RNA–Protein interactions for RNA: ENST00000625849.2

TCF4-250, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-250ENST00000625849 MYO18BQ8IUG5 2567 aa1.52□□□□□ -2.17
TCF4-250ENST00000625849 KRTAP12-1P59990 96 aa1.52□□□□□ -2.17
TCF4-250ENST00000625849 CRYBG3Q68DQ2 2970 aa1.52□□□□□ -2.17
TCF4-250ENST00000625849 MEGF8Q7Z7M0 2845 aa1.52□□□□□ -2.17
TCF4-250ENST00000625849 SONP18583 2426 aaKnown RBP1.51□□□□□ -2.17
TCF4-250ENST00000625849 VPS13CQ709C8 3753 aa1.51□□□□□ -2.17
TCF4-250ENST00000625849 NF1P21359 2839 aa1.51□□□□□ -2.17
TCF4-250ENST00000625849 RELNP78509 3460 aa1.51□□□□□ -2.17
TCF4-250ENST00000625849 USP24Q9UPU5 2620 aa1.51□□□□□ -2.17
TCF4-250ENST00000625849 COL6A5A8TX70 2615 aa1.5□□□□□ -2.17
TCF4-250ENST00000625849 KRTAP13-4Q3LI77 160 aa1.5□□□□□ -2.17
TCF4-250ENST00000625849 Q5VSD8 79 aa1.5□□□□□ -2.17
TCF4-250ENST00000625849 ABCA12Q86UK0 2595 aa1.5□□□□□ -2.17
TCF4-250ENST00000625849 ZFYVE26Q68DK2 2539 aa1.49□□□□□ -2.17
TCF4-250ENST00000625849 ITPR3Q14573 2671 aa1.49□□□□□ -2.17
TCF4-250ENST00000625849 A0A0D9SG42 100 aa1.49□□□□□ -2.17
TCF4-250ENST00000625849 ANK2Q01484 3957 aa1.49□□□□□ -2.17
TCF4-250ENST00000625849 HELZ2Q9BYK8 2649 aaKnown RBP1.48□□□□□ -2.17
TCF4-250ENST00000625849 MTORP42345 2549 aa1.48□□□□□ -2.17
TCF4-250ENST00000625849 SVEP1Q4LDE5 3571 aa1.48□□□□□ -2.17
TCF4-250ENST00000625849 TENM4Q6N022 2769 aa1.47□□□□□ -2.17
TCF4-250ENST00000625849 FRAS1Q86XX4 4008 aa1.47□□□□□ -2.17
TCF4-250ENST00000625849 TRRAPQ9Y4A5 3859 aa1.47□□□□□ -2.17
TCF4-250ENST00000625849 MXRA5Q9NR99 2828 aa1.47□□□□□ -2.17
TCF4-250ENST00000625849 CSMD2Q7Z408 3487 aa1.46□□□□□ -2.18
TCF4-250ENST00000625849 HECTD1Q9ULT8 2610 aa1.46□□□□□ -2.18
TCF4-250ENST00000625849 KRTAP21-3Q3LHN1 58 aa1.46□□□□□ -2.18
TCF4-250ENST00000625849 KRTAP13-2Q52LG2 175 aa1.46□□□□□ -2.18
TCF4-250ENST00000625849 NIPBLQ6KC79 2804 aaeCLIP1.45□□□□□ -2.18
TCF4-250ENST00000625849 SETD2Q9BYW2 2564 aaPredicted RBP1.45□□□□□ -2.18
TCF4-250ENST00000625849 DNAH8Q96JB1 4490 aa1.45□□□□□ -2.18
TCF4-250ENST00000625849 LRRK2Q5S007 2527 aa1.45□□□□□ -2.18
TCF4-250ENST00000625849 DYNC2H1Q8NCM8 4307 aaKnown RBP1.44□□□□□ -2.18
TCF4-250ENST00000625849 PRKDCP78527 4128 aaKnown RBP1.44□□□□□ -2.18
TCF4-250ENST00000625849 NBEAL2Q6ZNJ1 2754 aa1.44□□□□□ -2.18
TCF4-250ENST00000625849 CSMD3Q7Z407 3707 aa1.44□□□□□ -2.18
TCF4-250ENST00000625849 CUBNO60494 3623 aa1.44□□□□□ -2.18
TCF4-250ENST00000625849 HIVEP1P15822 2718 aa1.43□□□□□ -2.18
TCF4-250ENST00000625849 SRRM2Q9UQ35 2752 aaKnown RBP1.42□□□□□ -2.18
TCF4-250ENST00000625849 CFAP46Q8IYW2 2715 aa1.42□□□□□ -2.18
TCF4-250ENST00000625849 TGP01266 2768 aa1.42□□□□□ -2.18
TCF4-250ENST00000625849 DNAH7Q8WXX0 4024 aa1.42□□□□□ -2.18
TCF4-250ENST00000625849 DNAH3Q8TD57 4116 aa1.42□□□□□ -2.18
TCF4-250ENST00000625849 FBN2P35556 2912 aa1.41□□□□□ -2.18
TCF4-250ENST00000625849 CMYA5Q8N3K9 4069 aa1.41□□□□□ -2.18
TCF4-250ENST00000625849 DNAH6Q9C0G6 4158 aa1.41□□□□□ -2.18
TCF4-250ENST00000625849 DNAH17Q9UFH2 4485 aa1.4□□□□□ -2.18
TCF4-250ENST00000625849 SMR3AQ99954 134 aa1.4□□□□□ -2.19
TCF4-250ENST00000625849 ACANP16112 2415 aa1.4□□□□□ -2.19
TCF4-250ENST00000625849 NBEAL1Q6ZS30 2694 aa1.4□□□□□ -2.19
TCF4-250ENST00000625849 USP9YO00507 2555 aaPredicted RBP1.4□□□□□ -2.19
TCF4-250ENST00000625849 DNAH9Q9NYC9 4486 aa1.39□□□□□ -2.19
TCF4-250ENST00000625849 DNAH2Q9P225 4427 aa1.39□□□□□ -2.19
TCF4-250ENST00000625849 POLQO75417 2590 aa1.39□□□□□ -2.19
TCF4-250ENST00000625849 PDZD2O15018 2839 aa1.39□□□□□ -2.19
TCF4-250ENST00000625849 C9orf92A6NGG3 77 aa1.39□□□□□ -2.19
TCF4-250ENST00000625849 TNP1P09430 55 aa1.39□□□□□ -2.19
TCF4-250ENST00000625849 DNAH10Q8IVF4 4471 aa1.39□□□□□ -2.19
TCF4-250ENST00000625849 HUWE1Q7Z6Z7 4374 aaKnown RBP1.38□□□□□ -2.19
TCF4-250ENST00000625849 DNAH11Q96DT5 4516 aa1.38□□□□□ -2.19
TCF4-250ENST00000625849 LYSTQ99698 3801 aa1.38□□□□□ -2.19
TCF4-250ENST00000625849 ZANQ9Y493 2812 aa1.38□□□□□ -2.19
TCF4-250ENST00000625849 COL7A1Q02388 2944 aa1.37□□□□□ -2.19
TCF4-250ENST00000625849 ITPR2Q14571 2701 aa1.37□□□□□ -2.19
TCF4-250ENST00000625849 ATRQ13535 2644 aa1.36□□□□□ -2.19
TCF4-250ENST00000625849 IGSF10Q6WRI0 2623 aa1.35□□□□□ -2.19
TCF4-250ENST00000625849 PKD1L1Q8TDX9 2849 aa1.35□□□□□ -2.19
TCF4-250ENST00000625849 NOTCH1P46531 2555 aa1.35□□□□□ -2.19
TCF4-250ENST00000625849 FLNCQ14315 2725 aa1.34□□□□□ -2.19
TCF4-250ENST00000625849 DNHD1Q96M86 4753 aa1.34□□□□□ -2.19
TCF4-250ENST00000625849 STAB2Q8WWQ8 2551 aa1.34□□□□□ -2.2
TCF4-250ENST00000625849 DMBT1Q9UGM3 2413 aaPredicted RBP1.34□□□□□ -2.2
TCF4-250ENST00000625849 HECTD4Q9Y4D8 3996 aa1.33□□□□□ -2.2
TCF4-250ENST00000625849 FLNAP21333 2647 aaKnown RBP1.33□□□□□ -2.2
TCF4-250ENST00000625849 TENM3Q9P273 2699 aa1.32□□□□□ -2.2
TCF4-250ENST00000625849 KMT2AQ03164 3969 aa1.32□□□□□ -2.2
TCF4-250ENST00000625849 MYCBP2O75592 4640 aa1.32□□□□□ -2.2
TCF4-250ENST00000625849 STAB1Q9NY15 2570 aa1.32□□□□□ -2.2
TCF4-250ENST00000625849 SACSQ9NZJ4 4579 aa1.31□□□□□ -2.2
TCF4-250ENST00000625849 J3QKU1 62 aa1.3□□□□□ -2.2
TCF4-250ENST00000625849 PKHD1L1Q86WI1 4243 aa1.3□□□□□ -2.2
TCF4-250ENST00000625849 ZNF469Q96JG9 3925 aaPredicted RBP1.29□□□□□ -2.2
TCF4-250ENST00000625849 PKD1P98161 4303 aa1.29□□□□□ -2.2
TCF4-250ENST00000625849 MGAM2Q2M2H8 2515 aa1.29□□□□□ -2.2
TCF4-250ENST00000625849 TENM1Q9UKZ4 2725 aa1.27□□□□□ -2.21
TCF4-250ENST00000625849 NSD1Q96L73 2696 aaPredicted RBP1.27□□□□□ -2.21
TCF4-250ENST00000625849 PKHD1P08F94 4074 aa1.26□□□□□ -2.21
TCF4-250ENST00000625849 FAT2Q9NYQ8 4349 aa1.26□□□□□ -2.21
TCF4-250ENST00000625849 FLGP20930 4061 aaPredicted RBP1.26□□□□□ -2.21
TCF4-250ENST00000625849 LRP1Q07954 4544 aaKnown RBP1.25□□□□□ -2.21
TCF4-250ENST00000625849 APOBP04114 4563 aaKnown RBP1.25□□□□□ -2.21
TCF4-250ENST00000625849 DNAH5Q8TE73 4624 aa1.25□□□□□ -2.21
TCF4-250ENST00000625849 VPS13BQ7Z7G8 4022 aa1.25□□□□□ -2.21
TCF4-250ENST00000625849 HSPG2P98160 4391 aa1.25□□□□□ -2.21
TCF4-250ENST00000625849 TNXBP22105 4242 aa1.24□□□□□ -2.21
TCF4-250ENST00000625849 KRTAP8-1Q8IUC2 63 aa1.24□□□□□ -2.21
TCF4-250ENST00000625849 STARD9Q9P2P6 4700 aa1.24□□□□□ -2.21
TCF4-250ENST00000625849 PLECQ15149 4684 aaKnown RBP1.22□□□□□ -2.21
TCF4-250ENST00000625849 DYNC1H1Q14204 4646 aaKnown RBP1.22□□□□□ -2.21
TCF4-250ENST00000625849 KRTAP6-3Q3LI67 103 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms