RNA–Protein interactions for RNA: ENST00000631006.2

SRGAP1-207, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SRGAP1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-207ENST00000631006 MT3P25713 68 aa2.85□□□□□ -1.95
SRGAP1-207ENST00000631006 KRTAP12-3P60328 96 aa2.83□□□□□ -1.96
SRGAP1-207ENST00000631006 MT1HL1P0DM35 61 aa2.83□□□□□ -1.96
SRGAP1-207ENST00000631006 ALMS1Q8TCU4 4167 aa2.81□□□□□ -1.96
SRGAP1-207ENST00000631006 KRTAP10-5P60370 271 aa2.8□□□□□ -1.96
SRGAP1-207ENST00000631006 KRTAP4-5Q9BYR2 181 aa2.8□□□□□ -1.96
SRGAP1-207ENST00000631006 LCE3AQ5TA76 89 aa2.78□□□□□ -1.97
SRGAP1-207ENST00000631006 ANK3Q12955 4377 aaKnown RBP2.73□□□□□ -1.97
SRGAP1-207ENST00000631006 ZNF469Q96JG9 3925 aaPredicted RBP2.72□□□□□ -1.97
SRGAP1-207ENST00000631006 KRTAP10-7P60409 375 aaPredicted RBP2.67□□□□□ -1.98
SRGAP1-207ENST00000631006 LCE2AQ5TA79 106 aaPredicted RBP2.66□□□□□ -1.98
SRGAP1-207ENST00000631006 HUWE1Q7Z6Z7 4374 aaKnown RBP2.66□□□□□ -1.98
SRGAP1-207ENST00000631006 ANK2Q01484 3957 aa2.65□□□□□ -1.98
SRGAP1-207ENST00000631006 DNAH7Q8WXX0 4024 aa2.65□□□□□ -1.99
SRGAP1-207ENST00000631006 SPRR2FQ96RM1 72 aa2.65□□□□□ -1.99
SRGAP1-207ENST00000631006 DNAH3Q8TD57 4116 aa2.64□□□□□ -1.99
SRGAP1-207ENST00000631006 CMYA5Q8N3K9 4069 aa2.63□□□□□ -1.99
SRGAP1-207ENST00000631006 DNAH1Q9P2D7 4330 aa2.62□□□□□ -1.99
SRGAP1-207ENST00000631006 KRTAP10-4P60372 401 aaPredicted RBP2.62□□□□□ -1.99
SRGAP1-207ENST00000631006 HECTD4Q9Y4D8 3996 aa2.61□□□□□ -1.99
SRGAP1-207ENST00000631006 LYSTQ99698 3801 aa2.6□□□□□ -1.99
SRGAP1-207ENST00000631006 DNAH6Q9C0G6 4158 aa2.59□□□□□ -2
SRGAP1-207ENST00000631006 MT1HP80294 61 aa2.57□□□□□ -2
SRGAP1-207ENST00000631006 SPRR2EP22531 72 aa2.56□□□□□ -2
SRGAP1-207ENST00000631006 SPRR2BP35325 72 aa2.56□□□□□ -2
SRGAP1-207ENST00000631006 SPRR2AP35326 72 aa2.56□□□□□ -2
SRGAP1-207ENST00000631006 VPS13BQ7Z7G8 4022 aa2.51□□□□□ -2.01
SRGAP1-207ENST00000631006 KMT2AQ03164 3969 aa2.5□□□□□ -2.01
SRGAP1-207ENST00000631006 MT2AP02795 61 aa2.5□□□□□ -2.01
SRGAP1-207ENST00000631006 DNAH2Q9P225 4427 aa2.49□□□□□ -2.01
SRGAP1-207ENST00000631006 KRTAP19-5Q3LI72 72 aa2.49□□□□□ -2.01
SRGAP1-207ENST00000631006 SPRR2DP22532 72 aa2.48□□□□□ -2.01
SRGAP1-207ENST00000631006 FRAS1Q86XX4 4008 aa2.48□□□□□ -2.01
SRGAP1-207ENST00000631006 DNAH9Q9NYC9 4486 aa2.45□□□□□ -2.02
SRGAP1-207ENST00000631006 KRTAP4-1Q9BYQ7 146 aa2.45□□□□□ -2.02
SRGAP1-207ENST00000631006 PRKDCP78527 4128 aaKnown RBP2.45□□□□□ -2.02
SRGAP1-207ENST00000631006 LCE3CQ5T5A8 94 aa2.43□□□□□ -2.02
SRGAP1-207ENST00000631006 SPRR2GQ9BYE4 73 aa2.43□□□□□ -2.02
SRGAP1-207ENST00000631006 MT1FP04733 61 aa2.42□□□□□ -2.02
SRGAP1-207ENST00000631006 KRTAP12-4P60329 112 aa2.4□□□□□ -2.03
SRGAP1-207ENST00000631006 FAT2Q9NYQ8 4349 aa2.39□□□□□ -2.03
SRGAP1-207ENST00000631006 LCE3BQ5TA77 95 aa2.38□□□□□ -2.03
SRGAP1-207ENST00000631006 DYNC2H1Q8NCM8 4307 aaKnown RBP2.37□□□□□ -2.03
SRGAP1-207ENST00000631006 DNAH10Q8IVF4 4471 aa2.36□□□□□ -2.03
SRGAP1-207ENST00000631006 VPS13DQ5THJ4 4388 aa2.35□□□□□ -2.03
SRGAP1-207ENST00000631006 STARD9Q9P2P6 4700 aa2.31□□□□□ -2.04
SRGAP1-207ENST00000631006 MT1GP13640 62 aa2.3□□□□□ -2.04
SRGAP1-207ENST00000631006 PLECQ15149 4684 aaKnown RBP2.3□□□□□ -2.04
SRGAP1-207ENST00000631006 DNAH5Q8TE73 4624 aa2.29□□□□□ -2.04
SRGAP1-207ENST00000631006 DNAH11Q96DT5 4516 aa2.29□□□□□ -2.04
SRGAP1-207ENST00000631006 SPRR5A0A1B0GTR4 108 aa2.26□□□□□ -2.05
SRGAP1-207ENST00000631006 DNAH17Q9UFH2 4485 aa2.25□□□□□ -2.05
SRGAP1-207ENST00000631006 PKHD1P08F94 4074 aa2.25□□□□□ -2.05
SRGAP1-207ENST00000631006 FLGP20930 4061 aaPredicted RBP2.25□□□□□ -2.05
SRGAP1-207ENST00000631006 KRTAP19-1Q8IUB9 90 aa2.24□□□□□ -2.05
SRGAP1-207ENST00000631006 DYNC1H1Q14204 4646 aaKnown RBP2.22□□□□□ -2.05
SRGAP1-207ENST00000631006 KRTAP19-8Q3LI54 63 aa2.21□□□□□ -2.06
SRGAP1-207ENST00000631006 LCE3DQ9BYE3 92 aa2.2□□□□□ -2.06
SRGAP1-207ENST00000631006 PKHD1L1Q86WI1 4243 aa2.2□□□□□ -2.06
SRGAP1-207ENST00000631006 DNAH8Q96JB1 4490 aa2.2□□□□□ -2.06
SRGAP1-207ENST00000631006 HYDINQ4G0P3 5121 aa2.19□□□□□ -2.06
SRGAP1-207ENST00000631006 MT4P47944 62 aa2.19□□□□□ -2.06
SRGAP1-207ENST00000631006 KRTAP17-1Q9BYP8 105 aa2.19□□□□□ -2.06
SRGAP1-207ENST00000631006 LRP1BQ9NZR2 4599 aa2.19□□□□□ -2.06
SRGAP1-207ENST00000631006 MT1XP80297 61 aa2.17□□□□□ -2.06
SRGAP1-207ENST00000631006 RYR1P21817 5038 aa2.15□□□□□ -2.06
SRGAP1-207ENST00000631006 LCE3EQ5T5B0 92 aa2.15□□□□□ -2.06
SRGAP1-207ENST00000631006 LCE4AQ5TA78 99 aa2.14□□□□□ -2.07
SRGAP1-207ENST00000631006 LRP1Q07954 4544 aaKnown RBP2.14□□□□□ -2.07
SRGAP1-207ENST00000631006 KRTAP4-8A0A0G2JLE6 195 aa2.14□□□□□ -2.07
SRGAP1-207ENST00000631006 KRTAP4-8Q9BYQ9 185 aa2.14□□□□□ -2.07
SRGAP1-207ENST00000631006 DNHD1Q96M86 4753 aa2.12□□□□□ -2.07
SRGAP1-207ENST00000631006 MT1BP07438 61 aa2.12□□□□□ -2.07
SRGAP1-207ENST00000631006 FAT1Q14517 4588 aa2.11□□□□□ -2.07
SRGAP1-207ENST00000631006 KRTAP19-3Q7Z4W3 81 aa2.11□□□□□ -2.07
SRGAP1-207ENST00000631006 KIAA1109Q2LD37 5005 aa2.1□□□□□ -2.07
SRGAP1-207ENST00000631006 LCE1BQ5T7P3 118 aa2.1□□□□□ -2.07
SRGAP1-207ENST00000631006 SACSQ9NZJ4 4579 aa2.1□□□□□ -2.07
SRGAP1-207ENST00000631006 KRTAP9-8Q9BYQ0 159 aa2.09□□□□□ -2.07
SRGAP1-207ENST00000631006 KRTAP9-2Q9BYQ4 174 aa2.08□□□□□ -2.08
SRGAP1-207ENST00000631006 FAT3Q8TDW7 4589 aa2.08□□□□□ -2.08
SRGAP1-207ENST00000631006 PKD1P98161 4303 aa2.08□□□□□ -2.08
SRGAP1-207ENST00000631006 TNXBP22105 4242 aa2.08□□□□□ -2.08
SRGAP1-207ENST00000631006 KRTAP9-3Q9BYQ3 159 aa2.08□□□□□ -2.08
SRGAP1-207ENST00000631006 LCE1DQ5T752 114 aa2.07□□□□□ -2.08
SRGAP1-207ENST00000631006 APOBP04114 4563 aaKnown RBP2.07□□□□□ -2.08
SRGAP1-207ENST00000631006 KRTAP9-6A0A140TA67 174 aa2.07□□□□□ -2.08
SRGAP1-207ENST00000631006 HERC1Q15751 4861 aa2.07□□□□□ -2.08
SRGAP1-207ENST00000631006 KRTAP20-1Q3LI63 56 aa2.05□□□□□ -2.08
SRGAP1-207ENST00000631006 HSPG2P98160 4391 aa2.03□□□□□ -2.08
SRGAP1-207ENST00000631006 MT1LQ93083 61 aa2.02□□□□□ -2.09
SRGAP1-207ENST00000631006 LCE5AQ5TCM9 118 aa2.02□□□□□ -2.09
SRGAP1-207ENST00000631006 RYR3Q15413 4870 aa2.01□□□□□ -2.09
SRGAP1-207ENST00000631006 MT1EP04732 61 aa2□□□□□ -2.09
SRGAP1-207ENST00000631006 MYCBP2O75592 4640 aa1.99□□□□□ -2.09
SRGAP1-207ENST00000631006 KRTAP4-7Q9BYR0 210 aa1.99□□□□□ -2.09
SRGAP1-207ENST00000631006 LOC100996750A0A140TA64 210 aa1.98□□□□□ -2.09
SRGAP1-207ENST00000631006 KRTAP4-6Q9BYQ5 205 aa1.98□□□□□ -2.09
SRGAP1-207ENST00000631006 KRTAP19-6Q3LI70 58 aa1.98□□□□□ -2.09
SRGAP1-207ENST00000631006 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 162.9 ms