RNA–Protein interactions for RNA: ENST00000615285.4

NCAM1-222, Transcript of neural cell adhesion molecule 1, human

TSL 5 BASIC

Gene NCAM1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAM1-222	ENST00000615285	VPS13C	Q709C8	3753 aa		4.19	□□□□□ -1.74
NCAM1-222	ENST00000615285	CSMD3	Q7Z407	3707 aa		4.18	□□□□□ -1.74
NCAM1-222	ENST00000615285	CRCT1	Q9UGL9	99 aa		4.18	□□□□□ -1.74
NCAM1-222	ENST00000615285	COL7A1	Q02388	2944 aa		4.17	□□□□□ -1.74
NCAM1-222	ENST00000615285	DNAH2	Q9P225	4427 aa		4.16	□□□□□ -1.74
NCAM1-222	ENST00000615285	VPS13D	Q5THJ4	4388 aa		4.12	□□□□□ -1.75
NCAM1-222	ENST00000615285	DNAH5	Q8TE73	4624 aa		4.12	□□□□□ -1.75
NCAM1-222	ENST00000615285	MT1H	P80294	61 aa		4.1	□□□□□ -1.75
NCAM1-222	ENST00000615285	DNAH17	Q9UFH2	4485 aa		4.08	□□□□□ -1.76
NCAM1-222	ENST00000615285	PLEC	Q15149	4684 aa	Known RBP	4.07	□□□□□ -1.76
NCAM1-222	ENST00000615285	KRTAP12-3	P60328	96 aa		4.06	□□□□□ -1.76
NCAM1-222	ENST00000615285	DNAH6	Q9C0G6	4158 aa		4.06	□□□□□ -1.76
NCAM1-222	ENST00000615285	DYNC1H1	Q14204	4646 aa	Known RBP	4.04	□□□□□ -1.76
NCAM1-222	ENST00000615285	KRTAP8-1	Q8IUC2	63 aa		4.03	□□□□□ -1.76
NCAM1-222	ENST00000615285	KRTAP4-1	Q9BYQ7	146 aa		4.02	□□□□□ -1.77
NCAM1-222	ENST00000615285	DYNC2H1	Q8NCM8	4307 aa	Known RBP	4.01	□□□□□ -1.77
NCAM1-222	ENST00000615285	DNAH3	Q8TD57	4116 aa		4.01	□□□□□ -1.77
NCAM1-222	ENST00000615285	ANK2	Q01484	3957 aa		4.01	□□□□□ -1.77
NCAM1-222	ENST00000615285	FAT2	Q9NYQ8	4349 aa		3.99	□□□□□ -1.77
NCAM1-222	ENST00000615285	MT2A	P02795	61 aa		3.98	□□□□□ -1.77
NCAM1-222	ENST00000615285	SPRR2G	Q9BYE4	73 aa		3.98	□□□□□ -1.77
NCAM1-222	ENST00000615285	LOR	P23490	312 aa	Predicted RBP	3.98	□□□□□ -1.77
NCAM1-222	ENST00000615285	LCE3A	Q5TA76	89 aa		3.97	□□□□□ -1.77
NCAM1-222	ENST00000615285	DNHD1	Q96M86	4753 aa		3.93	□□□□□ -1.78
NCAM1-222	ENST00000615285	ZNF469	Q96JG9	3925 aa	Predicted RBP	3.92	□□□□□ -1.78
NCAM1-222	ENST00000615285	LRP1B	Q9NZR2	4599 aa		3.91	□□□□□ -1.78
NCAM1-222	ENST00000615285	DNAH8	Q96JB1	4490 aa		3.9	□□□□□ -1.79
NCAM1-222	ENST00000615285	SACS	Q9NZJ4	4579 aa		3.89	□□□□□ -1.79
NCAM1-222	ENST00000615285	STARD9	Q9P2P6	4700 aa		3.88	□□□□□ -1.79
NCAM1-222	ENST00000615285	KRTAP19-4	Q3LI73	84 aa		3.88	□□□□□ -1.79
NCAM1-222	ENST00000615285	MT1F	P04733	61 aa		3.86	□□□□□ -1.79
NCAM1-222	ENST00000615285	HERC1	Q15751	4861 aa		3.8	□□□□□ -1.8
NCAM1-222	ENST00000615285	DNAH7	Q8WXX0	4024 aa		3.79	□□□□□ -1.8
NCAM1-222	ENST00000615285	PRKDC	P78527	4128 aa	Known RBP	3.79	□□□□□ -1.8
NCAM1-222	ENST00000615285	KRTAP10-5	P60370	271 aa		3.79	□□□□□ -1.8
NCAM1-222	ENST00000615285	KRTAP19-8	Q3LI54	63 aa		3.76	□□□□□ -1.81
NCAM1-222	ENST00000615285	RYR2	Q92736	4967 aa		3.75	□□□□□ -1.81
NCAM1-222	ENST00000615285	RYR1	P21817	5038 aa		3.75	□□□□□ -1.81
NCAM1-222	ENST00000615285	HSPG2	P98160	4391 aa		3.75	□□□□□ -1.81
NCAM1-222	ENST00000615285	CMYA5	Q8N3K9	4069 aa		3.73	□□□□□ -1.81
NCAM1-222	ENST00000615285	RYR3	Q15413	4870 aa		3.73	□□□□□ -1.81
NCAM1-222	ENST00000615285	SPRR2F	Q96RM1	72 aa		3.73	□□□□□ -1.81
NCAM1-222	ENST00000615285	KRTAP17-1	Q9BYP8	105 aa		3.71	□□□□□ -1.81
NCAM1-222	ENST00000615285	KRTAP10-7	P60409	375 aa	Predicted RBP	3.71	□□□□□ -1.82
NCAM1-222	ENST00000615285	BIRC6	Q9NR09	4857 aa		3.7	□□□□□ -1.82
NCAM1-222	ENST00000615285	FAT1	Q14517	4588 aa		3.7	□□□□□ -1.82
NCAM1-222	ENST00000615285	FAT3	Q8TDW7	4589 aa		3.69	□□□□□ -1.82
NCAM1-222	ENST00000615285	APOB	P04114	4563 aa	Known RBP	3.68	□□□□□ -1.82
NCAM1-222	ENST00000615285	KRTAP19-5	Q3LI72	72 aa		3.64	□□□□□ -1.83
NCAM1-222	ENST00000615285	KMT2A	Q03164	3969 aa		3.63	□□□□□ -1.83
NCAM1-222	ENST00000615285	VPS13B	Q7Z7G8	4022 aa		3.62	□□□□□ -1.83
NCAM1-222	ENST00000615285	KRTAP19-1	Q8IUB9	90 aa		3.62	□□□□□ -1.83
NCAM1-222	ENST00000615285	PKHD1L1	Q86WI1	4243 aa		3.61	□□□□□ -1.83
NCAM1-222	ENST00000615285	MYCBP2	O75592	4640 aa		3.61	□□□□□ -1.83
NCAM1-222	ENST00000615285	KRTAP9-8	Q9BYQ0	159 aa		3.6	□□□□□ -1.83
NCAM1-222	ENST00000615285	SPRR2E	P22531	72 aa		3.58	□□□□□ -1.84
NCAM1-222	ENST00000615285	SPRR2B	P35325	72 aa		3.58	□□□□□ -1.84
NCAM1-222	ENST00000615285	SPRR2A	P35326	72 aa		3.58	□□□□□ -1.84
NCAM1-222	ENST00000615285	LCE3C	Q5T5A8	94 aa		3.58	□□□□□ -1.84
NCAM1-222	ENST00000615285	LRP1	Q07954	4544 aa	Known RBP	3.57	□□□□□ -1.84
NCAM1-222	ENST00000615285	FRAS1	Q86XX4	4008 aa		3.57	□□□□□ -1.84
NCAM1-222	ENST00000615285	LCE2C	Q5TA81	110 aa		3.56	□□□□□ -1.84
NCAM1-222	ENST00000615285	KRTAP9-3	Q9BYQ3	159 aa		3.54	□□□□□ -1.84
NCAM1-222	ENST00000615285	MT1B	P07438	61 aa		3.53	□□□□□ -1.84
NCAM1-222	ENST00000615285	KIAA1109	Q2LD37	5005 aa		3.53	□□□□□ -1.84
NCAM1-222	ENST00000615285	MT1X	P80297	61 aa		3.52	□□□□□ -1.85
NCAM1-222	ENST00000615285	HECTD4	Q9Y4D8	3996 aa		3.51	□□□□□ -1.85
NCAM1-222	ENST00000615285	SPRR2D	P22532	72 aa		3.49	□□□□□ -1.85
NCAM1-222	ENST00000615285	LYST	Q99698	3801 aa		3.48	□□□□□ -1.85
NCAM1-222	ENST00000615285	LCE2B	O14633	110 aa		3.47	□□□□□ -1.85
NCAM1-222	ENST00000615285	HERC2	O95714	4834 aa		3.46	□□□□□ -1.86
NCAM1-222	ENST00000615285	PKD1	P98161	4303 aa		3.44	□□□□□ -1.86
NCAM1-222	ENST00000615285	MT1G	P13640	62 aa		3.44	□□□□□ -1.86
NCAM1-222	ENST00000615285	LCE2D	Q5TA82	110 aa	Predicted RBP	3.42	□□□□□ -1.86
NCAM1-222	ENST00000615285	MUC17	Q685J3	4493 aa		3.4	□□□□□ -1.86
NCAM1-222	ENST00000615285	PCLO	Q9Y6V0	5065 aa		3.4	□□□□□ -1.86
NCAM1-222	ENST00000615285	KRTAP19-2	Q3LHN2	52 aa		3.4	□□□□□ -1.87
NCAM1-222	ENST00000615285	KRTAP12-4	P60329	112 aa		3.37	□□□□□ -1.87
NCAM1-222	ENST00000615285	PKHD1	P08F94	4074 aa		3.37	□□□□□ -1.87
NCAM1-222	ENST00000615285	KRTAP19-6	Q3LI70	58 aa		3.35	□□□□□ -1.87
NCAM1-222	ENST00000615285	HYDIN	Q4G0P3	5121 aa		3.35	□□□□□ -1.87
NCAM1-222	ENST00000615285	KRTAP9-2	Q9BYQ4	174 aa		3.34	□□□□□ -1.88
NCAM1-222	ENST00000615285	LCE3B	Q5TA77	95 aa		3.31	□□□□□ -1.88
NCAM1-222	ENST00000615285	KRTAP19-3	Q7Z4W3	81 aa		3.29	□□□□□ -1.88
NCAM1-222	ENST00000615285	TNXB	P22105	4242 aa		3.29	□□□□□ -1.88
NCAM1-222	ENST00000615285	LCE2A	Q5TA79	106 aa	Predicted RBP	3.29	□□□□□ -1.88
NCAM1-222	ENST00000615285	KRTAP4-8	A0A0G2JLE6	195 aa		3.25	□□□□□ -1.89
NCAM1-222	ENST00000615285	KRTAP4-8	Q9BYQ9	185 aa		3.25	□□□□□ -1.89
NCAM1-222	ENST00000615285	KRTAP9-6	A0A140TA67	174 aa		3.24	□□□□□ -1.89
NCAM1-222	ENST00000615285	MT1E	P04732	61 aa		3.21	□□□□□ -1.9
NCAM1-222	ENST00000615285	MT1L	Q93083	61 aa		3.21	□□□□□ -1.9
NCAM1-222	ENST00000615285	KMT2C	Q8NEZ4	4911 aa	Known RBP	3.2	□□□□□ -1.9
NCAM1-222	ENST00000615285	FLG	P20930	4061 aa	Predicted RBP	3.2	□□□□□ -1.9
NCAM1-222	ENST00000615285	LPA	P08519	4548 aa		3.19	□□□□□ -1.9
NCAM1-222	ENST00000615285	LRP2	P98164	4655 aa		3.18	□□□□□ -1.9
NCAM1-222	ENST00000615285	SPRR5	A0A1B0GTR4	108 aa		3.15	□□□□□ -1.9
NCAM1-222	ENST00000615285	ABCA13	Q86UQ4	5058 aa		3.13	□□□□□ -1.91
NCAM1-222	ENST00000615285	KRTAP4-7	Q9BYR0	210 aa		3.12	□□□□□ -1.91
NCAM1-222	ENST00000615285	MT1M	Q8N339	61 aa		3.11	□□□□□ -1.91
NCAM1-222	ENST00000615285	LCE3D	Q9BYE3	92 aa		3.09	□□□□□ -1.92

Retrieved 100 of 20,778 RNA–protein pairs in 96 ms