RNA–Protein interactions for RNA: ENST00000587303.5

PTPRS-204, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRS, Length 6,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-204ENST00000587303 LORP23490 312 aaPredicted RBP5.92□□□□□ -1.46
PTPRS-204ENST00000587303 LCE3AQ5TA76 89 aa5.92□□□□□ -1.46
PTPRS-204ENST00000587303 KRTAP8-1Q8IUC2 63 aa5.91□□□□□ -1.46
PTPRS-204ENST00000587303 KRTAP10-4P60372 401 aaPredicted RBP5.89□□□□□ -1.47
PTPRS-204ENST00000587303 ZNF469Q96JG9 3925 aaPredicted RBP5.87□□□□□ -1.47
PTPRS-204ENST00000587303 DNAH9Q9NYC9 4486 aa5.8□□□□□ -1.48
PTPRS-204ENST00000587303 DNAH1Q9P2D7 4330 aa5.72□□□□□ -1.49
PTPRS-204ENST00000587303 DNAH10Q8IVF4 4471 aa5.64□□□□□ -1.51
PTPRS-204ENST00000587303 KRTAP23-1A1A580 65 aa5.62□□□□□ -1.51
PTPRS-204ENST00000587303 DNAH5Q8TE73 4624 aa5.57□□□□□ -1.52
PTPRS-204ENST00000587303 KRTAP4-1Q9BYQ7 146 aa5.57□□□□□ -1.52
PTPRS-204ENST00000587303 MT1HP80294 61 aa5.57□□□□□ -1.52
PTPRS-204ENST00000587303 PLECQ15149 4684 aaKnown RBP5.56□□□□□ -1.52
PTPRS-204ENST00000587303 SPRR2FQ96RM1 72 aa5.53□□□□□ -1.52
PTPRS-204ENST00000587303 DNAH2Q9P225 4427 aa5.53□□□□□ -1.52
PTPRS-204ENST00000587303 DNAH3Q8TD57 4116 aa5.49□□□□□ -1.53
PTPRS-204ENST00000587303 KRTAP10-7P60409 375 aaPredicted RBP5.47□□□□□ -1.53
PTPRS-204ENST00000587303 ANK2Q01484 3957 aa5.46□□□□□ -1.54
PTPRS-204ENST00000587303 DNAH11Q96DT5 4516 aa5.46□□□□□ -1.54
PTPRS-204ENST00000587303 MT2AP02795 61 aa5.43□□□□□ -1.54
PTPRS-204ENST00000587303 FRAS1Q86XX4 4008 aa5.39□□□□□ -1.55
PTPRS-204ENST00000587303 KMT2AQ03164 3969 aa5.38□□□□□ -1.55
PTPRS-204ENST00000587303 STARD9Q9P2P6 4700 aa5.38□□□□□ -1.55
PTPRS-204ENST00000587303 DNAH17Q9UFH2 4485 aa5.38□□□□□ -1.55
PTPRS-204ENST00000587303 VPS13DQ5THJ4 4388 aa5.38□□□□□ -1.55
PTPRS-204ENST00000587303 FAT2Q9NYQ8 4349 aa5.38□□□□□ -1.55
PTPRS-204ENST00000587303 LRP1BQ9NZR2 4599 aa5.34□□□□□ -1.55
PTPRS-204ENST00000587303 DNAH8Q96JB1 4490 aa5.33□□□□□ -1.56
PTPRS-204ENST00000587303 VPS13BQ7Z7G8 4022 aa5.31□□□□□ -1.56
PTPRS-204ENST00000587303 MT1FP04733 61 aa5.3□□□□□ -1.56
PTPRS-204ENST00000587303 KRTAP19-5Q3LI72 72 aa5.28□□□□□ -1.56
PTPRS-204ENST00000587303 SPRR2GQ9BYE4 73 aa5.28□□□□□ -1.56
PTPRS-204ENST00000587303 CMYA5Q8N3K9 4069 aa5.27□□□□□ -1.57
PTPRS-204ENST00000587303 SPRR2EP22531 72 aa5.26□□□□□ -1.57
PTPRS-204ENST00000587303 SPRR2BP35325 72 aa5.26□□□□□ -1.57
PTPRS-204ENST00000587303 SPRR2AP35326 72 aa5.26□□□□□ -1.57
PTPRS-204ENST00000587303 DYNC2H1Q8NCM8 4307 aaKnown RBP5.26□□□□□ -1.57
PTPRS-204ENST00000587303 FAT1Q14517 4588 aa5.25□□□□□ -1.57
PTPRS-204ENST00000587303 DYNC1H1Q14204 4646 aaKnown RBP5.25□□□□□ -1.57
PTPRS-204ENST00000587303 PRKDCP78527 4128 aaKnown RBP5.23□□□□□ -1.57
PTPRS-204ENST00000587303 SACSQ9NZJ4 4579 aa5.21□□□□□ -1.58
PTPRS-204ENST00000587303 LYSTQ99698 3801 aa5.2□□□□□ -1.58
PTPRS-204ENST00000587303 DNHD1Q96M86 4753 aa5.2□□□□□ -1.58
PTPRS-204ENST00000587303 DNAH7Q8WXX0 4024 aa5.17□□□□□ -1.58
PTPRS-204ENST00000587303 LCE3CQ5T5A8 94 aa5.12□□□□□ -1.59
PTPRS-204ENST00000587303 LCE3BQ5TA77 95 aa5.1□□□□□ -1.59
PTPRS-204ENST00000587303 SPRR2DP22532 72 aa5.1□□□□□ -1.59
PTPRS-204ENST00000587303 KRTAP17-1Q9BYP8 105 aa5.09□□□□□ -1.59
PTPRS-204ENST00000587303 RYR1P21817 5038 aa5.07□□□□□ -1.6
PTPRS-204ENST00000587303 DNAH6Q9C0G6 4158 aa5.06□□□□□ -1.6
PTPRS-204ENST00000587303 APOBP04114 4563 aaKnown RBP5.05□□□□□ -1.6
PTPRS-204ENST00000587303 LCE2BO14633 110 aa5□□□□□ -1.61
PTPRS-204ENST00000587303 HECTD4Q9Y4D8 3996 aa4.97□□□□□ -1.61
PTPRS-204ENST00000587303 MT1GP13640 62 aa4.93□□□□□ -1.62
PTPRS-204ENST00000587303 KRTAP12-4P60329 112 aa4.92□□□□□ -1.62
PTPRS-204ENST00000587303 KRTAP19-4Q3LI73 84 aa4.91□□□□□ -1.62
PTPRS-204ENST00000587303 FAT3Q8TDW7 4589 aa4.88□□□□□ -1.63
PTPRS-204ENST00000587303 RYR3Q15413 4870 aa4.86□□□□□ -1.63
PTPRS-204ENST00000587303 MYCBP2O75592 4640 aa4.84□□□□□ -1.63
PTPRS-204ENST00000587303 KRTAP19-8Q3LI54 63 aa4.84□□□□□ -1.63
PTPRS-204ENST00000587303 LPAP08519 4548 aa4.83□□□□□ -1.64
PTPRS-204ENST00000587303 LRP1Q07954 4544 aaKnown RBP4.82□□□□□ -1.64
PTPRS-204ENST00000587303 KRTAP4-8A0A0G2JLE6 195 aa4.81□□□□□ -1.64
PTPRS-204ENST00000587303 KRTAP4-8Q9BYQ9 185 aa4.81□□□□□ -1.64
PTPRS-204ENST00000587303 KRTAP19-1Q8IUB9 90 aa4.8□□□□□ -1.64
PTPRS-204ENST00000587303 HSPG2P98160 4391 aa4.78□□□□□ -1.64
PTPRS-204ENST00000587303 MT1XP80297 61 aa4.78□□□□□ -1.64
PTPRS-204ENST00000587303 LCE2CQ5TA81 110 aa4.71□□□□□ -1.65
PTPRS-204ENST00000587303 MT1BP07438 61 aa4.7□□□□□ -1.66
PTPRS-204ENST00000587303 KRTAP9-8Q9BYQ0 159 aa4.68□□□□□ -1.66
PTPRS-204ENST00000587303 LCE2DQ5TA82 110 aaPredicted RBP4.68□□□□□ -1.66
PTPRS-204ENST00000587303 PKHD1P08F94 4074 aa4.66□□□□□ -1.66
PTPRS-204ENST00000587303 HYDINQ4G0P3 5121 aa4.66□□□□□ -1.66
PTPRS-204ENST00000587303 PKD1P98161 4303 aa4.65□□□□□ -1.67
PTPRS-204ENST00000587303 LCE3DQ9BYE3 92 aa4.63□□□□□ -1.67
PTPRS-204ENST00000587303 PKHD1L1Q86WI1 4243 aa4.62□□□□□ -1.67
PTPRS-204ENST00000587303 KRTAP9-3Q9BYQ3 159 aa4.61□□□□□ -1.67
PTPRS-204ENST00000587303 KRTAP9-2Q9BYQ4 174 aa4.58□□□□□ -1.68
PTPRS-204ENST00000587303 KRTAP4-7Q9BYR0 210 aa4.57□□□□□ -1.68
PTPRS-204ENST00000587303 MT4P47944 62 aa4.55□□□□□ -1.68
PTPRS-204ENST00000587303 TNXBP22105 4242 aa4.54□□□□□ -1.68
PTPRS-204ENST00000587303 SPRR5A0A1B0GTR4 108 aa4.53□□□□□ -1.68
PTPRS-204ENST00000587303 KRTAP19-3Q7Z4W3 81 aa4.52□□□□□ -1.69
PTPRS-204ENST00000587303 LCE3EQ5T5B0 92 aa4.51□□□□□ -1.69
PTPRS-204ENST00000587303 HERC1Q15751 4861 aa4.5□□□□□ -1.69
PTPRS-204ENST00000587303 LRP2P98164 4655 aa4.49□□□□□ -1.69
PTPRS-204ENST00000587303 RYR2Q92736 4967 aa4.49□□□□□ -1.69
PTPRS-204ENST00000587303 KIAA1109Q2LD37 5005 aa4.48□□□□□ -1.69
PTPRS-204ENST00000587303 LCE1BQ5T7P3 118 aa4.43□□□□□ -1.7
PTPRS-204ENST00000587303 KRTAP9-6A0A140TA67 174 aa4.43□□□□□ -1.7
PTPRS-204ENST00000587303 MT1LQ93083 61 aa4.37□□□□□ -1.71
PTPRS-204ENST00000587303 HERC2O95714 4834 aa4.37□□□□□ -1.71
PTPRS-204ENST00000587303 LOC100996750A0A140TA64 210 aa4.36□□□□□ -1.71
PTPRS-204ENST00000587303 LCE1DQ5T752 114 aa4.35□□□□□ -1.71
PTPRS-204ENST00000587303 MT1EP04732 61 aa4.34□□□□□ -1.71
PTPRS-204ENST00000587303 MT3P25713 68 aa4.32□□□□□ -1.72
PTPRS-204ENST00000587303 KRTAP4-3Q9BYR4 195 aa4.31□□□□□ -1.72
PTPRS-204ENST00000587303 PRM1P04553 51 aa4.31□□□□□ -1.72
PTPRS-204ENST00000587303 KMT2CQ8NEZ4 4911 aaKnown RBP4.3□□□□□ -1.72
PTPRS-204ENST00000587303 BIRC6Q9NR09 4857 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms