RNA–Protein interactions for RNA: ENST00000612349.1

SMAD6-205, Transcript of SMAD family member 6, humanhuman

Gene SMAD6, Length 5,198 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-205ENST00000612349 DNAH9Q9NYC9 4486 aa9.03□□□□□ -0.96
SMAD6-205ENST00000612349 KRTAP23-1A1A580 65 aa9.01□□□□□ -0.97
SMAD6-205ENST00000612349 KRTAP12-3P60328 96 aa9□□□□□ -0.97
SMAD6-205ENST00000612349 DNHD1Q96M86 4753 aa8.94□□□□□ -0.98
SMAD6-205ENST00000612349 CRCT1Q9UGL9 99 aa8.91□□□□□ -0.98
SMAD6-205ENST00000612349 CSMD3Q7Z407 3707 aa8.91□□□□□ -0.98
SMAD6-205ENST00000612349 PLECQ15149 4684 aaKnown RBP8.87□□□□□ -0.99
SMAD6-205ENST00000612349 LORP23490 312 aaPredicted RBP8.81□□□□□ -1
SMAD6-205ENST00000612349 LCE3AQ5TA76 89 aa8.79□□□□□ -1
SMAD6-205ENST00000612349 DNAH1Q9P2D7 4330 aa8.74□□□□□ -1.01
SMAD6-205ENST00000612349 DNAH11Q96DT5 4516 aa8.74□□□□□ -1.01
SMAD6-205ENST00000612349 DNAH10Q8IVF4 4471 aa8.68□□□□□ -1.02
SMAD6-205ENST00000612349 KRTAP4-1Q9BYQ7 146 aa8.64□□□□□ -1.03
SMAD6-205ENST00000612349 KRTAP8-1Q8IUC2 63 aa8.63□□□□□ -1.03
SMAD6-205ENST00000612349 VPS13DQ5THJ4 4388 aa8.6□□□□□ -1.03
SMAD6-205ENST00000612349 DYNC1H1Q14204 4646 aaKnown RBP8.59□□□□□ -1.03
SMAD6-205ENST00000612349 DNAH17Q9UFH2 4485 aa8.54□□□□□ -1.04
SMAD6-205ENST00000612349 RYR1P21817 5038 aa8.51□□□□□ -1.05
SMAD6-205ENST00000612349 FAT1Q14517 4588 aa8.5□□□□□ -1.05
SMAD6-205ENST00000612349 LRP1BQ9NZR2 4599 aa8.48□□□□□ -1.05
SMAD6-205ENST00000612349 MT1HP80294 61 aa8.48□□□□□ -1.05
SMAD6-205ENST00000612349 STARD9Q9P2P6 4700 aa8.47□□□□□ -1.05
SMAD6-205ENST00000612349 MT2AP02795 61 aa8.37□□□□□ -1.07
SMAD6-205ENST00000612349 DNAH2Q9P225 4427 aa8.36□□□□□ -1.07
SMAD6-205ENST00000612349 SPRR2GQ9BYE4 73 aa8.34□□□□□ -1.07
SMAD6-205ENST00000612349 SACSQ9NZJ4 4579 aa8.33□□□□□ -1.08
SMAD6-205ENST00000612349 DNAH3Q8TD57 4116 aa8.31□□□□□ -1.08
SMAD6-205ENST00000612349 KRTAP10-5P60370 271 aa8.29□□□□□ -1.08
SMAD6-205ENST00000612349 PRKDCP78527 4128 aaKnown RBP8.29□□□□□ -1.08
SMAD6-205ENST00000612349 ANK2Q01484 3957 aa8.28□□□□□ -1.08
SMAD6-205ENST00000612349 DNAH8Q96JB1 4490 aa8.27□□□□□ -1.09
SMAD6-205ENST00000612349 FAT2Q9NYQ8 4349 aa8.24□□□□□ -1.09
SMAD6-205ENST00000612349 DYNC2H1Q8NCM8 4307 aaKnown RBP8.21□□□□□ -1.1
SMAD6-205ENST00000612349 MT1FP04733 61 aa8.19□□□□□ -1.1
SMAD6-205ENST00000612349 KIAA1109Q2LD37 5005 aa8.15□□□□□ -1.1
SMAD6-205ENST00000612349 KMT2AQ03164 3969 aa8.14□□□□□ -1.11
SMAD6-205ENST00000612349 APOBP04114 4563 aaKnown RBP8.1□□□□□ -1.11
SMAD6-205ENST00000612349 RYR3Q15413 4870 aa8.05□□□□□ -1.12
SMAD6-205ENST00000612349 CMYA5Q8N3K9 4069 aa8.04□□□□□ -1.12
SMAD6-205ENST00000612349 KRTAP17-1Q9BYP8 105 aa8.01□□□□□ -1.13
SMAD6-205ENST00000612349 SPRR2FQ96RM1 72 aa8□□□□□ -1.13
SMAD6-205ENST00000612349 KRTAP19-4Q3LI73 84 aa8□□□□□ -1.13
SMAD6-205ENST00000612349 KRTAP10-7P60409 375 aaPredicted RBP7.99□□□□□ -1.13
SMAD6-205ENST00000612349 VPS13BQ7Z7G8 4022 aa7.97□□□□□ -1.13
SMAD6-205ENST00000612349 MYCBP2O75592 4640 aa7.94□□□□□ -1.14
SMAD6-205ENST00000612349 KRTAP19-5Q3LI72 72 aa7.93□□□□□ -1.14
SMAD6-205ENST00000612349 LYSTQ99698 3801 aa7.92□□□□□ -1.14
SMAD6-205ENST00000612349 RYR2Q92736 4967 aa7.83□□□□□ -1.16
SMAD6-205ENST00000612349 LCE3CQ5T5A8 94 aa7.82□□□□□ -1.16
SMAD6-205ENST00000612349 FRAS1Q86XX4 4008 aa7.81□□□□□ -1.16
SMAD6-205ENST00000612349 DNAH6Q9C0G6 4158 aa7.81□□□□□ -1.16
SMAD6-205ENST00000612349 HECTD4Q9Y4D8 3996 aa7.8□□□□□ -1.16
SMAD6-205ENST00000612349 KRTAP19-8Q3LI54 63 aa7.78□□□□□ -1.16
SMAD6-205ENST00000612349 DNAH7Q8WXX0 4024 aa7.77□□□□□ -1.17
SMAD6-205ENST00000612349 BIRC6Q9NR09 4857 aa7.77□□□□□ -1.17
SMAD6-205ENST00000612349 KRTAP19-1Q8IUB9 90 aa7.75□□□□□ -1.17
SMAD6-205ENST00000612349 FAT3Q8TDW7 4589 aa7.75□□□□□ -1.17
SMAD6-205ENST00000612349 LRP1Q07954 4544 aaKnown RBP7.74□□□□□ -1.17
SMAD6-205ENST00000612349 HERC2O95714 4834 aa7.69□□□□□ -1.18
SMAD6-205ENST00000612349 HYDINQ4G0P3 5121 aa7.58□□□□□ -1.2
SMAD6-205ENST00000612349 KRTAP9-8Q9BYQ0 159 aa7.52□□□□□ -1.21
SMAD6-205ENST00000612349 SPRR2EP22531 72 aa7.5□□□□□ -1.21
SMAD6-205ENST00000612349 SPRR2BP35325 72 aa7.5□□□□□ -1.21
SMAD6-205ENST00000612349 SPRR2AP35326 72 aa7.5□□□□□ -1.21
SMAD6-205ENST00000612349 MT1XP80297 61 aa7.48□□□□□ -1.21
SMAD6-205ENST00000612349 MT1BP07438 61 aa7.48□□□□□ -1.21
SMAD6-205ENST00000612349 PCLOQ9Y6V0 5065 aa7.47□□□□□ -1.21
SMAD6-205ENST00000612349 LCE2CQ5TA81 110 aa7.45□□□□□ -1.22
SMAD6-205ENST00000612349 LRP2P98164 4655 aa7.45□□□□□ -1.22
SMAD6-205ENST00000612349 PKHD1P08F94 4074 aa7.41□□□□□ -1.22
SMAD6-205ENST00000612349 PKD1P98161 4303 aa7.38□□□□□ -1.23
SMAD6-205ENST00000612349 HSPG2P98160 4391 aa7.36□□□□□ -1.23
SMAD6-205ENST00000612349 HERC1Q15751 4861 aa7.36□□□□□ -1.23
SMAD6-205ENST00000612349 KRTAP9-3Q9BYQ3 159 aa7.34□□□□□ -1.23
SMAD6-205ENST00000612349 SPRR5A0A1B0GTR4 108 aa7.31□□□□□ -1.24
SMAD6-205ENST00000612349 SPRR2DP22532 72 aa7.28□□□□□ -1.24
SMAD6-205ENST00000612349 MT1GP13640 62 aa7.27□□□□□ -1.25
SMAD6-205ENST00000612349 LCE2BO14633 110 aa7.27□□□□□ -1.25
SMAD6-205ENST00000612349 KRTAP12-4P60329 112 aa7.22□□□□□ -1.25
SMAD6-205ENST00000612349 KRTAP4-8A0A0G2JLE6 195 aa7.21□□□□□ -1.26
SMAD6-205ENST00000612349 KRTAP4-8Q9BYQ9 185 aa7.21□□□□□ -1.26
SMAD6-205ENST00000612349 LCE3BQ5TA77 95 aa7.19□□□□□ -1.26
SMAD6-205ENST00000612349 KRTAP19-2Q3LHN2 52 aa7.12□□□□□ -1.27
SMAD6-205ENST00000612349 KMT2CQ8NEZ4 4911 aaKnown RBP7.09□□□□□ -1.27
SMAD6-205ENST00000612349 PKHD1L1Q86WI1 4243 aa7.09□□□□□ -1.27
SMAD6-205ENST00000612349 EPPK1P58107 5090 aaKnown RBP7.09□□□□□ -1.27
SMAD6-205ENST00000612349 KRTAP9-2Q9BYQ4 174 aa7.07□□□□□ -1.28
SMAD6-205ENST00000612349 LPAP08519 4548 aa7.04□□□□□ -1.28
SMAD6-205ENST00000612349 TNXBP22105 4242 aa7□□□□□ -1.29
SMAD6-205ENST00000612349 ABCA13Q86UQ4 5058 aa6.95□□□□□ -1.3
SMAD6-205ENST00000612349 KRTAP19-3Q7Z4W3 81 aa6.94□□□□□ -1.3
SMAD6-205ENST00000612349 MUC17Q685J3 4493 aa6.9□□□□□ -1.3
SMAD6-205ENST00000612349 LCE3DQ9BYE3 92 aa6.89□□□□□ -1.31
SMAD6-205ENST00000612349 KRTAP9-6A0A140TA67 174 aa6.87□□□□□ -1.31
SMAD6-205ENST00000612349 LCE2DQ5TA82 110 aaPredicted RBP6.85□□□□□ -1.31
SMAD6-205ENST00000612349 MT1LQ93083 61 aa6.82□□□□□ -1.32
SMAD6-205ENST00000612349 LCE3EQ5T5B0 92 aa6.79□□□□□ -1.32
SMAD6-205ENST00000612349 FLGP20930 4061 aaPredicted RBP6.78□□□□□ -1.32
SMAD6-205ENST00000612349 MT1EP04732 61 aa6.77□□□□□ -1.33
SMAD6-205ENST00000612349 UBR4Q5T4S7 5183 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms