RNA–Protein interactions for RNA: ENST00000600237.5

SYMPK-215, Transcript of symplekin, humanhuman

TSL 5

Gene SYMPK, Length 5,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-215ENST00000600237 KRTAP12-3P60328 96 aa6.26□□□□□ -1.41
SYMPK-215ENST00000600237 DNHD1Q96M86 4753 aa6.19□□□□□ -1.42
SYMPK-215ENST00000600237 AKAP9Q99996 3911 aa6.17□□□□□ -1.42
SYMPK-215ENST00000600237 LCE3AQ5TA76 89 aa6.15□□□□□ -1.42
SYMPK-215ENST00000600237 LORP23490 312 aaPredicted RBP6.15□□□□□ -1.42
SYMPK-215ENST00000600237 PLECQ15149 4684 aaKnown RBP6.15□□□□□ -1.42
SYMPK-215ENST00000600237 DNAH11Q96DT5 4516 aa6.15□□□□□ -1.43
SYMPK-215ENST00000600237 ZNF469Q96JG9 3925 aaPredicted RBP6.13□□□□□ -1.43
SYMPK-215ENST00000600237 DNAH1Q9P2D7 4330 aa6.11□□□□□ -1.43
SYMPK-215ENST00000600237 DNAH10Q8IVF4 4471 aa6.11□□□□□ -1.43
SYMPK-215ENST00000600237 CRCT1Q9UGL9 99 aa6.05□□□□□ -1.44
SYMPK-215ENST00000600237 VPS13DQ5THJ4 4388 aa6.01□□□□□ -1.45
SYMPK-215ENST00000600237 CSMD3Q7Z407 3707 aa6□□□□□ -1.45
SYMPK-215ENST00000600237 KRTAP4-1Q9BYQ7 146 aa6□□□□□ -1.45
SYMPK-215ENST00000600237 DYNC1H1Q14204 4646 aaKnown RBP5.99□□□□□ -1.45
SYMPK-215ENST00000600237 DNAH17Q9UFH2 4485 aa5.97□□□□□ -1.45
SYMPK-215ENST00000600237 MT1HP80294 61 aa5.94□□□□□ -1.46
SYMPK-215ENST00000600237 LRP1BQ9NZR2 4599 aa5.91□□□□□ -1.46
SYMPK-215ENST00000600237 DNAH2Q9P225 4427 aa5.9□□□□□ -1.47
SYMPK-215ENST00000600237 RYR1P21817 5038 aa5.88□□□□□ -1.47
SYMPK-215ENST00000600237 FAT1Q14517 4588 aa5.86□□□□□ -1.47
SYMPK-215ENST00000600237 KRTAP8-1Q8IUC2 63 aa5.86□□□□□ -1.47
SYMPK-215ENST00000600237 STARD9Q9P2P6 4700 aa5.85□□□□□ -1.47
SYMPK-215ENST00000600237 MT2AP02795 61 aa5.83□□□□□ -1.48
SYMPK-215ENST00000600237 SPRR2GQ9BYE4 73 aa5.8□□□□□ -1.48
SYMPK-215ENST00000600237 FAT2Q9NYQ8 4349 aa5.8□□□□□ -1.48
SYMPK-215ENST00000600237 DYNC2H1Q8NCM8 4307 aaKnown RBP5.77□□□□□ -1.49
SYMPK-215ENST00000600237 SACSQ9NZJ4 4579 aa5.77□□□□□ -1.49
SYMPK-215ENST00000600237 KRTAP10-5P60370 271 aa5.74□□□□□ -1.49
SYMPK-215ENST00000600237 PRKDCP78527 4128 aaKnown RBP5.73□□□□□ -1.49
SYMPK-215ENST00000600237 MT1FP04733 61 aa5.7□□□□□ -1.5
SYMPK-215ENST00000600237 DNAH3Q8TD57 4116 aa5.69□□□□□ -1.5
SYMPK-215ENST00000600237 ANK2Q01484 3957 aa5.68□□□□□ -1.5
SYMPK-215ENST00000600237 DNAH8Q96JB1 4490 aa5.67□□□□□ -1.5
SYMPK-215ENST00000600237 RYR3Q15413 4870 aa5.62□□□□□ -1.51
SYMPK-215ENST00000600237 KIAA1109Q2LD37 5005 aa5.62□□□□□ -1.51
SYMPK-215ENST00000600237 APOBP04114 4563 aaKnown RBP5.61□□□□□ -1.51
SYMPK-215ENST00000600237 KRTAP17-1Q9BYP8 105 aa5.58□□□□□ -1.52
SYMPK-215ENST00000600237 KRTAP19-4Q3LI73 84 aa5.54□□□□□ -1.52
SYMPK-215ENST00000600237 KMT2AQ03164 3969 aa5.53□□□□□ -1.52
SYMPK-215ENST00000600237 VPS13BQ7Z7G8 4022 aa5.51□□□□□ -1.53
SYMPK-215ENST00000600237 RYR2Q92736 4967 aa5.5□□□□□ -1.53
SYMPK-215ENST00000600237 KRTAP19-5Q3LI72 72 aa5.5□□□□□ -1.53
SYMPK-215ENST00000600237 LCE3CQ5T5A8 94 aa5.48□□□□□ -1.53
SYMPK-215ENST00000600237 SPRR2FQ96RM1 72 aa5.47□□□□□ -1.53
SYMPK-215ENST00000600237 DNAH6Q9C0G6 4158 aa5.46□□□□□ -1.53
SYMPK-215ENST00000600237 FAT3Q8TDW7 4589 aa5.44□□□□□ -1.54
SYMPK-215ENST00000600237 LYSTQ99698 3801 aa5.43□□□□□ -1.54
SYMPK-215ENST00000600237 MYCBP2O75592 4640 aa5.39□□□□□ -1.55
SYMPK-215ENST00000600237 KRTAP19-8Q3LI54 63 aa5.39□□□□□ -1.55
SYMPK-215ENST00000600237 BIRC6Q9NR09 4857 aa5.37□□□□□ -1.55
SYMPK-215ENST00000600237 KRTAP10-7P60409 375 aaPredicted RBP5.37□□□□□ -1.55
SYMPK-215ENST00000600237 KRTAP19-1Q8IUB9 90 aa5.37□□□□□ -1.55
SYMPK-215ENST00000600237 HERC2O95714 4834 aa5.35□□□□□ -1.55
SYMPK-215ENST00000600237 LRP1Q07954 4544 aaKnown RBP5.33□□□□□ -1.56
SYMPK-215ENST00000600237 DNAH7Q8WXX0 4024 aa5.32□□□□□ -1.56
SYMPK-215ENST00000600237 CMYA5Q8N3K9 4069 aa5.3□□□□□ -1.56
SYMPK-215ENST00000600237 KRTAP9-8Q9BYQ0 159 aa5.25□□□□□ -1.57
SYMPK-215ENST00000600237 HERC1Q15751 4861 aa5.24□□□□□ -1.57
SYMPK-215ENST00000600237 MT1XP80297 61 aa5.2□□□□□ -1.58
SYMPK-215ENST00000600237 LCE2CQ5TA81 110 aa5.2□□□□□ -1.58
SYMPK-215ENST00000600237 MT1BP07438 61 aa5.2□□□□□ -1.58
SYMPK-215ENST00000600237 HSPG2P98160 4391 aa5.18□□□□□ -1.58
SYMPK-215ENST00000600237 PCLOQ9Y6V0 5065 aa5.17□□□□□ -1.58
SYMPK-215ENST00000600237 HECTD4Q9Y4D8 3996 aa5.17□□□□□ -1.58
SYMPK-215ENST00000600237 SPRR5A0A1B0GTR4 108 aa5.15□□□□□ -1.58
SYMPK-215ENST00000600237 SPRR2EP22531 72 aa5.15□□□□□ -1.58
SYMPK-215ENST00000600237 SPRR2BP35325 72 aa5.15□□□□□ -1.58
SYMPK-215ENST00000600237 SPRR2AP35326 72 aa5.15□□□□□ -1.58
SYMPK-215ENST00000600237 PKD1P98161 4303 aa5.15□□□□□ -1.58
SYMPK-215ENST00000600237 FRAS1Q86XX4 4008 aa5.14□□□□□ -1.59
SYMPK-215ENST00000600237 KRTAP9-3Q9BYQ3 159 aa5.13□□□□□ -1.59
SYMPK-215ENST00000600237 HYDINQ4G0P3 5121 aa5.12□□□□□ -1.59
SYMPK-215ENST00000600237 LRP2P98164 4655 aa5.09□□□□□ -1.59
SYMPK-215ENST00000600237 PKHD1L1Q86WI1 4243 aa5.06□□□□□ -1.6
SYMPK-215ENST00000600237 SPRR2DP22532 72 aa4.99□□□□□ -1.61
SYMPK-215ENST00000600237 KRTAP12-4P60329 112 aa4.98□□□□□ -1.61
SYMPK-215ENST00000600237 MT1GP13640 62 aa4.97□□□□□ -1.61
SYMPK-215ENST00000600237 LCE3BQ5TA77 95 aa4.97□□□□□ -1.61
SYMPK-215ENST00000600237 PKHD1P08F94 4074 aa4.97□□□□□ -1.61
SYMPK-215ENST00000600237 LCE2BO14633 110 aa4.97□□□□□ -1.61
SYMPK-215ENST00000600237 KRTAP4-8A0A0G2JLE6 195 aa4.97□□□□□ -1.61
SYMPK-215ENST00000600237 KRTAP4-8Q9BYQ9 185 aa4.97□□□□□ -1.61
SYMPK-215ENST00000600237 KRTAP19-2Q3LHN2 52 aa4.96□□□□□ -1.61
SYMPK-215ENST00000600237 KMT2CQ8NEZ4 4911 aaKnown RBP4.87□□□□□ -1.63
SYMPK-215ENST00000600237 EPPK1P58107 5090 aaKnown RBP4.86□□□□□ -1.63
SYMPK-215ENST00000600237 LPAP08519 4548 aa4.86□□□□□ -1.63
SYMPK-215ENST00000600237 ABCA13Q86UQ4 5058 aa4.82□□□□□ -1.64
SYMPK-215ENST00000600237 LCE3DQ9BYE3 92 aa4.8□□□□□ -1.64
SYMPK-215ENST00000600237 KRTAP19-3Q7Z4W3 81 aa4.78□□□□□ -1.64
SYMPK-215ENST00000600237 MUC17Q685J3 4493 aa4.78□□□□□ -1.64
SYMPK-215ENST00000600237 TNXBP22105 4242 aa4.76□□□□□ -1.65
SYMPK-215ENST00000600237 MT1LQ93083 61 aa4.75□□□□□ -1.65
SYMPK-215ENST00000600237 LCE3EQ5T5B0 92 aa4.75□□□□□ -1.65
SYMPK-215ENST00000600237 KRTAP19-6Q3LI70 58 aa4.72□□□□□ -1.65
SYMPK-215ENST00000600237 FLGP20930 4061 aaPredicted RBP4.72□□□□□ -1.65
SYMPK-215ENST00000600237 KRTAP9-2Q9BYQ4 174 aa4.71□□□□□ -1.66
SYMPK-215ENST00000600237 MT1EP04732 61 aa4.7□□□□□ -1.66
SYMPK-215ENST00000600237 SYNE1Q8NF91 8797 aaKnown RBP4.66□□□□□ -1.66
SYMPK-215ENST00000600237 LCE2AQ5TA79 106 aaPredicted RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms