RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 INE1O15225 51 aa3.07□□□□□ -1.92
VMP1-215ENST00000592619 IGKV4-1P06312 121 aa3.07□□□□□ -1.92
VMP1-215ENST00000592619 PLNP26678 52 aa3.07□□□□□ -1.92
VMP1-215ENST00000592619 WFDC10BQ8IUB3 73 aa3.07□□□□□ -1.92
VMP1-215ENST00000592619 Q96NJ1 140 aa3.07□□□□□ -1.92
VMP1-215ENST00000592619 PKHD1P08F94 4074 aa3.07□□□□□ -1.92
VMP1-215ENST00000592619 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.06□□□□□ -1.92
VMP1-215ENST00000592619 K7EMI3 77 aa3.06□□□□□ -1.92
VMP1-215ENST00000592619 M0R2N4 97 aa3.06□□□□□ -1.92
VMP1-215ENST00000592619 PP632Q6XCG6 107 aa3.05□□□□□ -1.92
VMP1-215ENST00000592619 LINC01546A6NGU7 62 aa3.04□□□□□ -1.92
VMP1-215ENST00000592619 KRTAP5-5Q701N2 237 aaPredicted RBP3.04□□□□□ -1.92
VMP1-215ENST00000592619 RPL39LQ96EH5 51 aaKnown RBP3.04□□□□□ -1.92
VMP1-215ENST00000592619 ZNF625Q96I27 306 aaPredicted RBP3.04□□□□□ -1.92
VMP1-215ENST00000592619 LRP1BQ9NZR2 4599 aa3.04□□□□□ -1.92
VMP1-215ENST00000592619 RYR1P21817 5038 aa3.03□□□□□ -1.92
VMP1-215ENST00000592619 I3L3M4 83 aa3.03□□□□□ -1.92
VMP1-215ENST00000592619 POLR2KP53803 58 aaKnown RBP3.03□□□□□ -1.92
VMP1-215ENST00000592619 Q6ZRN7 208 aaPredicted RBP3.03□□□□□ -1.92
VMP1-215ENST00000592619 APOBP04114 4563 aaKnown RBP3.03□□□□□ -1.92
VMP1-215ENST00000592619 HERC2O95714 4834 aa3.02□□□□□ -1.93
VMP1-215ENST00000592619 IGIPA6NJ69 53 aa3.02□□□□□ -1.93
VMP1-215ENST00000592619 DNAH8Q96JB1 4490 aa3.01□□□□□ -1.93
VMP1-215ENST00000592619 KIAA1109Q2LD37 5005 aa3.01□□□□□ -1.93
VMP1-215ENST00000592619 LINC00959A0A1B0GUT2 108 aa3.01□□□□□ -1.93
VMP1-215ENST00000592619 ANGP03950 147 aaKnown RBP3.01□□□□□ -1.93
VMP1-215ENST00000592619 SMIM2Q9BVW6 85 aa3.01□□□□□ -1.93
VMP1-215ENST00000592619 DEFB104AQ8WTQ1 72 aa2.99□□□□□ -1.93
VMP1-215ENST00000592619 HSPG2P98160 4391 aa2.98□□□□□ -1.93
VMP1-215ENST00000592619 CLPSL2Q6UWE3 100 aa2.98□□□□□ -1.93
VMP1-215ENST00000592619 ACYP2P14621 99 aa2.96□□□□□ -1.94
VMP1-215ENST00000592619 RPL39P62891 51 aaKnown RBP2.96□□□□□ -1.94
VMP1-215ENST00000592619 COA5Q86WW8 74 aa2.96□□□□□ -1.94
VMP1-215ENST00000592619 ABCA13Q86UQ4 5058 aa2.95□□□□□ -1.94
VMP1-215ENST00000592619 FAT1Q14517 4588 aa2.94□□□□□ -1.94
VMP1-215ENST00000592619 GVQW2A0A096LPI5 108 aaPredicted RBP2.94□□□□□ -1.94
VMP1-215ENST00000592619 A0A1B0GU69 56 aa2.94□□□□□ -1.94
VMP1-215ENST00000592619 KCNQ1DNQ9H478 68 aa2.94□□□□□ -1.94
VMP1-215ENST00000592619 PCLOQ9Y6V0 5065 aa2.94□□□□□ -1.94
VMP1-215ENST00000592619 COX7BP24311 80 aa2.93□□□□□ -1.94
VMP1-215ENST00000592619 KRTAP10-1P60331 282 aa2.92□□□□□ -1.94
VMP1-215ENST00000592619 Q6ZSA8 131 aa2.92□□□□□ -1.94
VMP1-215ENST00000592619 NCR3O14931 201 aa2.91□□□□□ -1.94
VMP1-215ENST00000592619 LCE1CQ5T751 118 aa2.91□□□□□ -1.94
VMP1-215ENST00000592619 LCE1BQ5T7P3 118 aa2.91□□□□□ -1.94
VMP1-215ENST00000592619 Q6ZQY7 126 aa2.91□□□□□ -1.94
VMP1-215ENST00000592619 ETDCA0A1B0GVM5 59 aa2.9□□□□□ -1.95
VMP1-215ENST00000592619 H0YGX0 51 aa2.9□□□□□ -1.95
VMP1-215ENST00000592619 Q8IZM0 81 aa2.9□□□□□ -1.95
VMP1-215ENST00000592619 VPS13BQ7Z7G8 4022 aa2.9□□□□□ -1.95
VMP1-215ENST00000592619 NDUFA1O15239 70 aa2.89□□□□□ -1.95
VMP1-215ENST00000592619 COX6A2Q02221 97 aa2.89□□□□□ -1.95
VMP1-215ENST00000592619 CDKN2A-AS1Q9UH64 79 aa2.89□□□□□ -1.95
VMP1-215ENST00000592619 A0A096LNI7 61 aa2.87□□□□□ -1.95
VMP1-215ENST00000592619 PLAC4Q8WY50 150 aa2.87□□□□□ -1.95
VMP1-215ENST00000592619 C6orf48Q9UBA6 75 aa2.87□□□□□ -1.95
VMP1-215ENST00000592619 PKHD1L1Q86WI1 4243 aa2.87□□□□□ -1.95
VMP1-215ENST00000592619 HAMPP81172 84 aa2.86□□□□□ -1.95
VMP1-215ENST00000592619 Q5VSD8 79 aa2.86□□□□□ -1.95
VMP1-215ENST00000592619 UNQ6190/PRO20217Q6UXQ8 127 aa2.86□□□□□ -1.95
VMP1-215ENST00000592619 Q6ZRX8 168 aa2.86□□□□□ -1.95
VMP1-215ENST00000592619 TOMM7Q9P0U1 55 aa2.86□□□□□ -1.95
VMP1-215ENST00000592619 SMIM11BQ8TCY0 68 aa2.85□□□□□ -1.95
VMP1-215ENST00000592619 FAT3Q8TDW7 4589 aa2.85□□□□□ -1.95
VMP1-215ENST00000592619 MYCBP2O75592 4640 aa2.84□□□□□ -1.95
VMP1-215ENST00000592619 SMR3BP02814 79 aaPredicted RBP2.84□□□□□ -1.95
VMP1-215ENST00000592619 KRTAP10-4P60372 401 aaPredicted RBP2.82□□□□□ -1.96
VMP1-215ENST00000592619 SRRM2Q9UQ35 2752 aaKnown RBP2.81□□□□□ -1.96
VMP1-215ENST00000592619 KRTAP6-3Q3LI67 103 aa2.81□□□□□ -1.96
VMP1-215ENST00000592619 LRP1Q07954 4544 aaKnown RBP2.8□□□□□ -1.96
VMP1-215ENST00000592619 HERC1Q15751 4861 aa2.8□□□□□ -1.96
VMP1-215ENST00000592619 SSBP3-AS1Q7Z2R9 100 aa2.8□□□□□ -1.96
VMP1-215ENST00000592619 LINC00158P58513 81 aa2.79□□□□□ -1.96
VMP1-215ENST00000592619 SPINK6Q6UWN8 80 aa2.78□□□□□ -1.96
VMP1-215ENST00000592619 TNXBP22105 4242 aa2.77□□□□□ -1.97
VMP1-215ENST00000592619 HMCN2Q8NDA2 5059 aa2.76□□□□□ -1.97
VMP1-215ENST00000592619 LINC00308Q8TCZ7 52 aa2.74□□□□□ -1.97
VMP1-215ENST00000592619 SPRR1AP35321 89 aa2.73□□□□□ -1.97
VMP1-215ENST00000592619 KRTAP13-1Q8IUC0 172 aa2.73□□□□□ -1.97
VMP1-215ENST00000592619 MT1HL1P0DM35 61 aa2.71□□□□□ -1.98
VMP1-215ENST00000592619 PRLHP81277 87 aa2.71□□□□□ -1.98
VMP1-215ENST00000592619 LINC00575Q6W349 94 aa2.71□□□□□ -1.98
VMP1-215ENST00000592619 RPL37P61927 97 aaKnown RBP2.7□□□□□ -1.98
VMP1-215ENST00000592619 FLG2Q5D862 2391 aaPredicted RBP2.69□□□□□ -1.98
VMP1-215ENST00000592619 DMBT1Q9UGM3 2413 aaPredicted RBP2.68□□□□□ -1.98
VMP1-215ENST00000592619 KRTAP13-4Q3LI77 160 aa2.65□□□□□ -1.99
VMP1-215ENST00000592619 SPRR1BP22528 89 aa2.64□□□□□ -1.99
VMP1-215ENST00000592619 CRIPTQ9P021 101 aa2.64□□□□□ -1.99
VMP1-215ENST00000592619 LRP2P98164 4655 aa2.64□□□□□ -1.99
VMP1-215ENST00000592619 UBR4Q5T4S7 5183 aa2.64□□□□□ -1.99
VMP1-215ENST00000592619 IGLV5-48A0A075B6I7 105 aa2.63□□□□□ -1.99
VMP1-215ENST00000592619 COX6B2Q6YFQ2 88 aa2.63□□□□□ -1.99
VMP1-215ENST00000592619 RPS29P62273 56 aaKnown RBP2.62□□□□□ -1.99
VMP1-215ENST00000592619 LPAP08519 4548 aa2.62□□□□□ -1.99
VMP1-215ENST00000592619 SPINK1P00995 79 aa2.61□□□□□ -1.99
VMP1-215ENST00000592619 KRTAP12-3P60328 96 aa2.61□□□□□ -1.99
VMP1-215ENST00000592619 K7EQZ3 153 aa2.6□□□□□ -1.99
VMP1-215ENST00000592619 DEFB105AQ8NG35 78 aa2.6□□□□□ -1.99
VMP1-215ENST00000592619 PCOTHQ58A44 107 aa2.58□□□□□ -2
VMP1-215ENST00000592619 MRPL34Q9BQ48 92 aaKnown RBP2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms