ -1.84
EPB41L1-219ENST00000636016 MT1GP13640 62 aa3.56□□□□□ -1.84
EPB41L1-219ENST00000636016 LRP1BQ9NZR2 4599 aa3.55□□□□□ -1.84
EPB41L1-219ENST00000636016 FRAS1Q86XX4 4008 aa3.54□□□□□ -1.84
EPB41L1-219ENST00000636016 FAT2Q9NYQ8 4349 aa3.53□□□□□ -1.84
EPB41L1-219ENST00000636016 STARD9Q9P2P6 4700 aa3.53□□□□□ -1.84
EPB41L1-219ENST00000636016 SPRR2DP22532 72 aa3.52□□□□□ -1.85
EPB41L1-219ENST00000636016 LYSTQ99698 3801 aa3.51□□□□□ -1.85
EPB41L1-219ENST00000636016 RYR1P21817 5038 aa3.5□□□□□ -1.85
EPB41L1-219ENST00000636016 DNAH7Q8WXX0 4024 aa3.48□□□□□ -1.85
EPB41L1-219ENST00000636016 HECTD4Q9Y4D8 3996 aa3.48□□□□□ -1.85
EPB41L1-219ENST00000636016 APOBP04114 4563 aaKnown RBP3.46□□□□□ -1.85
EPB41L1-219ENST00000636016 DNHD1Q96M86 4753 aa3.46□□□□□ -1.86
EPB41L1-219ENST00000636016 KRTAP19-8Q3LI54 63 aa3.45□□□□□ -1.86
EPB41L1-219ENST00000636016 KMT2AQ03164 3969 aa3.44□□□□□ -1.86
EPB41L1-219ENST00000636016 PRKDCP78527 4128 aaKnown RBP3.43□□□□□ -1.86
EPB41L1-219ENST00000636016 KRTAP19-1Q8IUB9 90 aa3.43□□□□□ -1.86
EPB41L1-219ENST00000636016 LCE3DQ9BYE3 92 aa3.42□□□□□ -1.86
EPB41L1-219ENST00000636016 MT1XP80297 61 aa3.42□□□□□ -1.86
EPB41L1-219ENST00000636016 VPS13BQ7Z7G8 4022 aa3.39□□□□□ -1.87
EPB41L1-219ENST00000636016 RYR3Q15413 4870 aa3.38□□□□□ -1.87
EPB41L1-219ENST00000636016 LCE3EQ5T5B0 92 aa3.37□□□□□ -1.87
EPB41L1-219ENST00000636016 MT1BP07438 61 aa3.35□□□□□ -1.87
EPB41L1-219ENST00000636016 LRP1Q07954 4544 aaKnown RBP3.34□□□□□ -1.87
EPB41L1-219ENST00000636016 KRTAP4-8A0A0G2JLE6 195 aa3.34□□□□□ -1.87
EPB41L1-219ENST00000636016 KRTAP4-8Q9BYQ9 185 aa3.34□□□□□ -1.87
EPB41L1-219ENST00000636016 FAT3Q8TDW7 4589 aa3.34□□□□□ -1.87
EPB41L1-219ENST00000636016 HERC1Q15751 4861 aa3.33□□□□□ -1.88
EPB41L1-219ENST00000636016 PRM1P04553 51 aa3.33□□□□□ -1.88
EPB41L1-219ENST00000636016 KRTAP17-1Q9BYP8 105 aa3.33□□□□□ -1.88
EPB41L1-219ENST00000636016 KRTAP9-8Q9BYQ0 159 aa3.29□□□□□ -1.88
EPB41L1-219ENST00000636016 MYCBP2O75592 4640 aa3.26□□□□□ -1.89
EPB41L1-219ENST00000636016 PKHD1L1Q86WI1 4243 aa3.25□□□□□ -1.89
EPB41L1-219ENST00000636016 KRTAP4-7Q9BYR0 210 aa3.25□□□□□ -1.89
EPB41L1-219ENST00000636016 KRTAP9-3Q9BYQ3 159 aa3.24□□□□□ -1.89
EPB41L1-219ENST00000636016 PKD1P98161 4303 aa3.23□□□□□ -1.89
EPB41L1-219ENST00000636016 LCE1BQ5T7P3 118 aa3.22□□□□□ -1.89
EPB41L1-219ENST00000636016 BIRC6Q9NR09 4857 aa3.21□□□□□ -1.9
EPB41L1-219ENST00000636016 MT4P47944 62 aa3.2□□□□□ -1.9
EPB41L1-219ENST00000636016 HSPG2P98160 4391 aa3.19□□□□□ -1.9
EPB41L1-219ENST00000636016 SPRR5A0A1B0GTR4 108 aa3.19□□□□□ -1.9
EPB41L1-219ENST00000636016 RYR2Q92736 4967 aa3.19□□□□□ -1.9
EPB41L1-219ENST00000636016 KRTAP19-3Q7Z4W3 81 aa3.19□□□□□ -1.9
EPB41L1-219ENST00000636016 PKHD1P08F94 4074 aa3.16□□□□□ -1.9
EPB41L1-219ENST00000636016 HYDINQ4G0P3 5121 aa3.15□□□□□ -1.9
EPB41L1-219ENST00000636016 LCE1DQ5T752 114 aa3.14□□□□□ -1.91
EPB41L1-219ENST00000636016 MT1LQ93083 61 aa3.12□□□□□ -1.91
EPB41L1-219ENST00000636016 LOC100996750A0A140TA64 210 aa3.12□□□□□ -1.91
EPB41L1-219ENST00000636016 TNXBP22105 4242 aa3.11□□□□□ -1.91
EPB41L1-219ENST00000636016 KIAA1109Q2LD37 5005 aa3.1□□□□□ -1.91
EPB41L1-219ENST00000636016 MT1EP04732 61 aa3.09□□□□□ -1.91
EPB41L1-219ENST00000636016 LCE4AQ5TA78 99 aa3.08□□□□□ -1.92
EPB41L1-219ENST00000636016 LPAP08519 4548 aa3.07□□□□□ -1.92
EPB41L1-219ENST00000636016 KRTAP4-9Q9BYQ8 210 aa3.03□□□□□ -1.92
EPB41L1-219ENST00000636016 KRTAP9-2Q9BYQ4 174 aa3.02□□□□□ -1.93
EPB41L1-219ENST00000636016 PCLOQ9Y6V0 5065 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms