RNA–Protein interactions for RNA: ENST00000593891.1

ZNF558-202, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 292 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-202ENST00000593891 NREPQ16612 68 aa3.89□□□□□ -1.79
ZNF558-202ENST00000593891 NDUFA5Q16718 116 aa3.88□□□□□ -1.79
ZNF558-202ENST00000593891 CASC2Q6XLA1 102 aa3.88□□□□□ -1.79
ZNF558-202ENST00000593891 SNAPINO95295 136 aa3.87□□□□□ -1.79
ZNF558-202ENST00000593891 KRTDAPP60985 99 aa3.87□□□□□ -1.79
ZNF558-202ENST00000593891 A0A0B4J2C4 111 aa3.86□□□□□ -1.79
ZNF558-202ENST00000593891 NAA38Q9BRA0 125 aaKnown RBP3.86□□□□□ -1.79
ZNF558-202ENST00000593891 TMEM238LA0A1B0GVL6 79 aa3.85□□□□□ -1.79
ZNF558-202ENST00000593891 A6NJY4 79 aa3.85□□□□□ -1.79
ZNF558-202ENST00000593891 SNRPEP62304 92 aaKnown RBP3.85□□□□□ -1.79
ZNF558-202ENST00000593891 COA6Q5JTJ3 125 aaKnown RBP3.85□□□□□ -1.79
ZNF558-202ENST00000593891 TRIAP1O43715 76 aa3.83□□□□□ -1.8
ZNF558-202ENST00000593891 APOC3P02656 99 aa3.83□□□□□ -1.8
ZNF558-202ENST00000593891 MT-ATP8P03928 68 aa3.83□□□□□ -1.8
ZNF558-202ENST00000593891 A0A1W2PPM0 123 aa3.82□□□□□ -1.8
ZNF558-202ENST00000593891 SVBPQ8N300 66 aa3.8□□□□□ -1.8
ZNF558-202ENST00000593891 A0A0D9SG42 100 aa3.79□□□□□ -1.8
ZNF558-202ENST00000593891 S100A1P23297 94 aa3.79□□□□□ -1.8
ZNF558-202ENST00000593891 PRO1854Q9UHT4 67 aa3.78□□□□□ -1.8
ZNF558-202ENST00000593891 HSBP1L1C9JCN9 74 aa3.73□□□□□ -1.81
ZNF558-202ENST00000593891 PSMB2P49721 201 aa3.73□□□□□ -1.81
ZNF558-202ENST00000593891 CEND1Q8N111 149 aa3.73□□□□□ -1.81
ZNF558-202ENST00000593891 LOC110117498A0A087WWA1 95 aa3.72□□□□□ -1.81
ZNF558-202ENST00000593891 BPY2O14599 106 aa3.72□□□□□ -1.81
ZNF558-202ENST00000593891 COX6CP09669 75 aa3.72□□□□□ -1.81
ZNF558-202ENST00000593891 CAMK2N1Q7Z7J9 78 aa3.72□□□□□ -1.81
ZNF558-202ENST00000593891 CYP4F30PQ9H0H9 118 aa3.72□□□□□ -1.81
ZNF558-202ENST00000593891 K7EP34 96 aa3.71□□□□□ -1.82
ZNF558-202ENST00000593891 ACYP1P07311 99 aa3.71□□□□□ -1.82
ZNF558-202ENST00000593891 JMJD7-PLA2G4BH0Y9G9 81 aa3.68□□□□□ -1.82
ZNF558-202ENST00000593891 BAALC-AS2P0C853 105 aa3.68□□□□□ -1.82
ZNF558-202ENST00000593891 Q8N9L7 120 aa3.68□□□□□ -1.82
ZNF558-202ENST00000593891 HIST3H2BBQ8N257 126 aa3.67□□□□□ -1.82
ZNF558-202ENST00000593891 HIST1H2BKO60814 126 aa3.64□□□□□ -1.83
ZNF558-202ENST00000593891 HIST1H2BJP06899 126 aa3.64□□□□□ -1.83
ZNF558-202ENST00000593891 HIST1H2BOP23527 126 aa3.64□□□□□ -1.83
ZNF558-202ENST00000593891 HIST1H2BBP33778 126 aa3.64□□□□□ -1.83
ZNF558-202ENST00000593891 HIST1H2BDP58876 126 aa3.64□□□□□ -1.83
ZNF558-202ENST00000593891 HIST1H2BCP62807 126 aa3.64□□□□□ -1.83
ZNF558-202ENST00000593891 HIST2H2BEQ16778 126 aa3.64□□□□□ -1.83
ZNF558-202ENST00000593891 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.64□□□□□ -1.83
ZNF558-202ENST00000593891 KRTAP5-1Q6L8H4 278 aa3.64□□□□□ -1.83
ZNF558-202ENST00000593891 HIST1H2BHQ93079 126 aa3.64□□□□□ -1.83
ZNF558-202ENST00000593891 HIST1H2BNQ99877 126 aa3.64□□□□□ -1.83
ZNF558-202ENST00000593891 HIST1H2BMQ99879 126 aa3.64□□□□□ -1.83
ZNF558-202ENST00000593891 KRTAP9-4Q9BYQ2 154 aa3.64□□□□□ -1.83
ZNF558-202ENST00000593891 TP53AIP1Q9HCN2 124 aa3.64□□□□□ -1.83
ZNF558-202ENST00000593891 S100A6P06703 90 aa3.62□□□□□ -1.83
ZNF558-202ENST00000593891 HIST1H2BLQ99880 126 aa3.62□□□□□ -1.83
ZNF558-202ENST00000593891 C14orf132Q9NPU4 83 aa3.6□□□□□ -1.83
ZNF558-202ENST00000593891 TMA7Q9Y2S6 64 aaKnown RBP3.6□□□□□ -1.83
ZNF558-202ENST00000593891 TRAV22A0A0B4J277 110 aa3.58□□□□□ -1.84
ZNF558-202ENST00000593891 S100A2P29034 98 aa3.58□□□□□ -1.84
ZNF558-202ENST00000593891 HIGD1BQ9P298 99 aa3.58□□□□□ -1.84
ZNF558-202ENST00000593891 COX8AP10176 69 aa3.57□□□□□ -1.84
ZNF558-202ENST00000593891 DLEU1O43261 78 aa3.55□□□□□ -1.84
ZNF558-202ENST00000593891 LCE3AQ5TA76 89 aa3.55□□□□□ -1.84
ZNF558-202ENST00000593891 C10orf95Q9H7T3 257 aa3.55□□□□□ -1.84
ZNF558-202ENST00000593891 LOC101927531A0A1B0GV80 90 aa3.54□□□□□ -1.84
ZNF558-202ENST00000593891 SCGB1C2P0DMR2 95 aa3.53□□□□□ -1.84
ZNF558-202ENST00000593891 FXYD2P54710 66 aa3.5□□□□□ -1.85
ZNF558-202ENST00000593891 KRTAP6-2Q3LI66 62 aa3.49□□□□□ -1.85
ZNF558-202ENST00000593891 K7ERJ3 54 aa3.47□□□□□ -1.85
ZNF558-202ENST00000593891 SMIM6P0DI80 62 aa3.44□□□□□ -1.86
ZNF558-202ENST00000593891 C14orf144Q96I85 54 aa3.44□□□□□ -1.86
ZNF558-202ENST00000593891 ATXN8Q156A1 80 aa3.43□□□□□ -1.86
ZNF558-202ENST00000593891 KRTAP6-1Q3LI64 71 aa3.43□□□□□ -1.86
ZNF558-202ENST00000593891 VAMP8Q9BV40 100 aa3.43□□□□□ -1.86
ZNF558-202ENST00000593891 LOC105371267A0A1B0GV96 52 aa3.42□□□□□ -1.86
ZNF558-202ENST00000593891 PYY3Q5JQD4 70 aa3.41□□□□□ -1.86
ZNF558-202ENST00000593891 TSTD3H0UI37 97 aa3.4□□□□□ -1.87
ZNF558-202ENST00000593891 MT1AP04731 61 aa3.4□□□□□ -1.87
ZNF558-202ENST00000593891 SPATA45Q537H7 98 aa3.4□□□□□ -1.87
ZNF558-202ENST00000593891 UQCR10Q9UDW1 63 aa3.37□□□□□ -1.87
ZNF558-202ENST00000593891 KRTAP4-2Q9BYR5 136 aa3.34□□□□□ -1.87
ZNF558-202ENST00000593891 PCP4L1A6NKN8 68 aa3.32□□□□□ -1.88
ZNF558-202ENST00000593891 M0R143 59 aa3.32□□□□□ -1.88
ZNF558-202ENST00000593891 HSD52Q0P140 79 aa3.31□□□□□ -1.88
ZNF558-202ENST00000593891 KRTAP12-3P60328 96 aa3.29□□□□□ -1.88
ZNF558-202ENST00000593891 ATOX1O00244 68 aa3.26□□□□□ -1.89
ZNF558-202ENST00000593891 COL5A1-AS1Q5SY13 56 aa3.25□□□□□ -1.89
ZNF558-202ENST00000593891 SPCS1Q9Y6A9 102 aa3.24□□□□□ -1.89
ZNF558-202ENST00000593891 H0Y9P7 68 aa3.22□□□□□ -1.89
ZNF558-202ENST00000593891 KRTAP13-4Q3LI77 160 aa3.22□□□□□ -1.89
ZNF558-202ENST00000593891 UBL5Q9BZL1 73 aa3.21□□□□□ -1.9
ZNF558-202ENST00000593891 MT3P25713 68 aa3.19□□□□□ -1.9
ZNF558-202ENST00000593891 C9orf118A6NHY6 69 aa3.18□□□□□ -1.9
ZNF558-202ENST00000593891 GTF2H5Q6ZYL4 71 aa3.18□□□□□ -1.9
ZNF558-202ENST00000593891 PHGR1C9JFL3 82 aa3.17□□□□□ -1.9
ZNF558-202ENST00000593891 TAX1BP3O14907 124 aa3.17□□□□□ -1.9
ZNF558-202ENST00000593891 LCE1EQ5T753 118 aa3.16□□□□□ -1.9
ZNF558-202ENST00000593891 UQCRQO14949 82 aa3.15□□□□□ -1.91
ZNF558-202ENST00000593891 TNP1P09430 55 aa3.15□□□□□ -1.91
ZNF558-202ENST00000593891 KRTAP4-12Q9BQ66 201 aa3.15□□□□□ -1.91
ZNF558-202ENST00000593891 SPINT4Q6UDR6 99 aa3.13□□□□□ -1.91
ZNF558-202ENST00000593891 LINC00208Q96KT6 92 aa3.13□□□□□ -1.91
ZNF558-202ENST00000593891 DMAC1Q96GE9 116 aa3.12□□□□□ -1.91
ZNF558-202ENST00000593891 A0A1B0GV90 55 aa3.11□□□□□ -1.91
ZNF558-202ENST00000593891 SPTSSBQ8NFR3 76 aa3.11□□□□□ -1.91
ZNF558-202ENST00000593891 F8W1H4 67 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms