RNA–Protein interactions for RNA: ENST00000616401.1

SOX2-OT-236, SOX2 overlapping transcript, humanhuman

Gene SOX2-OT, Length 69 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-236ENST00000616401 APELAP0DMC3 54 aa-2.27□□□□□ -2.77
SOX2-OT-236ENST00000616401 FAM24BQ8N5W8 94 aa-2.27□□□□□ -2.77
SOX2-OT-236ENST00000616401 NKIRAS1Q9NYS0 192 aa-2.27□□□□□ -2.77
SOX2-OT-236ENST00000616401 COMMD10Q9Y6G5 202 aa-2.27□□□□□ -2.77
SOX2-OT-236ENST00000616401 TOP2AP11388 1531 aaKnown RBP-2.27□□□□□ -2.77
SOX2-OT-236ENST00000616401 ABCA5Q8WWZ7 1642 aa-2.28□□□□□ -2.77
SOX2-OT-236ENST00000616401 K7EMI3 77 aa-2.28□□□□□ -2.77
SOX2-OT-236ENST00000616401 BCAP31P51572 246 aa-2.28□□□□□ -2.77
SOX2-OT-236ENST00000616401 PEA15Q15121 130 aa-2.28□□□□□ -2.77
SOX2-OT-236ENST00000616401 SMIM20Q8N5G0 67 aa-2.28□□□□□ -2.77
SOX2-OT-236ENST00000616401 SPANXCQ9NY87 97 aa-2.28□□□□□ -2.77
SOX2-OT-236ENST00000616401 PAIP2BQ9ULR5 123 aaKnown RBP-2.28□□□□□ -2.77
SOX2-OT-236ENST00000616401 KTN1Q86UP2 1357 aaKnown RBP-2.28□□□□□ -2.77
SOX2-OT-236ENST00000616401 DUOX1Q9NRD9 1551 aa-2.28□□□□□ -2.77
SOX2-OT-236ENST00000616401 PFDN1O60925 122 aa-2.29□□□□□ -2.78
SOX2-OT-236ENST00000616401 HTN3P15516 51 aa-2.29□□□□□ -2.78
SOX2-OT-236ENST00000616401 TSTD1Q8NFU3 115 aa-2.29□□□□□ -2.78
SOX2-OT-236ENST00000616401 LINC00470Q9BZP3 86 aa-2.29□□□□□ -2.78
SOX2-OT-236ENST00000616401 CCDC167Q9P0B6 97 aa-2.29□□□□□ -2.78
SOX2-OT-236ENST00000616401 A0A087WWC5 75 aa-2.3□□□□□ -2.78
SOX2-OT-236ENST00000616401 MYMXA0A1B0GTQ4 84 aa-2.3□□□□□ -2.78
SOX2-OT-236ENST00000616401 PVALEFA0A1B0GWK0 134 aa-2.3□□□□□ -2.78
SOX2-OT-236ENST00000616401 CETN3O15182 167 aa-2.3□□□□□ -2.78
SOX2-OT-236ENST00000616401 APOC2P02655 101 aa-2.3□□□□□ -2.78
SOX2-OT-236ENST00000616401 PKIAP61925 76 aa-2.3□□□□□ -2.78
SOX2-OT-236ENST00000616401 CATR1Q13166 79 aa-2.3□□□□□ -2.78
SOX2-OT-236ENST00000616401 HSP90AB2PQ58FF8 381 aa-2.3□□□□□ -2.78
SOX2-OT-236ENST00000616401 C9orf16Q9BUW7 83 aa-2.3□□□□□ -2.78
SOX2-OT-236ENST00000616401 IQGAP3Q86VI3 1631 aa-2.31□□□□□ -2.78
SOX2-OT-236ENST00000616401 LINC00694P0DN24 101 aa-2.31□□□□□ -2.78
SOX2-OT-236ENST00000616401 MORN2Q502X0 79 aa-2.31□□□□□ -2.78
SOX2-OT-236ENST00000616401 SPANXA1Q9NS26 97 aa-2.31□□□□□ -2.78
SOX2-OT-236ENST00000616401 CEBPZOSA8MTT3 80 aa-2.32□□□□□ -2.78
SOX2-OT-236ENST00000616401 H3BSH0 61 aa-2.32□□□□□ -2.78
SOX2-OT-236ENST00000616401 S100A1P23297 94 aa-2.32□□□□□ -2.78
SOX2-OT-236ENST00000616401 MEIG1Q5JSS6 88 aa-2.32□□□□□ -2.78
SOX2-OT-236ENST00000616401 ATP5EP2Q5VTU8 51 aa-2.32□□□□□ -2.78
SOX2-OT-236ENST00000616401 TOMM20LQ6UXN7 152 aa-2.32□□□□□ -2.78
SOX2-OT-236ENST00000616401 LZICQ8WZA0 190 aa-2.32□□□□□ -2.78
SOX2-OT-236ENST00000616401 UGGT1Q9NYU2 1555 aa-2.32□□□□□ -2.78
SOX2-OT-236ENST00000616401 KIF27Q86VH2 1401 aa-2.33□□□□□ -2.78
SOX2-OT-236ENST00000616401 A0A1B0GV72 72 aa-2.33□□□□□ -2.78
SOX2-OT-236ENST00000616401 NBEAP1P0C6P0 100 aa-2.33□□□□□ -2.78
SOX2-OT-236ENST00000616401 ATP6V1E1P36543 226 aa-2.33□□□□□ -2.78
SOX2-OT-236ENST00000616401 SMIM11AP58511 58 aa-2.33□□□□□ -2.78
SOX2-OT-236ENST00000616401 S100ZQ8WXG8 99 aa-2.33□□□□□ -2.78
SOX2-OT-236ENST00000616401 COX16Q9P0S2 106 aa-2.33□□□□□ -2.78
SOX2-OT-236ENST00000616401 UQCRHLA0A096LP55 91 aa-2.34□□□□□ -2.78
SOX2-OT-236ENST00000616401 ERICH2A1L162 156 aa-2.34□□□□□ -2.78
SOX2-OT-236ENST00000616401 PDCD5O14737 125 aa-2.34□□□□□ -2.78
SOX2-OT-236ENST00000616401 STMN1P16949 149 aa-2.34□□□□□ -2.78
SOX2-OT-236ENST00000616401 GNG3P63215 75 aa-2.34□□□□□ -2.78
SOX2-OT-236ENST00000616401 TMEM35BQ8NCS4 154 aa-2.34□□□□□ -2.78
SOX2-OT-236ENST00000616401 CCDC42Q96M95 316 aa-2.34□□□□□ -2.78
SOX2-OT-236ENST00000616401 J3QR89 54 aa-2.35□□□□□ -2.79
SOX2-OT-236ENST00000616401 TPM4P67936 248 aa-2.35□□□□□ -2.79
SOX2-OT-236ENST00000616401 SPA17Q15506 151 aa-2.35□□□□□ -2.79
SOX2-OT-236ENST00000616401 ATP6V1DQ9Y5K8 247 aa-2.35□□□□□ -2.79
SOX2-OT-236ENST00000616401 LSM6P62312 80 aaKnown RBP-2.36□□□□□ -2.79
SOX2-OT-236ENST00000616401 PMS2P3Q13401 168 aa-2.36□□□□□ -2.79
SOX2-OT-236ENST00000616401 PYDC1Q8WXC3 89 aa-2.36□□□□□ -2.79
SOX2-OT-236ENST00000616401 ERICH3Q5RHP9 1530 aa-2.37□□□□□ -2.79
SOX2-OT-236ENST00000616401 ABCA10Q8WWZ4 1543 aa-2.37□□□□□ -2.79
SOX2-OT-236ENST00000616401 H0YGX0 51 aa-2.37□□□□□ -2.79
SOX2-OT-236ENST00000616401 CCL7P80098 99 aa-2.37□□□□□ -2.79
SOX2-OT-236ENST00000616401 DR1Q01658 176 aa-2.37□□□□□ -2.79
SOX2-OT-236ENST00000616401 TMEM203Q969S6 136 aa-2.37□□□□□ -2.79
SOX2-OT-236ENST00000616401 Q9Y3F1 56 aa-2.37□□□□□ -2.79
SOX2-OT-236ENST00000616401 K7ERU9 68 aa-2.38□□□□□ -2.79
SOX2-OT-236ENST00000616401 YKT6O15498 198 aa-2.38□□□□□ -2.79
SOX2-OT-236ENST00000616401 NDUFA2O43678 99 aa-2.38□□□□□ -2.79
SOX2-OT-236ENST00000616401 RPP14O95059 124 aaKnown RBP-2.38□□□□□ -2.79
SOX2-OT-236ENST00000616401 SERF2P84101 59 aa-2.38□□□□□ -2.79
SOX2-OT-236ENST00000616401 FAM9CQ8IZT9 166 aa-2.38□□□□□ -2.79
SOX2-OT-236ENST00000616401 PFDN5Q99471 154 aa-2.38□□□□□ -2.79
SOX2-OT-236ENST00000616401 AIF1LQ9BQI0 150 aa-2.38□□□□□ -2.79
SOX2-OT-236ENST00000616401 IGIPA6NJ69 53 aa-2.39□□□□□ -2.79
SOX2-OT-236ENST00000616401 LINC00587B1AMM8 73 aa-2.39□□□□□ -2.79
SOX2-OT-236ENST00000616401 M0R1W7 72 aa-2.39□□□□□ -2.79
SOX2-OT-236ENST00000616401 SMIM13P0DJ93 91 aa-2.39□□□□□ -2.79
SOX2-OT-236ENST00000616401 LINC00643Q86TS7 51 aa-2.39□□□□□ -2.79
SOX2-OT-236ENST00000616401 MROH2BQ7Z745 1585 aa-2.4□□□□□ -2.79
SOX2-OT-236ENST00000616401 A0A087WXM4 84 aa-2.4□□□□□ -2.79
SOX2-OT-236ENST00000616401 NCMAPQ5T1S8 102 aa-2.4□□□□□ -2.79
SOX2-OT-236ENST00000616401 SIKE1Q9BRV8 207 aa-2.4□□□□□ -2.79
SOX2-OT-236ENST00000616401 ABCA6Q8N139 1617 aa-2.4□□□□□ -2.79
SOX2-OT-236ENST00000616401 GNGT2O14610 69 aa-2.41□□□□□ -2.8
SOX2-OT-236ENST00000616401 CSTAP01040 98 aa-2.41□□□□□ -2.8
SOX2-OT-236ENST00000616401 SNRPFP62306 86 aaKnown RBP-2.41□□□□□ -2.8
SOX2-OT-236ENST00000616401 SKA2Q8WVK7 121 aaPredicted RBP-2.41□□□□□ -2.8
SOX2-OT-236ENST00000616401 SMIM3Q9BZL3 60 aa-2.41□□□□□ -2.8
SOX2-OT-236ENST00000616401 UGGT2Q9NYU1 1516 aa-2.42□□□□□ -2.8
SOX2-OT-236ENST00000616401 SAMD9LQ8IVG5 1584 aa-2.43□□□□□ -2.8
SOX2-OT-236ENST00000616401 HMGN1P05114 100 aa-2.43□□□□□ -2.8
SOX2-OT-236ENST00000616401 S100GP29377 79 aa-2.43□□□□□ -2.8
SOX2-OT-236ENST00000616401 FAUP35544 74 aaKnown RBP-2.43□□□□□ -2.8
SOX2-OT-236ENST00000616401 COL5A1-AS1Q5SY13 56 aa-2.43□□□□□ -2.8
SOX2-OT-236ENST00000616401 SVBPQ8N300 66 aa-2.43□□□□□ -2.8
SOX2-OT-236ENST00000616401 COX14Q96I36 57 aa-2.43□□□□□ -2.8
SOX2-OT-236ENST00000616401 TSC22D3Q99576 134 aa-2.43□□□□□ -2.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms