RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 NREPQ16612 68 aa4.96□□□□□ -1.62
PDLIM1P1-201ENST00000604187 S100A6P06703 90 aa4.94□□□□□ -1.62
PDLIM1P1-201ENST00000604187 SCGB1C2P0DMR2 95 aa4.94□□□□□ -1.62
PDLIM1P1-201ENST00000604187 MT1XP80297 61 aa4.94□□□□□ -1.62
PDLIM1P1-201ENST00000604187 C1orf64Q8NEQ6 169 aa4.94□□□□□ -1.62
PDLIM1P1-201ENST00000604187 VAMP8Q9BV40 100 aa4.94□□□□□ -1.62
PDLIM1P1-201ENST00000604187 HSD52Q0P140 79 aa4.92□□□□□ -1.62
PDLIM1P1-201ENST00000604187 HCG22E2RYF7 251 aa4.91□□□□□ -1.62
PDLIM1P1-201ENST00000604187 JMJD7-PLA2G4BH0Y9G9 81 aa4.91□□□□□ -1.62
PDLIM1P1-201ENST00000604187 PDE6GP18545 87 aa4.9□□□□□ -1.63
PDLIM1P1-201ENST00000604187 KRTAP5-3Q6L8H2 238 aa4.9□□□□□ -1.63
PDLIM1P1-201ENST00000604187 C14orf132Q9NPU4 83 aa4.9□□□□□ -1.63
PDLIM1P1-201ENST00000604187 KRTAP12-2P59991 146 aa4.89□□□□□ -1.63
PDLIM1P1-201ENST00000604187 CASC2Q6XLA1 102 aa4.88□□□□□ -1.63
PDLIM1P1-201ENST00000604187 CXCL6P80162 114 aa4.87□□□□□ -1.63
PDLIM1P1-201ENST00000604187 S100A1P23297 94 aa4.86□□□□□ -1.63
PDLIM1P1-201ENST00000604187 PCP4P48539 62 aa4.84□□□□□ -1.63
PDLIM1P1-201ENST00000604187 Q8N9L7 120 aa4.84□□□□□ -1.63
PDLIM1P1-201ENST00000604187 HMCN1Q96RW7 5635 aa4.83□□□□□ -1.64
PDLIM1P1-201ENST00000604187 BPY2O14599 106 aa4.83□□□□□ -1.64
PDLIM1P1-201ENST00000604187 ATXN8Q156A1 80 aa4.83□□□□□ -1.64
PDLIM1P1-201ENST00000604187 A8MUN3 132 aa4.8□□□□□ -1.64
PDLIM1P1-201ENST00000604187 PLAC4Q8WY50 150 aa4.8□□□□□ -1.64
PDLIM1P1-201ENST00000604187 A0A087WVE0 104 aa4.79□□□□□ -1.64
PDLIM1P1-201ENST00000604187 A0A0A0MQY5 61 aa4.78□□□□□ -1.64
PDLIM1P1-201ENST00000604187 H0YAA0 97 aa4.74□□□□□ -1.65
PDLIM1P1-201ENST00000604187 NAA38Q9BRA0 125 aaKnown RBP4.74□□□□□ -1.65
PDLIM1P1-201ENST00000604187 AHNAK2Q8IVF2 5795 aa4.74□□□□□ -1.65
PDLIM1P1-201ENST00000604187 KRTAP10-7P60409 375 aaPredicted RBP4.71□□□□□ -1.66
PDLIM1P1-201ENST00000604187 ADM2Q7Z4H4 148 aa4.71□□□□□ -1.66
PDLIM1P1-201ENST00000604187 UQCR10Q9UDW1 63 aa4.7□□□□□ -1.66
PDLIM1P1-201ENST00000604187 NDUFC1O43677 76 aa4.68□□□□□ -1.66
PDLIM1P1-201ENST00000604187 KRTAP10-12P60413 245 aa4.67□□□□□ -1.66
PDLIM1P1-201ENST00000604187 PYY3Q5JQD4 70 aa4.65□□□□□ -1.67
PDLIM1P1-201ENST00000604187 CYP4F30PQ9H0H9 118 aa4.64□□□□□ -1.67
PDLIM1P1-201ENST00000604187 TP53AIP1Q9HCN2 124 aa4.63□□□□□ -1.67
PDLIM1P1-201ENST00000604187 R4GN34 69 aa4.63□□□□□ -1.67
PDLIM1P1-201ENST00000604187 K7EP34 96 aa4.62□□□□□ -1.67
PDLIM1P1-201ENST00000604187 TSTD3H0UI37 97 aa4.59□□□□□ -1.67
PDLIM1P1-201ENST00000604187 M0QZ58 72 aa4.58□□□□□ -1.68
PDLIM1P1-201ENST00000604187 H3BT86 120 aa4.57□□□□□ -1.68
PDLIM1P1-201ENST00000604187 M0R143 59 aa4.56□□□□□ -1.68
PDLIM1P1-201ENST00000604187 LINC01554Q52M75 96 aa4.56□□□□□ -1.68
PDLIM1P1-201ENST00000604187 LOC101927531A0A1B0GV80 90 aa4.54□□□□□ -1.68
PDLIM1P1-201ENST00000604187 P0C880 135 aa4.54□□□□□ -1.68
PDLIM1P1-201ENST00000604187 UBL5Q9BZL1 73 aa4.53□□□□□ -1.68
PDLIM1P1-201ENST00000604187 MT4P47944 62 aa4.51□□□□□ -1.69
PDLIM1P1-201ENST00000604187 C20orf197Q8N268 126 aa4.51□□□□□ -1.69
PDLIM1P1-201ENST00000604187 TRAV22A0A0B4J277 110 aa4.5□□□□□ -1.69
PDLIM1P1-201ENST00000604187 ACYP1P07311 99 aa4.5□□□□□ -1.69
PDLIM1P1-201ENST00000604187 KRTAP5-10Q6L8G5 202 aa4.5□□□□□ -1.69
PDLIM1P1-201ENST00000604187 KRTAP19-3Q7Z4W3 81 aa4.46□□□□□ -1.7
PDLIM1P1-201ENST00000604187 SPCS1Q9Y6A9 102 aa4.45□□□□□ -1.7
PDLIM1P1-201ENST00000604187 MT1EP04732 61 aa4.42□□□□□ -1.7
PDLIM1P1-201ENST00000604187 KRTAP19-7Q3SYF9 63 aa4.42□□□□□ -1.7
PDLIM1P1-201ENST00000604187 BATFQ16520 125 aa4.41□□□□□ -1.7
PDLIM1P1-201ENST00000604187 A0A1W2PPM0 123 aa4.4□□□□□ -1.71
PDLIM1P1-201ENST00000604187 CYSTM1Q9H1C7 97 aa4.4□□□□□ -1.71
PDLIM1P1-201ENST00000604187 LOC105371267A0A1B0GV96 52 aa4.38□□□□□ -1.71
PDLIM1P1-201ENST00000604187 KRTAP5-7Q6L8G8 165 aa4.38□□□□□ -1.71
PDLIM1P1-201ENST00000604187 H0Y9P7 68 aa4.37□□□□□ -1.71
PDLIM1P1-201ENST00000604187 ATOX1O00244 68 aa4.36□□□□□ -1.71
PDLIM1P1-201ENST00000604187 MT-ATP8P03928 68 aa4.35□□□□□ -1.71
PDLIM1P1-201ENST00000604187 TAX1BP3O14907 124 aa4.33□□□□□ -1.72
PDLIM1P1-201ENST00000604187 UQCRQO14949 82 aa4.32□□□□□ -1.72
PDLIM1P1-201ENST00000604187 SMIM6P0DI80 62 aa4.29□□□□□ -1.72
PDLIM1P1-201ENST00000604187 MT1GP13640 62 aa4.28□□□□□ -1.72
PDLIM1P1-201ENST00000604187 KRTAP5-4Q6L8H1 288 aa4.28□□□□□ -1.72
PDLIM1P1-201ENST00000604187 MT3P25713 68 aa4.27□□□□□ -1.73
PDLIM1P1-201ENST00000604187 SPRR5A0A1B0GTR4 108 aa4.26□□□□□ -1.73
PDLIM1P1-201ENST00000604187 PP632Q6XCG6 107 aa4.26□□□□□ -1.73
PDLIM1P1-201ENST00000604187 LINC00208Q96KT6 92 aa4.25□□□□□ -1.73
PDLIM1P1-201ENST00000604187 PRO0461Q9UI25 63 aa4.25□□□□□ -1.73
PDLIM1P1-201ENST00000604187 MT1MQ8N339 61 aa4.23□□□□□ -1.73
PDLIM1P1-201ENST00000604187 KRTAP19-5Q3LI72 72 aa4.2□□□□□ -1.74
PDLIM1P1-201ENST00000604187 CAMK2N1Q7Z7J9 78 aa4.2□□□□□ -1.74
PDLIM1P1-201ENST00000604187 AHNAKQ09666 5890 aaKnown RBP4.2□□□□□ -1.74
PDLIM1P1-201ENST00000604187 PCP4L1A6NKN8 68 aa4.19□□□□□ -1.74
PDLIM1P1-201ENST00000604187 DMAC1Q96GE9 116 aa4.19□□□□□ -1.74
PDLIM1P1-201ENST00000604187 HIST1H4AP62805 103 aaKnown RBP4.18□□□□□ -1.74
PDLIM1P1-201ENST00000604187 KRTAP4-3Q9BYR4 195 aa4.18□□□□□ -1.74
PDLIM1P1-201ENST00000604187 MP68P56378 58 aa4.15□□□□□ -1.75
PDLIM1P1-201ENST00000604187 MT1LQ93083 61 aa4.14□□□□□ -1.75
PDLIM1P1-201ENST00000604187 A0A0D9SG42 100 aa4.12□□□□□ -1.75
PDLIM1P1-201ENST00000604187 ATP5EP2Q5VTU8 51 aa4.11□□□□□ -1.75
PDLIM1P1-201ENST00000604187 KRTAP20-2Q3LI61 65 aa4.09□□□□□ -1.75
PDLIM1P1-201ENST00000604187 ETDBQ3ZM63 59 aa4.09□□□□□ -1.75
PDLIM1P1-201ENST00000604187 TRAV7A0A075B6U4 112 aa4.07□□□□□ -1.76
PDLIM1P1-201ENST00000604187 KRTAP13-4Q3LI77 160 aa4.06□□□□□ -1.76
PDLIM1P1-201ENST00000604187 OCR1Q9BZK8 76 aa4.06□□□□□ -1.76
PDLIM1P1-201ENST00000604187 MUC5ACP98088 5654 aa4.03□□□□□ -1.76
PDLIM1P1-201ENST00000604187 SPTSSBQ8NFR3 76 aa4.03□□□□□ -1.76
PDLIM1P1-201ENST00000604187 MUC5BQ9HC84 5762 aaPredicted RBP4.02□□□□□ -1.77
PDLIM1P1-201ENST00000604187 F8W1H4 67 aa4.01□□□□□ -1.77
PDLIM1P1-201ENST00000604187 COL5A1-AS1Q5SY13 56 aa4.01□□□□□ -1.77
PDLIM1P1-201ENST00000604187 H3BPC8 53 aa3.99□□□□□ -1.77
PDLIM1P1-201ENST00000604187 GTF2H5Q6ZYL4 71 aa3.98□□□□□ -1.77
PDLIM1P1-201ENST00000604187 A0A1B0GV90 55 aa3.97□□□□□ -1.77
PDLIM1P1-201ENST00000604187 FAM240AA0A1B0GVK7 77 aa3.96□□□□□ -1.78
PDLIM1P1-201ENST00000604187 ACYP2P14621 99 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms