RNA–Protein interactions for RNA: ENST00000616114.4

PCDH15-229, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH15, Length 5,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-229ENST00000616114 DNAH3Q8TD57 4116 aa4.03□□□□□ -1.76
PCDH15-229ENST00000616114 DNAH2Q9P225 4427 aa4.01□□□□□ -1.77
PCDH15-229ENST00000616114 DNAH5Q8TE73 4624 aa4□□□□□ -1.77
PCDH15-229ENST00000616114 COL7A1Q02388 2944 aa4□□□□□ -1.77
PCDH15-229ENST00000616114 KRTAP23-1A1A580 65 aa3.97□□□□□ -1.77
PCDH15-229ENST00000616114 DNAH11Q96DT5 4516 aa3.96□□□□□ -1.78
PCDH15-229ENST00000616114 KRTAP4-5Q9BYR2 181 aa3.95□□□□□ -1.78
PCDH15-229ENST00000616114 DYNC2H1Q8NCM8 4307 aaKnown RBP3.92□□□□□ -1.78
PCDH15-229ENST00000616114 STARD9Q9P2P6 4700 aa3.91□□□□□ -1.78
PCDH15-229ENST00000616114 DNAH8Q96JB1 4490 aa3.9□□□□□ -1.79
PCDH15-229ENST00000616114 ANK2Q01484 3957 aa3.88□□□□□ -1.79
PCDH15-229ENST00000616114 DYNC1H1Q14204 4646 aaKnown RBP3.88□□□□□ -1.79
PCDH15-229ENST00000616114 DNAH6Q9C0G6 4158 aa3.88□□□□□ -1.79
PCDH15-229ENST00000616114 CSMD3Q7Z407 3707 aa3.88□□□□□ -1.79
PCDH15-229ENST00000616114 SACSQ9NZJ4 4579 aa3.87□□□□□ -1.79
PCDH15-229ENST00000616114 LORP23490 312 aaPredicted RBP3.85□□□□□ -1.79
PCDH15-229ENST00000616114 LRP1BQ9NZR2 4599 aa3.84□□□□□ -1.79
PCDH15-229ENST00000616114 CMYA5Q8N3K9 4069 aa3.83□□□□□ -1.8
PCDH15-229ENST00000616114 FAT2Q9NYQ8 4349 aa3.82□□□□□ -1.8
PCDH15-229ENST00000616114 KRTAP10-12P60413 245 aa3.81□□□□□ -1.8
PCDH15-229ENST00000616114 INE1O15225 51 aa3.77□□□□□ -1.81
PCDH15-229ENST00000616114 KRTAP4-1Q9BYQ7 146 aa3.76□□□□□ -1.81
PCDH15-229ENST00000616114 PRKDCP78527 4128 aaKnown RBP3.75□□□□□ -1.81
PCDH15-229ENST00000616114 DNHD1Q96M86 4753 aa3.75□□□□□ -1.81
PCDH15-229ENST00000616114 KRTAP12-3P60328 96 aa3.73□□□□□ -1.81
PCDH15-229ENST00000616114 LCE3AQ5TA76 89 aa3.73□□□□□ -1.81
PCDH15-229ENST00000616114 FAT1Q14517 4588 aa3.72□□□□□ -1.81
PCDH15-229ENST00000616114 KMT2AQ03164 3969 aa3.72□□□□□ -1.81
PCDH15-229ENST00000616114 HECTD4Q9Y4D8 3996 aa3.71□□□□□ -1.82
PCDH15-229ENST00000616114 DNAH7Q8WXX0 4024 aa3.71□□□□□ -1.82
PCDH15-229ENST00000616114 VPS13BQ7Z7G8 4022 aa3.7□□□□□ -1.82
PCDH15-229ENST00000616114 SPRR2GQ9BYE4 73 aa3.67□□□□□ -1.82
PCDH15-229ENST00000616114 APOBP04114 4563 aaKnown RBP3.64□□□□□ -1.83
PCDH15-229ENST00000616114 MT1HP80294 61 aa3.62□□□□□ -1.83
PCDH15-229ENST00000616114 FRAS1Q86XX4 4008 aa3.6□□□□□ -1.83
PCDH15-229ENST00000616114 MT2AP02795 61 aa3.59□□□□□ -1.83
PCDH15-229ENST00000616114 FAT3Q8TDW7 4589 aa3.58□□□□□ -1.84
PCDH15-229ENST00000616114 RYR1P21817 5038 aa3.58□□□□□ -1.84
PCDH15-229ENST00000616114 RYR2Q92736 4967 aa3.57□□□□□ -1.84
PCDH15-229ENST00000616114 LYSTQ99698 3801 aa3.56□□□□□ -1.84
PCDH15-229ENST00000616114 KRTAP17-1Q9BYP8 105 aa3.55□□□□□ -1.84
PCDH15-229ENST00000616114 MT1FP04733 61 aa3.52□□□□□ -1.85
PCDH15-229ENST00000616114 RYR3Q15413 4870 aa3.51□□□□□ -1.85
PCDH15-229ENST00000616114 MYCBP2O75592 4640 aa3.5□□□□□ -1.85
PCDH15-229ENST00000616114 KRTAP8-1Q8IUC2 63 aa3.48□□□□□ -1.85
PCDH15-229ENST00000616114 HSPG2P98160 4391 aa3.48□□□□□ -1.85
PCDH15-229ENST00000616114 KRTAP19-8Q3LI54 63 aa3.46□□□□□ -1.86
PCDH15-229ENST00000616114 PKHD1L1Q86WI1 4243 aa3.44□□□□□ -1.86
PCDH15-229ENST00000616114 PKD1P98161 4303 aa3.44□□□□□ -1.86
PCDH15-229ENST00000616114 HYDINQ4G0P3 5121 aa3.44□□□□□ -1.86
PCDH15-229ENST00000616114 LRP1Q07954 4544 aaKnown RBP3.44□□□□□ -1.86
PCDH15-229ENST00000616114 KRTAP19-4Q3LI73 84 aa3.44□□□□□ -1.86
PCDH15-229ENST00000616114 KRTAP19-1Q8IUB9 90 aa3.44□□□□□ -1.86
PCDH15-229ENST00000616114 KIAA1109Q2LD37 5005 aa3.43□□□□□ -1.86
PCDH15-229ENST00000616114 HERC1Q15751 4861 aa3.38□□□□□ -1.87
PCDH15-229ENST00000616114 CRCT1Q9UGL9 99 aa3.37□□□□□ -1.87
PCDH15-229ENST00000616114 KRTAP19-5Q3LI72 72 aa3.36□□□□□ -1.87
PCDH15-229ENST00000616114 PKHD1P08F94 4074 aa3.36□□□□□ -1.87
PCDH15-229ENST00000616114 LCE3CQ5T5A8 94 aa3.36□□□□□ -1.87
PCDH15-229ENST00000616114 SPRR5A0A1B0GTR4 108 aa3.34□□□□□ -1.88
PCDH15-229ENST00000616114 TNXBP22105 4242 aa3.33□□□□□ -1.88
PCDH15-229ENST00000616114 LCE2CQ5TA81 110 aa3.33□□□□□ -1.88
PCDH15-229ENST00000616114 MT1XP80297 61 aa3.31□□□□□ -1.88
PCDH15-229ENST00000616114 KRTAP9-8Q9BYQ0 159 aa3.31□□□□□ -1.88
PCDH15-229ENST00000616114 KRTAP19-2Q3LHN2 52 aa3.31□□□□□ -1.88
PCDH15-229ENST00000616114 MT1BP07438 61 aa3.3□□□□□ -1.88
PCDH15-229ENST00000616114 KRTAP10-5P60370 271 aa3.29□□□□□ -1.88
PCDH15-229ENST00000616114 KRTAP10-7P60409 375 aaPredicted RBP3.29□□□□□ -1.88
PCDH15-229ENST00000616114 LRP2P98164 4655 aa3.27□□□□□ -1.89
PCDH15-229ENST00000616114 BIRC6Q9NR09 4857 aa3.25□□□□□ -1.89
PCDH15-229ENST00000616114 HERC2O95714 4834 aa3.25□□□□□ -1.89
PCDH15-229ENST00000616114 KRTAP9-3Q9BYQ3 159 aa3.23□□□□□ -1.89
PCDH15-229ENST00000616114 MUC17Q685J3 4493 aa3.2□□□□□ -1.9
PCDH15-229ENST00000616114 KMT2CQ8NEZ4 4911 aaKnown RBP3.2□□□□□ -1.9
PCDH15-229ENST00000616114 FLGP20930 4061 aaPredicted RBP3.16□□□□□ -1.9
PCDH15-229ENST00000616114 LPAP08519 4548 aa3.16□□□□□ -1.9
PCDH15-229ENST00000616114 SPRR2FQ96RM1 72 aa3.12□□□□□ -1.91
PCDH15-229ENST00000616114 KRTAP4-8A0A0G2JLE6 195 aa3.04□□□□□ -1.92
PCDH15-229ENST00000616114 KRTAP4-8Q9BYQ9 185 aa3.04□□□□□ -1.92
PCDH15-229ENST00000616114 PCLOQ9Y6V0 5065 aa3.04□□□□□ -1.92
PCDH15-229ENST00000616114 MT1GP13640 62 aa3.04□□□□□ -1.92
PCDH15-229ENST00000616114 LCE2BO14633 110 aa3.03□□□□□ -1.92
PCDH15-229ENST00000616114 ABCA13Q86UQ4 5058 aa3.01□□□□□ -1.93
PCDH15-229ENST00000616114 EPPK1P58107 5090 aaKnown RBP2.99□□□□□ -1.93
PCDH15-229ENST00000616114 MT1LQ93083 61 aa2.98□□□□□ -1.93
PCDH15-229ENST00000616114 MT1EP04732 61 aa2.96□□□□□ -1.94
PCDH15-229ENST00000616114 SPRR2EP22531 72 aa2.96□□□□□ -1.94
PCDH15-229ENST00000616114 SPRR2BP35325 72 aa2.96□□□□□ -1.94
PCDH15-229ENST00000616114 SPRR2AP35326 72 aa2.96□□□□□ -1.94
PCDH15-229ENST00000616114 KRTAP19-3Q7Z4W3 81 aa2.93□□□□□ -1.94
PCDH15-229ENST00000616114 KRTAP12-4P60329 112 aa2.91□□□□□ -1.94
PCDH15-229ENST00000616114 KRTAP19-6Q3LI70 58 aa2.9□□□□□ -1.95
PCDH15-229ENST00000616114 LCE3BQ5TA77 95 aa2.9□□□□□ -1.95
PCDH15-229ENST00000616114 SPRR2DP22532 72 aa2.89□□□□□ -1.95
PCDH15-229ENST00000616114 LCE2AQ5TA79 106 aaPredicted RBP2.87□□□□□ -1.95
PCDH15-229ENST00000616114 KRTAP4-7Q9BYR0 210 aa2.87□□□□□ -1.95
PCDH15-229ENST00000616114 FAT4Q6V0I7 4981 aa2.86□□□□□ -1.95
PCDH15-229ENST00000616114 RNF213Q63HN8 5207 aa2.85□□□□□ -1.95
PCDH15-229ENST00000616114 HMCN2Q8NDA2 5059 aa2.84□□□□□ -1.95
PCDH15-229ENST00000616114 KRTAP19-7Q3SYF9 63 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms