RNA–Protein interactions for RNA: ENST00000613258.4

NUP153-203, Transcript of nucleoporin 153, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NUP153, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP153-203ENST00000613258 DNAH10Q8IVF4 4471 aa6.32□□□□□ -1.4
NUP153-203ENST00000613258 VPS13DQ5THJ4 4388 aa6.32□□□□□ -1.4
NUP153-203ENST00000613258 KRTAP3-2Q9BYR7 98 aa6.32□□□□□ -1.4
NUP153-203ENST00000613258 DNAH3Q8TD57 4116 aa6.28□□□□□ -1.4
NUP153-203ENST00000613258 DNAH17Q9UFH2 4485 aa6.27□□□□□ -1.41
NUP153-203ENST00000613258 DNHD1Q96M86 4753 aa6.26□□□□□ -1.41
NUP153-203ENST00000613258 STARD9Q9P2P6 4700 aa6.25□□□□□ -1.41
NUP153-203ENST00000613258 ANK2Q01484 3957 aa6.25□□□□□ -1.41
NUP153-203ENST00000613258 DNAH11Q96DT5 4516 aa6.24□□□□□ -1.41
NUP153-203ENST00000613258 CMYA5Q8N3K9 4069 aa6.2□□□□□ -1.42
NUP153-203ENST00000613258 DNAH2Q9P225 4427 aa6.19□□□□□ -1.42
NUP153-203ENST00000613258 KRTAP10-12P60413 245 aa6.18□□□□□ -1.42
NUP153-203ENST00000613258 PRKDCP78527 4128 aaKnown RBP6.16□□□□□ -1.42
NUP153-203ENST00000613258 LORP23490 312 aaPredicted RBP6.16□□□□□ -1.42
NUP153-203ENST00000613258 LRP1BQ9NZR2 4599 aa6.15□□□□□ -1.43
NUP153-203ENST00000613258 FAT2Q9NYQ8 4349 aa6.14□□□□□ -1.43
NUP153-203ENST00000613258 DYNC1H1Q14204 4646 aaKnown RBP6.14□□□□□ -1.43
NUP153-203ENST00000613258 CRCT1Q9UGL9 99 aa6.11□□□□□ -1.43
NUP153-203ENST00000613258 KRTAP4-1Q9BYQ7 146 aa6.11□□□□□ -1.43
NUP153-203ENST00000613258 DYNC2H1Q8NCM8 4307 aaKnown RBP6.1□□□□□ -1.43
NUP153-203ENST00000613258 KMT2AQ03164 3969 aa6.1□□□□□ -1.43
NUP153-203ENST00000613258 INE1O15225 51 aa6□□□□□ -1.45
NUP153-203ENST00000613258 FAT1Q14517 4588 aa6□□□□□ -1.45
NUP153-203ENST00000613258 MT1HP80294 61 aa5.99□□□□□ -1.45
NUP153-203ENST00000613258 SACSQ9NZJ4 4579 aa5.99□□□□□ -1.45
NUP153-203ENST00000613258 LCE3AQ5TA76 89 aa5.98□□□□□ -1.45
NUP153-203ENST00000613258 DNAH6Q9C0G6 4158 aa5.97□□□□□ -1.45
NUP153-203ENST00000613258 DNAH8Q96JB1 4490 aa5.95□□□□□ -1.46
NUP153-203ENST00000613258 KRTAP12-3P60328 96 aa5.94□□□□□ -1.46
NUP153-203ENST00000613258 VPS13BQ7Z7G8 4022 aa5.9□□□□□ -1.46
NUP153-203ENST00000613258 RYR1P21817 5038 aa5.88□□□□□ -1.47
NUP153-203ENST00000613258 DNAH7Q8WXX0 4024 aa5.88□□□□□ -1.47
NUP153-203ENST00000613258 FRAS1Q86XX4 4008 aa5.87□□□□□ -1.47
NUP153-203ENST00000613258 LYSTQ99698 3801 aa5.85□□□□□ -1.47
NUP153-203ENST00000613258 KRTAP17-1Q9BYP8 105 aa5.84□□□□□ -1.47
NUP153-203ENST00000613258 KRTAP8-1Q8IUC2 63 aa5.83□□□□□ -1.48
NUP153-203ENST00000613258 MT2AP02795 61 aa5.82□□□□□ -1.48
NUP153-203ENST00000613258 KRTAP23-1A1A580 65 aa5.8□□□□□ -1.48
NUP153-203ENST00000613258 APOBP04114 4563 aaKnown RBP5.76□□□□□ -1.49
NUP153-203ENST00000613258 HECTD4Q9Y4D8 3996 aa5.75□□□□□ -1.49
NUP153-203ENST00000613258 RYR3Q15413 4870 aa5.74□□□□□ -1.49
NUP153-203ENST00000613258 MT1FP04733 61 aa5.73□□□□□ -1.49
NUP153-203ENST00000613258 SPRR2GQ9BYE4 73 aa5.65□□□□□ -1.5
NUP153-203ENST00000613258 HYDINQ4G0P3 5121 aa5.6□□□□□ -1.51
NUP153-203ENST00000613258 RYR2Q92736 4967 aa5.6□□□□□ -1.51
NUP153-203ENST00000613258 FAT3Q8TDW7 4589 aa5.59□□□□□ -1.52
NUP153-203ENST00000613258 HSPG2P98160 4391 aa5.58□□□□□ -1.52
NUP153-203ENST00000613258 LRP1Q07954 4544 aaKnown RBP5.54□□□□□ -1.52
NUP153-203ENST00000613258 KIAA1109Q2LD37 5005 aa5.5□□□□□ -1.53
NUP153-203ENST00000613258 SPRR2FQ96RM1 72 aa5.5□□□□□ -1.53
NUP153-203ENST00000613258 KRTAP10-5P60370 271 aa5.47□□□□□ -1.53
NUP153-203ENST00000613258 MYCBP2O75592 4640 aa5.47□□□□□ -1.53
NUP153-203ENST00000613258 KRTAP19-5Q3LI72 72 aa5.45□□□□□ -1.54
NUP153-203ENST00000613258 PKHD1P08F94 4074 aa5.43□□□□□ -1.54
NUP153-203ENST00000613258 PKD1P98161 4303 aa5.4□□□□□ -1.55
NUP153-203ENST00000613258 BIRC6Q9NR09 4857 aa5.38□□□□□ -1.55
NUP153-203ENST00000613258 LPAP08519 4548 aa5.35□□□□□ -1.55
NUP153-203ENST00000613258 PKHD1L1Q86WI1 4243 aa5.35□□□□□ -1.55
NUP153-203ENST00000613258 KRTAP10-7P60409 375 aaPredicted RBP5.32□□□□□ -1.56
NUP153-203ENST00000613258 KRTAP19-1Q8IUB9 90 aa5.31□□□□□ -1.56
NUP153-203ENST00000613258 HERC2O95714 4834 aa5.31□□□□□ -1.56
NUP153-203ENST00000613258 TNXBP22105 4242 aa5.27□□□□□ -1.57
NUP153-203ENST00000613258 KRTAP19-8Q3LI54 63 aa5.27□□□□□ -1.57
NUP153-203ENST00000613258 KRTAP9-8Q9BYQ0 159 aa5.25□□□□□ -1.57
NUP153-203ENST00000613258 LCE3CQ5T5A8 94 aa5.24□□□□□ -1.57
NUP153-203ENST00000613258 HERC1Q15751 4861 aa5.23□□□□□ -1.57
NUP153-203ENST00000613258 LCE2CQ5TA81 110 aa5.23□□□□□ -1.57
NUP153-203ENST00000613258 SPRR2EP22531 72 aa5.22□□□□□ -1.57
NUP153-203ENST00000613258 SPRR2BP35325 72 aa5.22□□□□□ -1.57
NUP153-203ENST00000613258 SPRR2AP35326 72 aa5.22□□□□□ -1.57
NUP153-203ENST00000613258 MT1XP80297 61 aa5.2□□□□□ -1.58
NUP153-203ENST00000613258 MT1BP07438 61 aa5.18□□□□□ -1.58
NUP153-203ENST00000613258 LRP2P98164 4655 aa5.17□□□□□ -1.58
NUP153-203ENST00000613258 KRTAP9-3Q9BYQ3 159 aa5.13□□□□□ -1.59
NUP153-203ENST00000613258 KMT2CQ8NEZ4 4911 aaKnown RBP5.11□□□□□ -1.59
NUP153-203ENST00000613258 KRTAP4-8A0A0G2JLE6 195 aa5.07□□□□□ -1.6
NUP153-203ENST00000613258 KRTAP4-8Q9BYQ9 185 aa5.07□□□□□ -1.6
NUP153-203ENST00000613258 PCLOQ9Y6V0 5065 aa5.07□□□□□ -1.6
NUP153-203ENST00000613258 SPRR2DP22532 72 aa5.04□□□□□ -1.6
NUP153-203ENST00000613258 MUC17Q685J3 4493 aa5.03□□□□□ -1.6
NUP153-203ENST00000613258 EPPK1P58107 5090 aaKnown RBP5.02□□□□□ -1.61
NUP153-203ENST00000613258 KRTAP19-4Q3LI73 84 aa5.02□□□□□ -1.61
NUP153-203ENST00000613258 KRTAP19-2Q3LHN2 52 aa4.98□□□□□ -1.61
NUP153-203ENST00000613258 MT1GP13640 62 aa4.98□□□□□ -1.61
NUP153-203ENST00000613258 LCE2BO14633 110 aa4.96□□□□□ -1.62
NUP153-203ENST00000613258 LCE3BQ5TA77 95 aa4.91□□□□□ -1.62
NUP153-203ENST00000613258 ABCA13Q86UQ4 5058 aa4.88□□□□□ -1.63
NUP153-203ENST00000613258 FLGP20930 4061 aaPredicted RBP4.86□□□□□ -1.63
NUP153-203ENST00000613258 KRTAP9-2Q9BYQ4 174 aa4.79□□□□□ -1.64
NUP153-203ENST00000613258 KRTAP4-7Q9BYR0 210 aa4.73□□□□□ -1.65
NUP153-203ENST00000613258 KRTAP12-4P60329 112 aa4.72□□□□□ -1.65
NUP153-203ENST00000613258 KRTAP19-3Q7Z4W3 81 aa4.71□□□□□ -1.65
NUP153-203ENST00000613258 MT1LQ93083 61 aa4.66□□□□□ -1.66
NUP153-203ENST00000613258 MT1EP04732 61 aa4.66□□□□□ -1.66
NUP153-203ENST00000613258 KRTAP19-6Q3LI70 58 aa4.66□□□□□ -1.66
NUP153-203ENST00000613258 LCE2AQ5TA79 106 aaPredicted RBP4.63□□□□□ -1.67
NUP153-203ENST00000613258 FAT4Q6V0I7 4981 aa4.63□□□□□ -1.67
NUP153-203ENST00000613258 LCE2DQ5TA82 110 aaPredicted RBP4.58□□□□□ -1.68
NUP153-203ENST00000613258 RNF213Q63HN8 5207 aa4.58□□□□□ -1.68
NUP153-203ENST00000613258 SPRR5A0A1B0GTR4 108 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms