RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 S4R3F8 94 aa0.27□□□□□ -2.37
SMARCB1-209ENST00000635578 TEX49A0A1B0GTD5 131 aa0.26□□□□□ -2.37
SMARCB1-209ENST00000635578 A0A1W2PPM0 123 aa0.26□□□□□ -2.37
SMARCB1-209ENST00000635578 TMEM218A2RU14 115 aa0.26□□□□□ -2.37
SMARCB1-209ENST00000635578 LINC01546A6NGU7 62 aa0.26□□□□□ -2.37
SMARCB1-209ENST00000635578 HCG22E2RYF7 251 aa0.26□□□□□ -2.37
SMARCB1-209ENST00000635578 H0YAA0 97 aa0.26□□□□□ -2.37
SMARCB1-209ENST00000635578 HIST1H2BKO60814 126 aa0.26□□□□□ -2.37
SMARCB1-209ENST00000635578 NDUFC2O95298 119 aa0.26□□□□□ -2.37
SMARCB1-209ENST00000635578 TRACP01848 142 aa0.26□□□□□ -2.37
SMARCB1-209ENST00000635578 MT-ND4LP03901 98 aa0.26□□□□□ -2.37
SMARCB1-209ENST00000635578 MT1EP04732 61 aa0.26□□□□□ -2.37
SMARCB1-209ENST00000635578 CCKP06307 115 aa0.26□□□□□ -2.37
SMARCB1-209ENST00000635578 HIST1H2BJP06899 126 aa0.26□□□□□ -2.37
SMARCB1-209ENST00000635578 FABP2P12104 132 aa0.26□□□□□ -2.37
SMARCB1-209ENST00000635578 HIST1H2BOP23527 126 aa0.26□□□□□ -2.37
SMARCB1-209ENST00000635578 S100PP25815 95 aa0.26□□□□□ -2.37
SMARCB1-209ENST00000635578 HIST1H2BBP33778 126 aa0.26□□□□□ -2.37
SMARCB1-209ENST00000635578 AKR1D1P51857 326 aa0.26□□□□□ -2.37
SMARCB1-209ENST00000635578 HIST1H2BDP58876 126 aa0.26□□□□□ -2.37
SMARCB1-209ENST00000635578 HIST1H2BCP62807 126 aa0.26□□□□□ -2.37
SMARCB1-209ENST00000635578 SEC11AP67812 179 aa0.26□□□□□ -2.37
SMARCB1-209ENST00000635578 PEA15Q15121 130 aa0.26□□□□□ -2.37
SMARCB1-209ENST00000635578 HIST2H2BEQ16778 126 aa0.26□□□□□ -2.37
SMARCB1-209ENST00000635578 KRTAP19-7Q3SYF9 63 aa0.26□□□□□ -2.37
SMARCB1-209ENST00000635578 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.26□□□□□ -2.37
SMARCB1-209ENST00000635578 LINC01545Q5VT33 79 aa0.26□□□□□ -2.37
SMARCB1-209ENST00000635578 SSBP3-AS1Q7Z2R9 100 aa0.26□□□□□ -2.37
SMARCB1-209ENST00000635578 MT1MQ8N339 61 aa0.26□□□□□ -2.37
SMARCB1-209ENST00000635578 HIST1H2BHQ93079 126 aa0.26□□□□□ -2.37
SMARCB1-209ENST00000635578 HIST1H2BNQ99877 126 aa0.26□□□□□ -2.37
SMARCB1-209ENST00000635578 HIST1H2BMQ99879 126 aa0.26□□□□□ -2.37
SMARCB1-209ENST00000635578 GNB1LQ9BYB4 327 aa0.26□□□□□ -2.37
SMARCB1-209ENST00000635578 SPRR2GQ9BYE4 73 aa0.26□□□□□ -2.37
SMARCB1-209ENST00000635578 C14orf132Q9NPU4 83 aa0.26□□□□□ -2.37
SMARCB1-209ENST00000635578 LAMTOR2Q9Y2Q5 125 aa0.26□□□□□ -2.37
SMARCB1-209ENST00000635578 hADV29S1A0JD25 119 aa0.25□□□□□ -2.37
SMARCB1-209ENST00000635578 LINC01549A6NIU2 74 aa0.25□□□□□ -2.37
SMARCB1-209ENST00000635578 H3BMG7 143 aa0.25□□□□□ -2.37
SMARCB1-209ENST00000635578 SYS1-DBNDD2H3BUS1 97 aa0.25□□□□□ -2.37
SMARCB1-209ENST00000635578 M0QZ58 72 aa0.25□□□□□ -2.37
SMARCB1-209ENST00000635578 TCL1BO95988 128 aa0.25□□□□□ -2.37
SMARCB1-209ENST00000635578 PLNP26678 52 aa0.25□□□□□ -2.37
SMARCB1-209ENST00000635578 S100A12P80511 92 aa0.25□□□□□ -2.37
SMARCB1-209ENST00000635578 COX17Q14061 63 aa0.25□□□□□ -2.37
SMARCB1-209ENST00000635578 RHEBQ15382 184 aa0.25□□□□□ -2.37
SMARCB1-209ENST00000635578 Q1T7F1 81 aa0.25□□□□□ -2.37
SMARCB1-209ENST00000635578 KRTAP20-2Q3LI61 65 aa0.25□□□□□ -2.37
SMARCB1-209ENST00000635578 KRTAP19-5Q3LI72 72 aa0.25□□□□□ -2.37
SMARCB1-209ENST00000635578 CLLU1Q5K131 121 aa0.25□□□□□ -2.37
SMARCB1-209ENST00000635578 LYRM7Q5U5X0 104 aa0.25□□□□□ -2.37
SMARCB1-209ENST00000635578 LINC00575Q6W349 94 aa0.25□□□□□ -2.37
SMARCB1-209ENST00000635578 Q6ZQT0 140 aa0.25□□□□□ -2.37
SMARCB1-209ENST00000635578 KRTAP19-3Q7Z4W3 81 aa0.25□□□□□ -2.37
SMARCB1-209ENST00000635578 RAB37Q96AX2 223 aa0.25□□□□□ -2.37
SMARCB1-209ENST00000635578 LINC00846Q9NV44 126 aa0.25□□□□□ -2.37
SMARCB1-209ENST00000635578 SS18L2Q9UHA2 77 aa0.25□□□□□ -2.37
SMARCB1-209ENST00000635578 TRBV7-6A0A0J9YX20 115 aa0.24□□□□□ -2.37
SMARCB1-209ENST00000635578 TRBV7-4A0A0J9YYF1 115 aa0.24□□□□□ -2.37
SMARCB1-209ENST00000635578 A0A1B0GW54 56 aa0.24□□□□□ -2.37
SMARCB1-209ENST00000635578 HSBP1L1C9JCN9 74 aa0.24□□□□□ -2.37
SMARCB1-209ENST00000635578 MT1GP13640 62 aa0.24□□□□□ -2.37
SMARCB1-209ENST00000635578 BATFQ16520 125 aa0.24□□□□□ -2.37
SMARCB1-209ENST00000635578 H1FX-AS1Q4G0G2 97 aa0.24□□□□□ -2.37
SMARCB1-209ENST00000635578 SPATA45Q537H7 98 aa0.24□□□□□ -2.37
SMARCB1-209ENST00000635578 OCIAD2Q56VL3 154 aa0.24□□□□□ -2.37
SMARCB1-209ENST00000635578 Q5XG85 94 aa0.24□□□□□ -2.37
SMARCB1-209ENST00000635578 Q6JHZ5 121 aa0.24□□□□□ -2.37
SMARCB1-209ENST00000635578 TEN1Q86WV5 123 aa0.24□□□□□ -2.37
SMARCB1-209ENST00000635578 PRR15Q8IV56 129 aa0.24□□□□□ -2.37
SMARCB1-209ENST00000635578 HIST3H2BBQ8N257 126 aa0.24□□□□□ -2.37
SMARCB1-209ENST00000635578 TMEM254Q8TBM7 123 aa0.24□□□□□ -2.37
SMARCB1-209ENST00000635578 MT1LQ93083 61 aa0.24□□□□□ -2.37
SMARCB1-209ENST00000635578 CHCHD1Q96BP2 118 aaKnown RBP0.24□□□□□ -2.37
SMARCB1-209ENST00000635578 C14orf144Q96I85 54 aa0.24□□□□□ -2.37
SMARCB1-209ENST00000635578 MRPL34Q9BQ48 92 aaKnown RBP0.24□□□□□ -2.37
SMARCB1-209ENST00000635578 SNHG12Q9BXW3 62 aa0.24□□□□□ -2.37
SMARCB1-209ENST00000635578 SPCS1Q9Y6A9 102 aa0.24□□□□□ -2.37
SMARCB1-209ENST00000635578 hDV103S1A0JD37 113 aa0.23□□□□□ -2.37
SMARCB1-209ENST00000635578 C9JAW5 83 aa0.23□□□□□ -2.37
SMARCB1-209ENST00000635578 DNAL4O96015 105 aa0.23□□□□□ -2.37
SMARCB1-209ENST00000635578 BAALC-AS2P0C853 105 aa0.23□□□□□ -2.37
SMARCB1-209ENST00000635578 IFITM1P13164 125 aa0.23□□□□□ -2.37
SMARCB1-209ENST00000635578 KRTAP6-1Q3LI64 71 aa0.23□□□□□ -2.37
SMARCB1-209ENST00000635578 CASC2Q6XLA1 102 aa0.23□□□□□ -2.37
SMARCB1-209ENST00000635578 ANKRD29Q8N6D5 301 aa0.23□□□□□ -2.37
SMARCB1-209ENST00000635578 HIST1H2BLQ99880 126 aa0.23□□□□□ -2.37
SMARCB1-209ENST00000635578 C10orf95Q9H7T3 257 aa0.23□□□□□ -2.37
SMARCB1-209ENST00000635578 ORMDL1Q9P0S3 153 aa0.23□□□□□ -2.37
SMARCB1-209ENST00000635578 A0A0D9SG42 100 aa0.22□□□□□ -2.37
SMARCB1-209ENST00000635578 H0Y9P7 68 aa0.22□□□□□ -2.37
SMARCB1-209ENST00000635578 MT-ATP8P03928 68 aa0.22□□□□□ -2.37
SMARCB1-209ENST00000635578 COX8AP10176 69 aa0.22□□□□□ -2.37
SMARCB1-209ENST00000635578 PDE6GP18545 87 aa0.22□□□□□ -2.37
SMARCB1-209ENST00000635578 HSD52Q0P140 79 aa0.22□□□□□ -2.37
SMARCB1-209ENST00000635578 PYY3Q5JQD4 70 aa0.22□□□□□ -2.37
SMARCB1-209ENST00000635578 BVES-AS1Q5T3Y7 98 aa0.22□□□□□ -2.37
SMARCB1-209ENST00000635578 SVBPQ8N300 66 aa0.22□□□□□ -2.37
SMARCB1-209ENST00000635578 DSCR8Q96T75 97 aa0.22□□□□□ -2.37
SMARCB1-209ENST00000635578 VAMP8Q9BV40 100 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms