RNA–Protein interactions for RNA: ENST00000585058.1

RAB11FIP4-210, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 2

Gene RAB11FIP4, Length 5,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-210ENST00000585058 COL7A1Q02388 2944 aa5.8□□□□□ -1.48
RAB11FIP4-210ENST00000585058 DNAH1Q9P2D7 4330 aa5.79□□□□□ -1.48
RAB11FIP4-210ENST00000585058 PLECQ15149 4684 aaKnown RBP5.78□□□□□ -1.48
RAB11FIP4-210ENST00000585058 KRTAP10-4P60372 401 aaPredicted RBP5.77□□□□□ -1.49
RAB11FIP4-210ENST00000585058 CMYA5Q8N3K9 4069 aa5.77□□□□□ -1.49
RAB11FIP4-210ENST00000585058 KRTAP4-5Q9BYR2 181 aa5.75□□□□□ -1.49
RAB11FIP4-210ENST00000585058 LCE3AQ5TA76 89 aa5.74□□□□□ -1.49
RAB11FIP4-210ENST00000585058 DNAH10Q8IVF4 4471 aa5.73□□□□□ -1.49
RAB11FIP4-210ENST00000585058 DNAH3Q8TD57 4116 aa5.71□□□□□ -1.5
RAB11FIP4-210ENST00000585058 ANK2Q01484 3957 aa5.71□□□□□ -1.5
RAB11FIP4-210ENST00000585058 VPS13DQ5THJ4 4388 aa5.67□□□□□ -1.5
RAB11FIP4-210ENST00000585058 STARD9Q9P2P6 4700 aa5.63□□□□□ -1.51
RAB11FIP4-210ENST00000585058 KRTAP23-1A1A580 65 aa5.61□□□□□ -1.51
RAB11FIP4-210ENST00000585058 DNAH17Q9UFH2 4485 aa5.61□□□□□ -1.51
RAB11FIP4-210ENST00000585058 LORP23490 312 aaPredicted RBP5.61□□□□□ -1.51
RAB11FIP4-210ENST00000585058 KRTAP10-5P60370 271 aa5.59□□□□□ -1.51
RAB11FIP4-210ENST00000585058 DNAH5Q8TE73 4624 aa5.58□□□□□ -1.52
RAB11FIP4-210ENST00000585058 PRKDCP78527 4128 aaKnown RBP5.55□□□□□ -1.52
RAB11FIP4-210ENST00000585058 DNAH2Q9P225 4427 aa5.54□□□□□ -1.52
RAB11FIP4-210ENST00000585058 DNAH11Q96DT5 4516 aa5.53□□□□□ -1.52
RAB11FIP4-210ENST00000585058 KMT2AQ03164 3969 aa5.52□□□□□ -1.53
RAB11FIP4-210ENST00000585058 KRTAP8-1Q8IUC2 63 aa5.49□□□□□ -1.53
RAB11FIP4-210ENST00000585058 DYNC2H1Q8NCM8 4307 aaKnown RBP5.48□□□□□ -1.53
RAB11FIP4-210ENST00000585058 DNHD1Q96M86 4753 aa5.46□□□□□ -1.54
RAB11FIP4-210ENST00000585058 LYSTQ99698 3801 aa5.45□□□□□ -1.54
RAB11FIP4-210ENST00000585058 FAT2Q9NYQ8 4349 aa5.43□□□□□ -1.54
RAB11FIP4-210ENST00000585058 DNAH6Q9C0G6 4158 aa5.43□□□□□ -1.54
RAB11FIP4-210ENST00000585058 LRP1BQ9NZR2 4599 aa5.42□□□□□ -1.54
RAB11FIP4-210ENST00000585058 DYNC1H1Q14204 4646 aaKnown RBP5.39□□□□□ -1.55
RAB11FIP4-210ENST00000585058 DNAH8Q96JB1 4490 aa5.39□□□□□ -1.55
RAB11FIP4-210ENST00000585058 FRAS1Q86XX4 4008 aa5.38□□□□□ -1.55
RAB11FIP4-210ENST00000585058 DNAH7Q8WXX0 4024 aa5.36□□□□□ -1.55
RAB11FIP4-210ENST00000585058 VPS13BQ7Z7G8 4022 aa5.31□□□□□ -1.56
RAB11FIP4-210ENST00000585058 HECTD4Q9Y4D8 3996 aa5.3□□□□□ -1.56
RAB11FIP4-210ENST00000585058 SACSQ9NZJ4 4579 aa5.3□□□□□ -1.56
RAB11FIP4-210ENST00000585058 FAT1Q14517 4588 aa5.27□□□□□ -1.57
RAB11FIP4-210ENST00000585058 KRTAP4-1Q9BYQ7 146 aa5.21□□□□□ -1.57
RAB11FIP4-210ENST00000585058 MT1HP80294 61 aa5.19□□□□□ -1.58
RAB11FIP4-210ENST00000585058 MT2AP02795 61 aa5.14□□□□□ -1.59
RAB11FIP4-210ENST00000585058 KRTAP17-1Q9BYP8 105 aa5.12□□□□□ -1.59
RAB11FIP4-210ENST00000585058 APOBP04114 4563 aaKnown RBP5.12□□□□□ -1.59
RAB11FIP4-210ENST00000585058 HYDINQ4G0P3 5121 aa5.1□□□□□ -1.59
RAB11FIP4-210ENST00000585058 KRTAP19-5Q3LI72 72 aa5.1□□□□□ -1.59
RAB11FIP4-210ENST00000585058 SPRR2GQ9BYE4 73 aa5.09□□□□□ -1.59
RAB11FIP4-210ENST00000585058 KRTAP10-7P60409 375 aaPredicted RBP5.09□□□□□ -1.59
RAB11FIP4-210ENST00000585058 SPRR2FQ96RM1 72 aa5.09□□□□□ -1.59
RAB11FIP4-210ENST00000585058 RYR1P21817 5038 aa5.06□□□□□ -1.6
RAB11FIP4-210ENST00000585058 MT1FP04733 61 aa5.03□□□□□ -1.6
RAB11FIP4-210ENST00000585058 LCE3CQ5T5A8 94 aa5.03□□□□□ -1.6
RAB11FIP4-210ENST00000585058 RYR2Q92736 4967 aa4.99□□□□□ -1.61
RAB11FIP4-210ENST00000585058 PKD1P98161 4303 aa4.98□□□□□ -1.61
RAB11FIP4-210ENST00000585058 HSPG2P98160 4391 aa4.98□□□□□ -1.61
RAB11FIP4-210ENST00000585058 RYR3Q15413 4870 aa4.97□□□□□ -1.61
RAB11FIP4-210ENST00000585058 FAT3Q8TDW7 4589 aa4.95□□□□□ -1.62
RAB11FIP4-210ENST00000585058 PKHD1P08F94 4074 aa4.95□□□□□ -1.62
RAB11FIP4-210ENST00000585058 LRP1Q07954 4544 aaKnown RBP4.93□□□□□ -1.62
RAB11FIP4-210ENST00000585058 KIAA1109Q2LD37 5005 aa4.88□□□□□ -1.63
RAB11FIP4-210ENST00000585058 MYCBP2O75592 4640 aa4.81□□□□□ -1.64
RAB11FIP4-210ENST00000585058 TNXBP22105 4242 aa4.8□□□□□ -1.64
RAB11FIP4-210ENST00000585058 PKHD1L1Q86WI1 4243 aa4.8□□□□□ -1.64
RAB11FIP4-210ENST00000585058 LCE3BQ5TA77 95 aa4.79□□□□□ -1.64
RAB11FIP4-210ENST00000585058 KRTAP19-4Q3LI73 84 aa4.77□□□□□ -1.65
RAB11FIP4-210ENST00000585058 SPRR2EP22531 72 aa4.76□□□□□ -1.65
RAB11FIP4-210ENST00000585058 SPRR2BP35325 72 aa4.76□□□□□ -1.65
RAB11FIP4-210ENST00000585058 SPRR2AP35326 72 aa4.76□□□□□ -1.65
RAB11FIP4-210ENST00000585058 LPAP08519 4548 aa4.76□□□□□ -1.65
RAB11FIP4-210ENST00000585058 MT1GP13640 62 aa4.68□□□□□ -1.66
RAB11FIP4-210ENST00000585058 KRTAP12-4P60329 112 aa4.67□□□□□ -1.66
RAB11FIP4-210ENST00000585058 KRTAP19-1Q8IUB9 90 aa4.66□□□□□ -1.66
RAB11FIP4-210ENST00000585058 KRTAP19-8Q3LI54 63 aa4.66□□□□□ -1.66
RAB11FIP4-210ENST00000585058 BIRC6Q9NR09 4857 aa4.65□□□□□ -1.66
RAB11FIP4-210ENST00000585058 KMT2CQ8NEZ4 4911 aaKnown RBP4.64□□□□□ -1.67
RAB11FIP4-210ENST00000585058 MT1XP80297 61 aa4.62□□□□□ -1.67
RAB11FIP4-210ENST00000585058 HERC2O95714 4834 aa4.61□□□□□ -1.67
RAB11FIP4-210ENST00000585058 SPRR2DP22532 72 aa4.6□□□□□ -1.67
RAB11FIP4-210ENST00000585058 LRP2P98164 4655 aa4.57□□□□□ -1.68
RAB11FIP4-210ENST00000585058 LCE2BO14633 110 aa4.56□□□□□ -1.68
RAB11FIP4-210ENST00000585058 LCE2CQ5TA81 110 aa4.53□□□□□ -1.68
RAB11FIP4-210ENST00000585058 KRTAP4-8A0A0G2JLE6 195 aa4.53□□□□□ -1.68
RAB11FIP4-210ENST00000585058 KRTAP4-8Q9BYQ9 185 aa4.53□□□□□ -1.68
RAB11FIP4-210ENST00000585058 MT1BP07438 61 aa4.52□□□□□ -1.69
RAB11FIP4-210ENST00000585058 KRTAP9-8Q9BYQ0 159 aa4.51□□□□□ -1.69
RAB11FIP4-210ENST00000585058 MUC17Q685J3 4493 aa4.51□□□□□ -1.69
RAB11FIP4-210ENST00000585058 EPPK1P58107 5090 aaKnown RBP4.5□□□□□ -1.69
RAB11FIP4-210ENST00000585058 LCE3DQ9BYE3 92 aa4.49□□□□□ -1.69
RAB11FIP4-210ENST00000585058 HERC1Q15751 4861 aa4.47□□□□□ -1.69
RAB11FIP4-210ENST00000585058 PCLOQ9Y6V0 5065 aa4.41□□□□□ -1.7
RAB11FIP4-210ENST00000585058 LCE3EQ5T5B0 92 aa4.41□□□□□ -1.7
RAB11FIP4-210ENST00000585058 SPRR5A0A1B0GTR4 108 aa4.4□□□□□ -1.71
RAB11FIP4-210ENST00000585058 KRTAP19-2Q3LHN2 52 aa4.38□□□□□ -1.71
RAB11FIP4-210ENST00000585058 KRTAP9-3Q9BYQ3 159 aa4.38□□□□□ -1.71
RAB11FIP4-210ENST00000585058 ABCA13Q86UQ4 5058 aa4.34□□□□□ -1.72
RAB11FIP4-210ENST00000585058 FLGP20930 4061 aaPredicted RBP4.32□□□□□ -1.72
RAB11FIP4-210ENST00000585058 KRTAP4-7Q9BYR0 210 aa4.31□□□□□ -1.72
RAB11FIP4-210ENST00000585058 KRTAP19-3Q7Z4W3 81 aa4.28□□□□□ -1.72
RAB11FIP4-210ENST00000585058 MT1LQ93083 61 aa4.24□□□□□ -1.73
RAB11FIP4-210ENST00000585058 LCE2DQ5TA82 110 aaPredicted RBP4.23□□□□□ -1.73
RAB11FIP4-210ENST00000585058 MT1EP04732 61 aa4.18□□□□□ -1.74
RAB11FIP4-210ENST00000585058 PRM1P04553 51 aa4.13□□□□□ -1.75
RAB11FIP4-210ENST00000585058 MT4P47944 62 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 231.8 ms