RNA–Protein interactions for RNA: ENST00000596580.2

FARP1-219, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 13,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-219ENST00000596580 KRTAP3-2Q9BYR7 98 aa3.57□□□□□ -1.84
FARP1-219ENST00000596580 SVEP1Q4LDE5 3571 aa3.56□□□□□ -1.84
FARP1-219ENST00000596580 KRTAP3-3Q9BYR6 98 aa3.55□□□□□ -1.84
FARP1-219ENST00000596580 KRTAP12-3P60328 96 aa3.52□□□□□ -1.85
FARP1-219ENST00000596580 KRTAP10-4P60372 401 aaPredicted RBP3.51□□□□□ -1.85
FARP1-219ENST00000596580 DNAH6Q9C0G6 4158 aa3.51□□□□□ -1.85
FARP1-219ENST00000596580 KRTAP19-4Q3LI73 84 aa3.51□□□□□ -1.85
FARP1-219ENST00000596580 CSMD3Q7Z407 3707 aa3.5□□□□□ -1.85
FARP1-219ENST00000596580 CSMD2Q7Z408 3487 aa3.5□□□□□ -1.85
FARP1-219ENST00000596580 DNAH2Q9P225 4427 aa3.45□□□□□ -1.86
FARP1-219ENST00000596580 FRAS1Q86XX4 4008 aa3.45□□□□□ -1.86
FARP1-219ENST00000596580 DNAH10Q8IVF4 4471 aa3.42□□□□□ -1.86
FARP1-219ENST00000596580 VPS13BQ7Z7G8 4022 aa3.41□□□□□ -1.86
FARP1-219ENST00000596580 KMT2AQ03164 3969 aa3.35□□□□□ -1.87
FARP1-219ENST00000596580 LCE3AQ5TA76 89 aa3.32□□□□□ -1.88
FARP1-219ENST00000596580 DNAH11Q96DT5 4516 aa3.3□□□□□ -1.88
FARP1-219ENST00000596580 KRTAP8-1Q8IUC2 63 aa3.3□□□□□ -1.88
FARP1-219ENST00000596580 FLGP20930 4061 aaPredicted RBP3.28□□□□□ -1.88
FARP1-219ENST00000596580 SPRR2GQ9BYE4 73 aa3.28□□□□□ -1.88
FARP1-219ENST00000596580 PRKDCP78527 4128 aaKnown RBP3.27□□□□□ -1.89
FARP1-219ENST00000596580 DNAH9Q9NYC9 4486 aa3.23□□□□□ -1.89
FARP1-219ENST00000596580 DYNC2H1Q8NCM8 4307 aaKnown RBP3.23□□□□□ -1.89
FARP1-219ENST00000596580 VPS13DQ5THJ4 4388 aa3.22□□□□□ -1.89
FARP1-219ENST00000596580 FAT2Q9NYQ8 4349 aa3.21□□□□□ -1.9
FARP1-219ENST00000596580 KRTAP4-5Q9BYR2 181 aa3.2□□□□□ -1.9
FARP1-219ENST00000596580 CRCT1Q9UGL9 99 aa3.2□□□□□ -1.9
FARP1-219ENST00000596580 DNAH5Q8TE73 4624 aa3.17□□□□□ -1.9
FARP1-219ENST00000596580 RYR1P21817 5038 aa3.16□□□□□ -1.9
FARP1-219ENST00000596580 KRTAP10-5P60370 271 aa3.15□□□□□ -1.91
FARP1-219ENST00000596580 LORP23490 312 aaPredicted RBP3.13□□□□□ -1.91
FARP1-219ENST00000596580 MT1HP80294 61 aa3.13□□□□□ -1.91
FARP1-219ENST00000596580 DNAH17Q9UFH2 4485 aa3.12□□□□□ -1.91
FARP1-219ENST00000596580 KRTAP10-7P60409 375 aaPredicted RBP3.11□□□□□ -1.91
FARP1-219ENST00000596580 PLECQ15149 4684 aaKnown RBP3.11□□□□□ -1.91
FARP1-219ENST00000596580 DYNC1H1Q14204 4646 aaKnown RBP3.11□□□□□ -1.91
FARP1-219ENST00000596580 PKHD1P08F94 4074 aa3.1□□□□□ -1.91
FARP1-219ENST00000596580 STARD9Q9P2P6 4700 aa3.09□□□□□ -1.91
FARP1-219ENST00000596580 LCE3CQ5T5A8 94 aa3.08□□□□□ -1.92
FARP1-219ENST00000596580 MT2AP02795 61 aa3.07□□□□□ -1.92
FARP1-219ENST00000596580 PKHD1L1Q86WI1 4243 aa3.07□□□□□ -1.92
FARP1-219ENST00000596580 LRP1Q07954 4544 aaKnown RBP3.06□□□□□ -1.92
FARP1-219ENST00000596580 DNAH8Q96JB1 4490 aa3.05□□□□□ -1.92
FARP1-219ENST00000596580 KRTAP19-8Q3LI54 63 aa3□□□□□ -1.93
FARP1-219ENST00000596580 KRTAP19-5Q3LI72 72 aa3□□□□□ -1.93
FARP1-219ENST00000596580 KRTAP4-1Q9BYQ7 146 aa2.99□□□□□ -1.93
FARP1-219ENST00000596580 SPRR2FQ96RM1 72 aa2.98□□□□□ -1.93
FARP1-219ENST00000596580 MT1FP04733 61 aa2.97□□□□□ -1.93
FARP1-219ENST00000596580 LRP1BQ9NZR2 4599 aa2.94□□□□□ -1.94
FARP1-219ENST00000596580 SACSQ9NZJ4 4579 aa2.94□□□□□ -1.94
FARP1-219ENST00000596580 PKD1P98161 4303 aa2.94□□□□□ -1.94
FARP1-219ENST00000596580 APOBP04114 4563 aaKnown RBP2.92□□□□□ -1.94
FARP1-219ENST00000596580 RYR3Q15413 4870 aa2.91□□□□□ -1.94
FARP1-219ENST00000596580 PCLOQ9Y6V0 5065 aa2.87□□□□□ -1.95
FARP1-219ENST00000596580 DNHD1Q96M86 4753 aa2.87□□□□□ -1.95
FARP1-219ENST00000596580 SPRR5A0A1B0GTR4 108 aa2.86□□□□□ -1.95
FARP1-219ENST00000596580 KRTAP12-4P60329 112 aa2.85□□□□□ -1.95
FARP1-219ENST00000596580 KRTAP19-1Q8IUB9 90 aa2.85□□□□□ -1.95
FARP1-219ENST00000596580 HSPG2P98160 4391 aa2.85□□□□□ -1.95
FARP1-219ENST00000596580 MT1GP13640 62 aa2.84□□□□□ -1.95
FARP1-219ENST00000596580 MT1XP80297 61 aa2.82□□□□□ -1.96
FARP1-219ENST00000596580 FAT3Q8TDW7 4589 aa2.8□□□□□ -1.96
FARP1-219ENST00000596580 FAT1Q14517 4588 aa2.8□□□□□ -1.96
FARP1-219ENST00000596580 RYR2Q92736 4967 aa2.79□□□□□ -1.96
FARP1-219ENST00000596580 LCE2BO14633 110 aa2.78□□□□□ -1.96
FARP1-219ENST00000596580 SPRR2EP22531 72 aa2.77□□□□□ -1.97
FARP1-219ENST00000596580 SPRR2BP35325 72 aa2.77□□□□□ -1.97
FARP1-219ENST00000596580 SPRR2AP35326 72 aa2.77□□□□□ -1.97
FARP1-219ENST00000596580 TNXBP22105 4242 aa2.77□□□□□ -1.97
FARP1-219ENST00000596580 MYCBP2O75592 4640 aa2.77□□□□□ -1.97
FARP1-219ENST00000596580 SPRR2DP22532 72 aa2.73□□□□□ -1.97
FARP1-219ENST00000596580 KRTAP9-8Q9BYQ0 159 aa2.72□□□□□ -1.97
FARP1-219ENST00000596580 MT1BP07438 61 aa2.72□□□□□ -1.97
FARP1-219ENST00000596580 LCE3DQ9BYE3 92 aa2.71□□□□□ -1.98
FARP1-219ENST00000596580 LCE3BQ5TA77 95 aa2.7□□□□□ -1.98
FARP1-219ENST00000596580 MT1LQ93083 61 aa2.7□□□□□ -1.98
FARP1-219ENST00000596580 KRTAP9-3Q9BYQ3 159 aa2.68□□□□□ -1.98
FARP1-219ENST00000596580 LCE3EQ5T5B0 92 aa2.68□□□□□ -1.98
FARP1-219ENST00000596580 KRTAP19-3Q7Z4W3 81 aa2.67□□□□□ -1.98
FARP1-219ENST00000596580 HYDINQ4G0P3 5121 aa2.63□□□□□ -1.99
FARP1-219ENST00000596580 MT1EP04732 61 aa2.59□□□□□ -1.99
FARP1-219ENST00000596580 LCE2CQ5TA81 110 aa2.59□□□□□ -1.99
FARP1-219ENST00000596580 KIAA1109Q2LD37 5005 aa2.58□□□□□ -2
FARP1-219ENST00000596580 LRP2P98164 4655 aa2.57□□□□□ -2
FARP1-219ENST00000596580 HERC2O95714 4834 aa2.56□□□□□ -2
FARP1-219ENST00000596580 MT3P25713 68 aa2.55□□□□□ -2
FARP1-219ENST00000596580 HERC1Q15751 4861 aa2.54□□□□□ -2
FARP1-219ENST00000596580 KRTAP19-6Q3LI70 58 aa2.53□□□□□ -2
FARP1-219ENST00000596580 KMT2CQ8NEZ4 4911 aaKnown RBP2.52□□□□□ -2.01
FARP1-219ENST00000596580 MUC17Q685J3 4493 aa2.51□□□□□ -2.01
FARP1-219ENST00000596580 BIRC6Q9NR09 4857 aa2.51□□□□□ -2.01
FARP1-219ENST00000596580 MT1MQ8N339 61 aa2.5□□□□□ -2.01
FARP1-219ENST00000596580 EPPK1P58107 5090 aaKnown RBP2.5□□□□□ -2.01
FARP1-219ENST00000596580 KRTAP4-8A0A0G2JLE6 195 aa2.5□□□□□ -2.01
FARP1-219ENST00000596580 KRTAP4-8Q9BYQ9 185 aa2.5□□□□□ -2.01
FARP1-219ENST00000596580 KRTAP19-2Q3LHN2 52 aa2.49□□□□□ -2.01
FARP1-219ENST00000596580 LCE2DQ5TA82 110 aaPredicted RBP2.48□□□□□ -2.01
FARP1-219ENST00000596580 RNF213Q63HN8 5207 aa2.45□□□□□ -2.02
FARP1-219ENST00000596580 KRTAP17-1Q9BYP8 105 aa2.4□□□□□ -2.03
FARP1-219ENST00000596580 LCE1AQ5T7P2 110 aa2.39□□□□□ -2.03
FARP1-219ENST00000596580 MT1AP04731 61 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms