RNA–Protein interactions for RNA: ENST00000613575.4

CDKAL1-204, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKAL1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-204ENST00000613575 LINC00304Q8N9R0 145 aa3.9□□□□□ -1.79
CDKAL1-204ENST00000613575 CSMD3Q7Z407 3707 aa3.89□□□□□ -1.79
CDKAL1-204ENST00000613575 LYSTQ99698 3801 aa3.88□□□□□ -1.79
CDKAL1-204ENST00000613575 IGKV2D-30A0A075B6S6 120 aa3.88□□□□□ -1.79
CDKAL1-204ENST00000613575 DNAH7Q8WXX0 4024 aa3.88□□□□□ -1.79
CDKAL1-204ENST00000613575 ALMS1Q8TCU4 4167 aa3.88□□□□□ -1.79
CDKAL1-204ENST00000613575 Q96NJ1 140 aa3.87□□□□□ -1.79
CDKAL1-204ENST00000613575 PSORS1C2Q9UIG4 136 aa3.87□□□□□ -1.79
CDKAL1-204ENST00000613575 SSBP3-AS1Q7Z2R9 100 aa3.86□□□□□ -1.79
CDKAL1-204ENST00000613575 CIRBP-AS1Q8TBR5 109 aa3.86□□□□□ -1.79
CDKAL1-204ENST00000613575 DNAH17Q9UFH2 4485 aa3.86□□□□□ -1.79
CDKAL1-204ENST00000613575 STARD9Q9P2P6 4700 aa3.85□□□□□ -1.79
CDKAL1-204ENST00000613575 KRTAP5-11Q6L8G4 156 aa3.84□□□□□ -1.79
CDKAL1-204ENST00000613575 CAMK2N1Q7Z7J9 78 aa3.84□□□□□ -1.79
CDKAL1-204ENST00000613575 DNAH2Q9P225 4427 aa3.84□□□□□ -1.79
CDKAL1-204ENST00000613575 LY6G6CO95867 125 aa3.83□□□□□ -1.8
CDKAL1-204ENST00000613575 A0A1B0GVX0 72 aa3.82□□□□□ -1.8
CDKAL1-204ENST00000613575 MRPL34Q9BQ48 92 aaKnown RBP3.81□□□□□ -1.8
CDKAL1-204ENST00000613575 DNAH8Q96JB1 4490 aa3.81□□□□□ -1.8
CDKAL1-204ENST00000613575 ANAPC11Q9NYG5 84 aa3.81□□□□□ -1.8
CDKAL1-204ENST00000613575 SRRM2Q9UQ35 2752 aaKnown RBP3.81□□□□□ -1.8
CDKAL1-204ENST00000613575 KMT2AQ03164 3969 aa3.8□□□□□ -1.8
CDKAL1-204ENST00000613575 HECTD4Q9Y4D8 3996 aa3.8□□□□□ -1.8
CDKAL1-204ENST00000613575 Q6ZSA8 131 aa3.79□□□□□ -1.8
CDKAL1-204ENST00000613575 DNAH6Q9C0G6 4158 aa3.78□□□□□ -1.8
CDKAL1-204ENST00000613575 MUC2Q02817 5179 aa3.78□□□□□ -1.8
CDKAL1-204ENST00000613575 LCE1AQ5T7P2 110 aa3.77□□□□□ -1.81
CDKAL1-204ENST00000613575 DNAH11Q96DT5 4516 aa3.75□□□□□ -1.81
CDKAL1-204ENST00000613575 H0YAA0 97 aa3.74□□□□□ -1.81
CDKAL1-204ENST00000613575 KRTAP10-1P60331 282 aa3.74□□□□□ -1.81
CDKAL1-204ENST00000613575 DNAH5Q8TE73 4624 aa3.74□□□□□ -1.81
CDKAL1-204ENST00000613575 KRTAP13-3Q3SY46 172 aa3.73□□□□□ -1.81
CDKAL1-204ENST00000613575 CRIPTQ9P021 101 aa3.73□□□□□ -1.81
CDKAL1-204ENST00000613575 KRTAP10-7P60409 375 aaPredicted RBP3.71□□□□□ -1.81
CDKAL1-204ENST00000613575 KRTAP13-2Q52LG2 175 aa3.71□□□□□ -1.81
CDKAL1-204ENST00000613575 FRAS1Q86XX4 4008 aa3.71□□□□□ -1.81
CDKAL1-204ENST00000613575 LRP1BQ9NZR2 4599 aa3.71□□□□□ -1.82
CDKAL1-204ENST00000613575 KRTAP1-4P0C5Y4 121 aa3.71□□□□□ -1.82
CDKAL1-204ENST00000613575 A0A1B0GU33 70 aa3.69□□□□□ -1.82
CDKAL1-204ENST00000613575 FAT2Q9NYQ8 4349 aa3.69□□□□□ -1.82
CDKAL1-204ENST00000613575 SPINK6Q6UWN8 80 aa3.68□□□□□ -1.82
CDKAL1-204ENST00000613575 TPRXLQ17RH7 258 aa3.67□□□□□ -1.82
CDKAL1-204ENST00000613575 H1FX-AS1Q4G0G2 97 aa3.67□□□□□ -1.82
CDKAL1-204ENST00000613575 PKD1P98161 4303 aa3.66□□□□□ -1.82
CDKAL1-204ENST00000613575 SPINK1P00995 79 aa3.65□□□□□ -1.82
CDKAL1-204ENST00000613575 RPS29P62273 56 aaKnown RBP3.65□□□□□ -1.82
CDKAL1-204ENST00000613575 COX6B2Q6YFQ2 88 aa3.62□□□□□ -1.83
CDKAL1-204ENST00000613575 TYMSOSQ8TAI1 123 aa3.62□□□□□ -1.83
CDKAL1-204ENST00000613575 VPS13BQ7Z7G8 4022 aa3.61□□□□□ -1.83
CDKAL1-204ENST00000613575 FAT4Q6V0I7 4981 aa3.61□□□□□ -1.83
CDKAL1-204ENST00000613575 A0A1B0GVY2 172 aa3.6□□□□□ -1.83
CDKAL1-204ENST00000613575 DMBT1Q9UGM3 2413 aaPredicted RBP3.59□□□□□ -1.84
CDKAL1-204ENST00000613575 KRTAP10-4P60372 401 aaPredicted RBP3.59□□□□□ -1.84
CDKAL1-204ENST00000613575 RNF213Q63HN8 5207 aa3.58□□□□□ -1.84
CDKAL1-204ENST00000613575 RPL37P61927 97 aaKnown RBP3.58□□□□□ -1.84
CDKAL1-204ENST00000613575 HMCN2Q8NDA2 5059 aa3.57□□□□□ -1.84
CDKAL1-204ENST00000613575 DYNC1H1Q14204 4646 aaKnown RBP3.56□□□□□ -1.84
CDKAL1-204ENST00000613575 FLG2Q5D862 2391 aaPredicted RBP3.54□□□□□ -1.84
CDKAL1-204ENST00000613575 C10orf95Q9H7T3 257 aa3.53□□□□□ -1.84
CDKAL1-204ENST00000613575 KRTAP10-6P60371 365 aaPredicted RBP3.52□□□□□ -1.85
CDKAL1-204ENST00000613575 PLAC4Q8WY50 150 aa3.52□□□□□ -1.85
CDKAL1-204ENST00000613575 PRO2289Q9P1D8 64 aa3.52□□□□□ -1.85
CDKAL1-204ENST00000613575 PKHD1L1Q86WI1 4243 aa3.52□□□□□ -1.85
CDKAL1-204ENST00000613575 SMR3BP02814 79 aaPredicted RBP3.52□□□□□ -1.85
CDKAL1-204ENST00000613575 APOBP04114 4563 aaKnown RBP3.5□□□□□ -1.85
CDKAL1-204ENST00000613575 FAT1Q14517 4588 aa3.5□□□□□ -1.85
CDKAL1-204ENST00000613575 HSPG2P98160 4391 aa3.5□□□□□ -1.85
CDKAL1-204ENST00000613575 PKHD1P08F94 4074 aa3.49□□□□□ -1.85
CDKAL1-204ENST00000613575 MT3P25713 68 aa3.49□□□□□ -1.85
CDKAL1-204ENST00000613575 KRTAP5-1Q6L8H4 278 aa3.48□□□□□ -1.85
CDKAL1-204ENST00000613575 KRTAP2-2Q9BYT5 123 aa3.48□□□□□ -1.85
CDKAL1-204ENST00000613575 MYCBP2O75592 4640 aa3.47□□□□□ -1.85
CDKAL1-204ENST00000613575 KRTAP5-9P26371 169 aa3.47□□□□□ -1.85
CDKAL1-204ENST00000613575 KRTAP10-8P60410 259 aa3.47□□□□□ -1.85
CDKAL1-204ENST00000613575 CRCT1Q9UGL9 99 aa3.47□□□□□ -1.85
CDKAL1-204ENST00000613575 C9orf92A6NGG3 77 aa3.43□□□□□ -1.86
CDKAL1-204ENST00000613575 KRTAP5-4Q6L8H1 288 aa3.43□□□□□ -1.86
CDKAL1-204ENST00000613575 KRTAP4-4Q9BYR3 166 aa3.39□□□□□ -1.87
CDKAL1-204ENST00000613575 R4GN34 69 aa3.39□□□□□ -1.87
CDKAL1-204ENST00000613575 FAT3Q8TDW7 4589 aa3.39□□□□□ -1.87
CDKAL1-204ENST00000613575 TNXBP22105 4242 aa3.38□□□□□ -1.87
CDKAL1-204ENST00000613575 LCE1EQ5T753 118 aa3.38□□□□□ -1.87
CDKAL1-204ENST00000613575 S4R3F8 94 aa3.38□□□□□ -1.87
CDKAL1-204ENST00000613575 FSIP2Q5CZC0 6907 aa3.38□□□□□ -1.87
CDKAL1-204ENST00000613575 INE1O15225 51 aa3.36□□□□□ -1.87
CDKAL1-204ENST00000613575 Q5VSD8 79 aa3.36□□□□□ -1.87
CDKAL1-204ENST00000613575 A0A0D9SG42 100 aa3.34□□□□□ -1.87
CDKAL1-204ENST00000613575 LRP1Q07954 4544 aaKnown RBP3.34□□□□□ -1.88
CDKAL1-204ENST00000613575 MT1HL1P0DM35 61 aa3.33□□□□□ -1.88
CDKAL1-204ENST00000613575 KRTAP13-4Q3LI77 160 aa3.27□□□□□ -1.89
CDKAL1-204ENST00000613575 KRTAP12-2P59991 146 aa3.24□□□□□ -1.89
CDKAL1-204ENST00000613575 LRP2P98164 4655 aa3.24□□□□□ -1.89
CDKAL1-204ENST00000613575 PP632Q6XCG6 107 aa3.23□□□□□ -1.89
CDKAL1-204ENST00000613575 KRTAP12-1P59990 96 aa3.22□□□□□ -1.89
CDKAL1-204ENST00000613575 SSPOA2VEC9 5147 aa3.17□□□□□ -1.9
CDKAL1-204ENST00000613575 M0QZ58 72 aa3.14□□□□□ -1.91
CDKAL1-204ENST00000613575 SPRR5A0A1B0GTR4 108 aa3.13□□□□□ -1.91
CDKAL1-204ENST00000613575 LCE1FQ5T754 118 aa3.13□□□□□ -1.91
CDKAL1-204ENST00000613575 GPR98Q8WXG9 6306 aa3.13□□□□□ -1.91
CDKAL1-204ENST00000613575 LPAP08519 4548 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms