RNA–Protein interactions for RNA: ENST00000600935.1

NUP62-222, Transcript of nucleoporin 62, human

TSL 4

Gene NUP62, Length 587 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-222	ENST00000600935	AHNAK2	Q8IVF2	5795 aa		4.45	□□□□□ -1.7
NUP62-222	ENST00000600935		A0A087WVE0	104 aa		4.45	□□□□□ -1.7
NUP62-222	ENST00000600935	JMJD7-PLA2G4B	H0Y9G9	81 aa		4.43	□□□□□ -1.7
NUP62-222	ENST00000600935	KRTAP10-7	P60409	375 aa	Predicted RBP	4.43	□□□□□ -1.7
NUP62-222	ENST00000600935	C14orf132	Q9NPU4	83 aa		4.43	□□□□□ -1.7
NUP62-222	ENST00000600935	PDE6G	P18545	87 aa		4.42	□□□□□ -1.7
NUP62-222	ENST00000600935	CXCL6	P80162	114 aa		4.42	□□□□□ -1.7
NUP62-222	ENST00000600935	HSD52	Q0P140	79 aa		4.41	□□□□□ -1.7
NUP62-222	ENST00000600935	CASC2	Q6XLA1	102 aa		4.41	□□□□□ -1.7
NUP62-222	ENST00000600935		A8MUN3	132 aa		4.4	□□□□□ -1.71
NUP62-222	ENST00000600935	SCGB1C2	P0DMR2	95 aa		4.4	□□□□□ -1.71
NUP62-222	ENST00000600935	KRTAP10-12	P60413	245 aa		4.4	□□□□□ -1.71
NUP62-222	ENST00000600935	PLAC4	Q8WY50	150 aa		4.4	□□□□□ -1.71
NUP62-222	ENST00000600935		H0YAA0	97 aa		4.39	□□□□□ -1.71
NUP62-222	ENST00000600935		Q8N9L7	120 aa		4.39	□□□□□ -1.71
NUP62-222	ENST00000600935	UQCR10	Q9UDW1	63 aa		4.39	□□□□□ -1.71
NUP62-222	ENST00000600935	LCE1D	Q5T752	114 aa		4.38	□□□□□ -1.71
NUP62-222	ENST00000600935	BPY2	O14599	106 aa		4.35	□□□□□ -1.71
NUP62-222	ENST00000600935	BATF	Q16520	125 aa		4.33	□□□□□ -1.72
NUP62-222	ENST00000600935	KRTAP5-10	Q6L8G5	202 aa		4.33	□□□□□ -1.72
NUP62-222	ENST00000600935		M0R143	59 aa		4.32	□□□□□ -1.72
NUP62-222	ENST00000600935	ATXN8	Q156A1	80 aa		4.32	□□□□□ -1.72
NUP62-222	ENST00000600935	ADM2	Q7Z4H4	148 aa		4.32	□□□□□ -1.72
NUP62-222	ENST00000600935	LCE5A	Q5TCM9	118 aa		4.3	□□□□□ -1.72
NUP62-222	ENST00000600935	COL5A1-AS1	Q5SY13	56 aa		4.27	□□□□□ -1.73
NUP62-222	ENST00000600935	NAA38	Q9BRA0	125 aa	Known RBP	4.26	□□□□□ -1.73
NUP62-222	ENST00000600935	NDUFC1	O43677	76 aa		4.24	□□□□□ -1.73
NUP62-222	ENST00000600935	MT4	P47944	62 aa		4.24	□□□□□ -1.73
NUP62-222	ENST00000600935	CYP4F30P	Q9H0H9	118 aa		4.24	□□□□□ -1.73
NUP62-222	ENST00000600935		R4GN34	69 aa		4.22	□□□□□ -1.73
NUP62-222	ENST00000600935		A0A1B0GV90	55 aa		4.21	□□□□□ -1.74
NUP62-222	ENST00000600935	PCP4	P48539	62 aa		4.21	□□□□□ -1.74
NUP62-222	ENST00000600935	KRTAP5-7	Q6L8G8	165 aa		4.21	□□□□□ -1.74
NUP62-222	ENST00000600935		K7EP34	96 aa		4.2	□□□□□ -1.74
NUP62-222	ENST00000600935		P0C880	135 aa		4.2	□□□□□ -1.74
NUP62-222	ENST00000600935	LCE4A	Q5TA78	99 aa		4.2	□□□□□ -1.74
NUP62-222	ENST00000600935	KRTAP19-3	Q7Z4W3	81 aa		4.19	□□□□□ -1.74
NUP62-222	ENST00000600935	C9orf118	A6NHY6	69 aa		4.18	□□□□□ -1.74
NUP62-222	ENST00000600935		M0QZ58	72 aa		4.18	□□□□□ -1.74
NUP62-222	ENST00000600935	TAX1BP3	O14907	124 aa		4.18	□□□□□ -1.74
NUP62-222	ENST00000600935	KRTAP19-7	Q3SYF9	63 aa		4.18	□□□□□ -1.74
NUP62-222	ENST00000600935	TP53AIP1	Q9HCN2	124 aa		4.18	□□□□□ -1.74
NUP62-222	ENST00000600935	LOC100996750	A0A140TA64	210 aa		4.17	□□□□□ -1.74
NUP62-222	ENST00000600935	KRTAP4-6	Q9BYQ5	205 aa		4.17	□□□□□ -1.74
NUP62-222	ENST00000600935	GTF2H5	Q6ZYL4	71 aa		4.16	□□□□□ -1.74
NUP62-222	ENST00000600935	MT1E	P04732	61 aa		4.15	□□□□□ -1.75
NUP62-222	ENST00000600935		A0A1W2PPM0	123 aa		4.14	□□□□□ -1.75
NUP62-222	ENST00000600935	LINC01554	Q52M75	96 aa		4.14	□□□□□ -1.75
NUP62-222	ENST00000600935	SPCS1	Q9Y6A9	102 aa		4.14	□□□□□ -1.75
NUP62-222	ENST00000600935		H3BT86	120 aa		4.11	□□□□□ -1.75
NUP62-222	ENST00000600935	CYSTM1	Q9H1C7	97 aa		4.11	□□□□□ -1.75
NUP62-222	ENST00000600935	KRTAP5-4	Q6L8H1	288 aa		4.1	□□□□□ -1.75
NUP62-222	ENST00000600935	KRTAP5-3	Q6L8H2	238 aa		4.1	□□□□□ -1.75
NUP62-222	ENST00000600935	LOC101927531	A0A1B0GV80	90 aa		4.09	□□□□□ -1.75
NUP62-222	ENST00000600935	TRAV22	A0A0B4J277	110 aa		4.06	□□□□□ -1.76
NUP62-222	ENST00000600935	C20orf197	Q8N268	126 aa		4.06	□□□□□ -1.76
NUP62-222	ENST00000600935		F8W1H4	67 aa		4.05	□□□□□ -1.76
NUP62-222	ENST00000600935	ACYP1	P07311	99 aa		4.05	□□□□□ -1.76
NUP62-222	ENST00000600935	UBL5	Q9BZL1	73 aa		4.04	□□□□□ -1.76
NUP62-222	ENST00000600935	SPRR5	A0A1B0GTR4	108 aa		4.03	□□□□□ -1.76
NUP62-222	ENST00000600935	MT1G	P13640	62 aa		4.02	□□□□□ -1.77
NUP62-222	ENST00000600935		J3QR89	54 aa		4	□□□□□ -1.77
NUP62-222	ENST00000600935	ETDB	Q3ZM63	59 aa		3.99	□□□□□ -1.77
NUP62-222	ENST00000600935	MT1M	Q8N339	61 aa		3.98	□□□□□ -1.77
NUP62-222	ENST00000600935	PRO0461	Q9UI25	63 aa		3.98	□□□□□ -1.77
NUP62-222	ENST00000600935		K7ERU9	68 aa		3.97	□□□□□ -1.77
NUP62-222	ENST00000600935		A0A0A0MQY5	61 aa		3.95	□□□□□ -1.78
NUP62-222	ENST00000600935	PP632	Q6XCG6	107 aa		3.94	□□□□□ -1.78
NUP62-222	ENST00000600935		H0Y9P7	68 aa		3.93	□□□□□ -1.78
NUP62-222	ENST00000600935	KRTAP4-3	Q9BYR4	195 aa		3.93	□□□□□ -1.78
NUP62-222	ENST00000600935	MT-ATP8	P03928	68 aa		3.91	□□□□□ -1.78
NUP62-222	ENST00000600935	KRTAP19-5	Q3LI72	72 aa		3.91	□□□□□ -1.78
NUP62-222	ENST00000600935	ATOX1	O00244	68 aa		3.9	□□□□□ -1.79
NUP62-222	ENST00000600935	UQCRQ	O14949	82 aa		3.88	□□□□□ -1.79
NUP62-222	ENST00000600935	KRTAP20-2	Q3LI61	65 aa		3.88	□□□□□ -1.79
NUP62-222	ENST00000600935	MT1L	Q93083	61 aa		3.88	□□□□□ -1.79
NUP62-222	ENST00000600935	KRTAP4-12	Q9BQ66	201 aa		3.86	□□□□□ -1.79
NUP62-222	ENST00000600935	FAM240A	A0A1B0GVK7	77 aa		3.84	□□□□□ -1.79
NUP62-222	ENST00000600935	KRTAP23-1	A1A580	65 aa		3.83	□□□□□ -1.8
NUP62-222	ENST00000600935	LINC00208	Q96KT6	92 aa		3.82	□□□□□ -1.8
NUP62-222	ENST00000600935	LINC00643	Q86TS7	51 aa		3.81	□□□□□ -1.8
NUP62-222	ENST00000600935	AHNAK	Q09666	5890 aa	Known RBP	3.8	□□□□□ -1.8
NUP62-222	ENST00000600935	DMAC1	Q96GE9	116 aa		3.8	□□□□□ -1.8
NUP62-222	ENST00000600935		A0A0D9SG42	100 aa		3.79	□□□□□ -1.8
NUP62-222	ENST00000600935	KRTAP19-4	Q3LI73	84 aa		3.78	□□□□□ -1.8
NUP62-222	ENST00000600935	CAMK2N1	Q7Z7J9	78 aa		3.78	□□□□□ -1.8
NUP62-222	ENST00000600935	HIST1H4A	P62805	103 aa	Known RBP	3.76	□□□□□ -1.81
NUP62-222	ENST00000600935	ATP5EP2	Q5VTU8	51 aa		3.76	□□□□□ -1.81
NUP62-222	ENST00000600935	KRTAP13-4	Q3LI77	160 aa		3.75	□□□□□ -1.81
NUP62-222	ENST00000600935	MUC5AC	P98088	5654 aa		3.75	□□□□□ -1.81
NUP62-222	ENST00000600935	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.74	□□□□□ -1.81
NUP62-222	ENST00000600935	SYNE1	Q8NF91	8797 aa	Known RBP	3.74	□□□□□ -1.81
NUP62-222	ENST00000600935	SCGB1A1	P11684	91 aa		3.73	□□□□□ -1.81
NUP62-222	ENST00000600935	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.73	□□□□□ -1.81
NUP62-222	ENST00000600935	KRTAP4-7	Q9BYR0	210 aa		3.69	□□□□□ -1.82
NUP62-222	ENST00000600935	OCR1	Q9BZK8	76 aa		3.68	□□□□□ -1.82
NUP62-222	ENST00000600935	MP68	P56378	58 aa		3.67	□□□□□ -1.82
NUP62-222	ENST00000600935	ANAPC13	Q9BS18	74 aa		3.67	□□□□□ -1.82
NUP62-222	ENST00000600935	KRTAP9-9	Q9BYP9	154 aa		3.67	□□□□□ -1.82
NUP62-222	ENST00000600935	KRTAP9-4	Q9BYQ2	154 aa		3.67	□□□□□ -1.82

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms