RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 Q6ZQT0 140 aa1.38□□□□□ -2.19
HERC3-213ENST00000598772 C10orf95Q9H7T3 257 aa1.38□□□□□ -2.19
HERC3-213ENST00000598772 CAMK2N1Q7Z7J9 78 aa1.36□□□□□ -2.19
HERC3-213ENST00000598772 C20orf197Q8N268 126 aa1.36□□□□□ -2.19
HERC3-213ENST00000598772 H0YGX0 51 aa1.35□□□□□ -2.19
HERC3-213ENST00000598772 K7EP34 96 aa1.33□□□□□ -2.2
HERC3-213ENST00000598772 KRTAP6-2Q3LI66 62 aa1.33□□□□□ -2.2
HERC3-213ENST00000598772 LCE1FQ5T754 118 aa1.33□□□□□ -2.2
HERC3-213ENST00000598772 ORMDL1Q9P0S3 153 aa1.33□□□□□ -2.2
HERC3-213ENST00000598772 DNAL4O96015 105 aa1.32□□□□□ -2.2
HERC3-213ENST00000598772 CXCL6P80162 114 aa1.32□□□□□ -2.2
HERC3-213ENST00000598772 PAM16Q9Y3D7 125 aa1.32□□□□□ -2.2
HERC3-213ENST00000598772 TMEM256-PLSCR3K7ERE1 68 aa1.31□□□□□ -2.2
HERC3-213ENST00000598772 PET117Q6UWS5 81 aa1.31□□□□□ -2.2
HERC3-213ENST00000598772 C9JAW5 83 aa1.3□□□□□ -2.2
HERC3-213ENST00000598772 SYS1-DBNDD2H3BUS1 97 aa1.3□□□□□ -2.2
HERC3-213ENST00000598772 NREPQ16612 68 aa1.3□□□□□ -2.2
HERC3-213ENST00000598772 C21orf62-AS1Q17RA5 79 aa1.3□□□□□ -2.2
HERC3-213ENST00000598772 CASC2Q6XLA1 102 aa1.3□□□□□ -2.2
HERC3-213ENST00000598772 PHGR1C9JFL3 82 aa1.29□□□□□ -2.2
HERC3-213ENST00000598772 MUC19Q7Z5P9 8384 aa1.29□□□□□ -2.2
HERC3-213ENST00000598772 A0A1B0GX51 115 aa1.28□□□□□ -2.2
HERC3-213ENST00000598772 H3BQ85 93 aa1.28□□□□□ -2.2
HERC3-213ENST00000598772 KRTAP6-1Q3LI64 71 aa1.28□□□□□ -2.2
HERC3-213ENST00000598772 ATOH7Q8N100 152 aa1.27□□□□□ -2.21
HERC3-213ENST00000598772 HIST1H4GQ99525 98 aa1.27□□□□□ -2.21
HERC3-213ENST00000598772 ACYP1P07311 99 aa1.26□□□□□ -2.21
HERC3-213ENST00000598772 UBE2V1Q13404 147 aa1.26□□□□□ -2.21
HERC3-213ENST00000598772 LINC01545Q5VT33 79 aa1.26□□□□□ -2.21
HERC3-213ENST00000598772 TMEM218A2RU14 115 aa1.25□□□□□ -2.21
HERC3-213ENST00000598772 SNAPINO95295 136 aa1.25□□□□□ -2.21
HERC3-213ENST00000598772 KRTDAPP60985 99 aa1.25□□□□□ -2.21
HERC3-213ENST00000598772 Q8N9L7 120 aa1.25□□□□□ -2.21
HERC3-213ENST00000598772 NAA38Q9BRA0 125 aaKnown RBP1.25□□□□□ -2.21
HERC3-213ENST00000598772 hCG_2014768A0A024R1R8 64 aa1.24□□□□□ -2.21
HERC3-213ENST00000598772 COA6Q5JTJ3 125 aaKnown RBP1.24□□□□□ -2.21
HERC3-213ENST00000598772 LCE3CQ5T5A8 94 aa1.23□□□□□ -2.21
HERC3-213ENST00000598772 CYP4F30PQ9H0H9 118 aa1.23□□□□□ -2.21
HERC3-213ENST00000598772 BPY2O14599 106 aa1.22□□□□□ -2.21
HERC3-213ENST00000598772 TRIAP1O43715 76 aa1.22□□□□□ -2.21
HERC3-213ENST00000598772 MT1AP04731 61 aa1.22□□□□□ -2.21
HERC3-213ENST00000598772 PSMB2P49721 201 aa1.22□□□□□ -2.21
HERC3-213ENST00000598772 CEND1Q8N111 149 aa1.21□□□□□ -2.22
HERC3-213ENST00000598772 BAALC-AS2P0C853 105 aa1.19□□□□□ -2.22
HERC3-213ENST00000598772 PRO1854Q9UHT4 67 aa1.18□□□□□ -2.22
HERC3-213ENST00000598772 TRAV22A0A0B4J277 110 aa1.17□□□□□ -2.22
HERC3-213ENST00000598772 A0A0B4J2C4 111 aa1.17□□□□□ -2.22
HERC3-213ENST00000598772 A0A1B0GW54 56 aa1.17□□□□□ -2.22
HERC3-213ENST00000598772 COX6CP09669 75 aa1.16□□□□□ -2.22
HERC3-213ENST00000598772 KRTAP12-3P60328 96 aa1.16□□□□□ -2.22
HERC3-213ENST00000598772 YPEL4Q96NS1 127 aa1.16□□□□□ -2.22
HERC3-213ENST00000598772 C14orf132Q9NPU4 83 aa1.16□□□□□ -2.22
HERC3-213ENST00000598772 LOC110117498A0A087WWA1 95 aa1.15□□□□□ -2.23
HERC3-213ENST00000598772 HSBP1L1C9JCN9 74 aa1.15□□□□□ -2.23
HERC3-213ENST00000598772 APOC3P02656 99 aa1.15□□□□□ -2.23
HERC3-213ENST00000598772 SCGB1C2P0DMR2 95 aa1.15□□□□□ -2.23
HERC3-213ENST00000598772 TP53AIP1Q9HCN2 124 aa1.15□□□□□ -2.23
HERC3-213ENST00000598772 HIGD1BQ9P298 99 aa1.15□□□□□ -2.23
HERC3-213ENST00000598772 LOC101927531A0A1B0GV80 90 aa1.13□□□□□ -2.23
HERC3-213ENST00000598772 JMJD7-PLA2G4BH0Y9G9 81 aa1.13□□□□□ -2.23
HERC3-213ENST00000598772 LCE3EQ5T5B0 92 aa1.13□□□□□ -2.23
HERC3-213ENST00000598772 SNRPEP62304 92 aaKnown RBP1.12□□□□□ -2.23
HERC3-213ENST00000598772 SPINT4Q6UDR6 99 aa1.12□□□□□ -2.23
HERC3-213ENST00000598772 KRTAP21-2Q3LI59 83 aa1.11□□□□□ -2.23
HERC3-213ENST00000598772 CLLU1Q5K131 121 aa1.11□□□□□ -2.23
HERC3-213ENST00000598772 HIST3H2BBQ8N257 126 aa1.1□□□□□ -2.23
HERC3-213ENST00000598772 HIST1H2BLQ99880 126 aa1.1□□□□□ -2.23
HERC3-213ENST00000598772 K7ERJ3 54 aa1.09□□□□□ -2.23
HERC3-213ENST00000598772 NDUFA5Q16718 116 aa1.09□□□□□ -2.23
HERC3-213ENST00000598772 KRTAP13-4Q3LI77 160 aa1.09□□□□□ -2.23
HERC3-213ENST00000598772 SVBPQ8N300 66 aa1.09□□□□□ -2.23
HERC3-213ENST00000598772 TNP1P09430 55 aa1.08□□□□□ -2.24
HERC3-213ENST00000598772 FXYD2P54710 66 aa1.07□□□□□ -2.24
HERC3-213ENST00000598772 ATXN8Q156A1 80 aa1.06□□□□□ -2.24
HERC3-213ENST00000598772 KRTAP25-1Q3LHN0 102 aa1.06□□□□□ -2.24
HERC3-213ENST00000598772 C14orf144Q96I85 54 aa1.06□□□□□ -2.24
HERC3-213ENST00000598772 SPCS1Q9Y6A9 102 aa1.06□□□□□ -2.24
HERC3-213ENST00000598772 HIST1H2BKO60814 126 aa1.05□□□□□ -2.24
HERC3-213ENST00000598772 HIST1H2BJP06899 126 aa1.05□□□□□ -2.24
HERC3-213ENST00000598772 COX8AP10176 69 aa1.05□□□□□ -2.24
HERC3-213ENST00000598772 HIST1H2BOP23527 126 aa1.05□□□□□ -2.24
HERC3-213ENST00000598772 HIST1H2BBP33778 126 aa1.05□□□□□ -2.24
HERC3-213ENST00000598772 HIST1H2BDP58876 126 aa1.05□□□□□ -2.24
HERC3-213ENST00000598772 HIST1H2BCP62807 126 aa1.05□□□□□ -2.24
HERC3-213ENST00000598772 HIST2H2BEQ16778 126 aa1.05□□□□□ -2.24
HERC3-213ENST00000598772 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.05□□□□□ -2.24
HERC3-213ENST00000598772 HIST1H2BHQ93079 126 aa1.05□□□□□ -2.24
HERC3-213ENST00000598772 HIST1H2BNQ99877 126 aa1.05□□□□□ -2.24
HERC3-213ENST00000598772 HIST1H2BMQ99879 126 aa1.05□□□□□ -2.24
HERC3-213ENST00000598772 TRAV7A0A075B6U4 112 aa1.04□□□□□ -2.24
HERC3-213ENST00000598772 H0Y9P7 68 aa1.04□□□□□ -2.24
HERC3-213ENST00000598772 LINC00208Q96KT6 92 aa1.03□□□□□ -2.24
HERC3-213ENST00000598772 TSTD3H0UI37 97 aa1.01□□□□□ -2.25
HERC3-213ENST00000598772 DLEU1O43261 78 aa1.01□□□□□ -2.25
HERC3-213ENST00000598772 ATOX1O00244 68 aa1□□□□□ -2.25
HERC3-213ENST00000598772 VAMP8Q9BV40 100 aa1□□□□□ -2.25
HERC3-213ENST00000598772 SPTSSBQ8NFR3 76 aa0.99□□□□□ -2.25
HERC3-213ENST00000598772 UBL5Q9BZL1 73 aa0.98□□□□□ -2.25
HERC3-213ENST00000598772 UQCRQO14949 82 aa0.96□□□□□ -2.26
HERC3-213ENST00000598772 KRTAP12-1P59990 96 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms