RNA–Protein interactions for RNA: ENST00000634348.1

SRSF4-208, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 5

Gene SRSF4, Length 8,128 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-208ENST00000634348 LORP23490 312 aaPredicted RBP4.77□□□□□ -1.65
SRSF4-208ENST00000634348 HUWE1Q7Z6Z7 4374 aaKnown RBP4.66□□□□□ -1.66
SRSF4-208ENST00000634348 KRTAP10-7P60409 375 aaPredicted RBP4.63□□□□□ -1.67
SRSF4-208ENST00000634348 KRTAP8-1Q8IUC2 63 aa4.63□□□□□ -1.67
SRSF4-208ENST00000634348 ZNF469Q96JG9 3925 aaPredicted RBP4.61□□□□□ -1.67
SRSF4-208ENST00000634348 KRTAP10-4P60372 401 aaPredicted RBP4.55□□□□□ -1.68
SRSF4-208ENST00000634348 AKAP9Q99996 3911 aa4.53□□□□□ -1.68
SRSF4-208ENST00000634348 DNAH2Q9P225 4427 aa4.39□□□□□ -1.71
SRSF4-208ENST00000634348 KRTAP4-1Q9BYQ7 146 aa4.38□□□□□ -1.71
SRSF4-208ENST00000634348 SPRR2FQ96RM1 72 aa4.34□□□□□ -1.71
SRSF4-208ENST00000634348 LCE3CQ5T5A8 94 aa4.34□□□□□ -1.72
SRSF4-208ENST00000634348 DNAH1Q9P2D7 4330 aa4.32□□□□□ -1.72
SRSF4-208ENST00000634348 DNAH10Q8IVF4 4471 aa4.32□□□□□ -1.72
SRSF4-208ENST00000634348 FAT1Q14517 4588 aa4.31□□□□□ -1.72
SRSF4-208ENST00000634348 ALMS1Q8TCU4 4167 aa4.31□□□□□ -1.72
SRSF4-208ENST00000634348 DNAH8Q96JB1 4490 aa4.3□□□□□ -1.72
SRSF4-208ENST00000634348 MT1HP80294 61 aa4.29□□□□□ -1.72
SRSF4-208ENST00000634348 LYSTQ99698 3801 aa4.29□□□□□ -1.72
SRSF4-208ENST00000634348 KRTAP19-5Q3LI72 72 aa4.29□□□□□ -1.72
SRSF4-208ENST00000634348 VPS13BQ7Z7G8 4022 aa4.29□□□□□ -1.72
SRSF4-208ENST00000634348 DNAH5Q8TE73 4624 aa4.27□□□□□ -1.73
SRSF4-208ENST00000634348 KRTAP12-4P60329 112 aa4.27□□□□□ -1.73
SRSF4-208ENST00000634348 DNAH9Q9NYC9 4486 aa4.27□□□□□ -1.73
SRSF4-208ENST00000634348 MT3P25713 68 aa4.27□□□□□ -1.73
SRSF4-208ENST00000634348 DNAH11Q96DT5 4516 aa4.26□□□□□ -1.73
SRSF4-208ENST00000634348 MT2AP02795 61 aa4.24□□□□□ -1.73
SRSF4-208ENST00000634348 ANK2Q01484 3957 aa4.23□□□□□ -1.73
SRSF4-208ENST00000634348 KRTAP19-4Q3LI73 84 aa4.22□□□□□ -1.73
SRSF4-208ENST00000634348 FRAS1Q86XX4 4008 aa4.2□□□□□ -1.74
SRSF4-208ENST00000634348 PLECQ15149 4684 aaKnown RBP4.2□□□□□ -1.74
SRSF4-208ENST00000634348 KMT2AQ03164 3969 aa4.2□□□□□ -1.74
SRSF4-208ENST00000634348 CMYA5Q8N3K9 4069 aa4.19□□□□□ -1.74
SRSF4-208ENST00000634348 MT1FP04733 61 aa4.19□□□□□ -1.74
SRSF4-208ENST00000634348 LCE3BQ5TA77 95 aa4.14□□□□□ -1.75
SRSF4-208ENST00000634348 SPRR2GQ9BYE4 73 aa4.13□□□□□ -1.75
SRSF4-208ENST00000634348 DNAH17Q9UFH2 4485 aa4.12□□□□□ -1.75
SRSF4-208ENST00000634348 DNAH7Q8WXX0 4024 aa4.1□□□□□ -1.75
SRSF4-208ENST00000634348 LRP1BQ9NZR2 4599 aa4.04□□□□□ -1.76
SRSF4-208ENST00000634348 MYCBP2O75592 4640 aa4.04□□□□□ -1.76
SRSF4-208ENST00000634348 FAT2Q9NYQ8 4349 aa4.03□□□□□ -1.76
SRSF4-208ENST00000634348 APOBP04114 4563 aaKnown RBP4.03□□□□□ -1.76
SRSF4-208ENST00000634348 FAT3Q8TDW7 4589 aa4.02□□□□□ -1.77
SRSF4-208ENST00000634348 SPRR2EP22531 72 aa4.02□□□□□ -1.77
SRSF4-208ENST00000634348 SPRR2BP35325 72 aa4.02□□□□□ -1.77
SRSF4-208ENST00000634348 SPRR2AP35326 72 aa4.02□□□□□ -1.77
SRSF4-208ENST00000634348 LCE3DQ9BYE3 92 aa4.02□□□□□ -1.77
SRSF4-208ENST00000634348 STARD9Q9P2P6 4700 aa4.01□□□□□ -1.77
SRSF4-208ENST00000634348 MT1GP13640 62 aa4□□□□□ -1.77
SRSF4-208ENST00000634348 DNAH3Q8TD57 4116 aa4□□□□□ -1.77
SRSF4-208ENST00000634348 PRKDCP78527 4128 aaKnown RBP3.98□□□□□ -1.77
SRSF4-208ENST00000634348 SACSQ9NZJ4 4579 aa3.97□□□□□ -1.77
SRSF4-208ENST00000634348 LCE3EQ5T5B0 92 aa3.97□□□□□ -1.77
SRSF4-208ENST00000634348 DNHD1Q96M86 4753 aa3.96□□□□□ -1.77
SRSF4-208ENST00000634348 RYR1P21817 5038 aa3.95□□□□□ -1.78
SRSF4-208ENST00000634348 VPS13DQ5THJ4 4388 aa3.94□□□□□ -1.78
SRSF4-208ENST00000634348 DNAH6Q9C0G6 4158 aa3.93□□□□□ -1.78
SRSF4-208ENST00000634348 KRTAP4-8A0A0G2JLE6 195 aa3.91□□□□□ -1.78
SRSF4-208ENST00000634348 KRTAP4-8Q9BYQ9 185 aa3.91□□□□□ -1.78
SRSF4-208ENST00000634348 DYNC2H1Q8NCM8 4307 aaKnown RBP3.88□□□□□ -1.79
SRSF4-208ENST00000634348 DYNC1H1Q14204 4646 aaKnown RBP3.88□□□□□ -1.79
SRSF4-208ENST00000634348 SPRR5A0A1B0GTR4 108 aa3.87□□□□□ -1.79
SRSF4-208ENST00000634348 SPRR2DP22532 72 aa3.86□□□□□ -1.79
SRSF4-208ENST00000634348 KRTAP19-1Q8IUB9 90 aa3.85□□□□□ -1.79
SRSF4-208ENST00000634348 LCE2BO14633 110 aa3.83□□□□□ -1.8
SRSF4-208ENST00000634348 HECTD4Q9Y4D8 3996 aa3.82□□□□□ -1.8
SRSF4-208ENST00000634348 MT1XP80297 61 aa3.82□□□□□ -1.8
SRSF4-208ENST00000634348 PRM1P04553 51 aa3.81□□□□□ -1.8
SRSF4-208ENST00000634348 LRP1Q07954 4544 aaKnown RBP3.81□□□□□ -1.8
SRSF4-208ENST00000634348 KRTAP4-7Q9BYR0 210 aa3.75□□□□□ -1.81
SRSF4-208ENST00000634348 KRTAP17-1Q9BYP8 105 aa3.75□□□□□ -1.81
SRSF4-208ENST00000634348 KRTAP19-8Q3LI54 63 aa3.72□□□□□ -1.81
SRSF4-208ENST00000634348 MT1BP07438 61 aa3.71□□□□□ -1.82
SRSF4-208ENST00000634348 LPAP08519 4548 aa3.7□□□□□ -1.82
SRSF4-208ENST00000634348 FLGP20930 4061 aaPredicted RBP3.66□□□□□ -1.82
SRSF4-208ENST00000634348 KRTAP9-8Q9BYQ0 159 aa3.65□□□□□ -1.82
SRSF4-208ENST00000634348 LRP2P98164 4655 aa3.65□□□□□ -1.83
SRSF4-208ENST00000634348 PKHD1P08F94 4074 aa3.64□□□□□ -1.83
SRSF4-208ENST00000634348 LCE2CQ5TA81 110 aa3.61□□□□□ -1.83
SRSF4-208ENST00000634348 MT4P47944 62 aa3.6□□□□□ -1.83
SRSF4-208ENST00000634348 LCE2DQ5TA82 110 aaPredicted RBP3.59□□□□□ -1.84
SRSF4-208ENST00000634348 RYR3Q15413 4870 aa3.58□□□□□ -1.84
SRSF4-208ENST00000634348 SYNE1Q8NF91 8797 aaKnown RBP3.58□□□□□ -1.84
SRSF4-208ENST00000634348 LOC100996750A0A140TA64 210 aa3.55□□□□□ -1.84
SRSF4-208ENST00000634348 KRTAP9-3Q9BYQ3 159 aa3.55□□□□□ -1.84
SRSF4-208ENST00000634348 PKD1P98161 4303 aa3.54□□□□□ -1.84
SRSF4-208ENST00000634348 LCE1BQ5T7P3 118 aa3.54□□□□□ -1.84
SRSF4-208ENST00000634348 KRTAP19-3Q7Z4W3 81 aa3.52□□□□□ -1.85
SRSF4-208ENST00000634348 KRTAP4-3Q9BYR4 195 aa3.5□□□□□ -1.85
SRSF4-208ENST00000634348 MT1LQ93083 61 aa3.49□□□□□ -1.85
SRSF4-208ENST00000634348 HSPG2P98160 4391 aa3.48□□□□□ -1.85
SRSF4-208ENST00000634348 LCE1DQ5T752 114 aa3.48□□□□□ -1.85
SRSF4-208ENST00000634348 FSIP2Q5CZC0 6907 aa3.45□□□□□ -1.86
SRSF4-208ENST00000634348 SYNE2Q8WXH0 6885 aaKnown RBP3.45□□□□□ -1.86
SRSF4-208ENST00000634348 KIAA1109Q2LD37 5005 aa3.44□□□□□ -1.86
SRSF4-208ENST00000634348 MT1EP04732 61 aa3.43□□□□□ -1.86
SRSF4-208ENST00000634348 KRTAP4-9Q9BYQ8 210 aa3.4□□□□□ -1.87
SRSF4-208ENST00000634348 PKHD1L1Q86WI1 4243 aa3.39□□□□□ -1.87
SRSF4-208ENST00000634348 MT1MQ8N339 61 aa3.36□□□□□ -1.87
SRSF4-208ENST00000634348 KMT2CQ8NEZ4 4911 aaKnown RBP3.35□□□□□ -1.87
SRSF4-208ENST00000634348 TNXBP22105 4242 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms