RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 TIAM1Q13009 1591 aa-0.83□□□□□ -2.54
PPP4R1-227ENST00000583988 M0QY20 66 aa-0.84□□□□□ -2.54
PPP4R1-227ENST00000583988 ABRACLQ9P1F3 81 aa-0.84□□□□□ -2.54
PPP4R1-227ENST00000583988 ITPR1Q14643 2758 aa-0.85□□□□□ -2.55
PPP4R1-227ENST00000583988 C5orf42Q9H799 3197 aa-0.85□□□□□ -2.55
PPP4R1-227ENST00000583988 CROCC2H7BZ55 1655 aa-0.85□□□□□ -2.55
PPP4R1-227ENST00000583988 PLECQ15149 4684 aaKnown RBP-0.85□□□□□ -2.55
PPP4R1-227ENST00000583988 MAST1Q9Y2H9 1570 aa-0.87□□□□□ -2.55
PPP4R1-227ENST00000583988 KRTAP8-1Q8IUC2 63 aa-0.87□□□□□ -2.55
PPP4R1-227ENST00000583988 NMES1Q9C002 83 aa-0.87□□□□□ -2.55
PPP4R1-227ENST00000583988 TMEM167BQ9NRX6 74 aa-0.87□□□□□ -2.55
PPP4R1-227ENST00000583988 SPTAN1Q13813 2472 aaKnown RBP-0.87□□□□□ -2.55
PPP4R1-227ENST00000583988 CMYA5Q8N3K9 4069 aa-0.88□□□□□ -2.55
PPP4R1-227ENST00000583988 M0QZ58 72 aa-0.88□□□□□ -2.55
PPP4R1-227ENST00000583988 SMR3BP02814 79 aaPredicted RBP-0.88□□□□□ -2.55
PPP4R1-227ENST00000583988 A0A1B0GUL6 1792 aa-0.88□□□□□ -2.55
PPP4R1-227ENST00000583988 A8MTW9 85 aa-0.89□□□□□ -2.55
PPP4R1-227ENST00000583988 M0R1W7 72 aa-0.89□□□□□ -2.55
PPP4R1-227ENST00000583988 GLI2P10070 1586 aa-0.89□□□□□ -2.55
PPP4R1-227ENST00000583988 ABCA6Q8N139 1617 aa-0.89□□□□□ -2.55
PPP4R1-227ENST00000583988 EFCAB5A4FU69 1503 aa-0.89□□□□□ -2.55
PPP4R1-227ENST00000583988 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.9□□□□□ -2.55
PPP4R1-227ENST00000583988 MT1HL1P0DM35 61 aa-0.9□□□□□ -2.55
PPP4R1-227ENST00000583988 DNAH7Q8WXX0 4024 aa-0.9□□□□□ -2.55
PPP4R1-227ENST00000583988 SPENQ96T58 3664 aaKnown RBP-0.91□□□□□ -2.55
PPP4R1-227ENST00000583988 SPTBN5Q9NRC6 3674 aaKnown RBP-0.91□□□□□ -2.55
PPP4R1-227ENST00000583988 LRBAP50851 2863 aa-0.92□□□□□ -2.56
PPP4R1-227ENST00000583988 MYO9AB2RTY4 2548 aa-0.92□□□□□ -2.56
PPP4R1-227ENST00000583988 ALS2Q96Q42 1657 aa-0.92□□□□□ -2.56
PPP4R1-227ENST00000583988 KAAG1Q9UBP8 84 aa-0.93□□□□□ -2.56
PPP4R1-227ENST00000583988 EEA1Q15075 1411 aa-0.93□□□□□ -2.56
PPP4R1-227ENST00000583988 CCDC180Q9P1Z9 1646 aa-0.93□□□□□ -2.56
PPP4R1-227ENST00000583988 SMIM27A0A1W2PRY6 76 aa-0.94□□□□□ -2.56
PPP4R1-227ENST00000583988 MT1XP80297 61 aa-0.94□□□□□ -2.56
PPP4R1-227ENST00000583988 LINC00308Q8TCZ7 52 aa-0.94□□□□□ -2.56
PPP4R1-227ENST00000583988 FAM208AQ9UK61 1670 aaKnown RBP-0.94□□□□□ -2.56
PPP4R1-227ENST00000583988 SRCAPQ6ZRS2 3230 aa-0.95□□□□□ -2.56
PPP4R1-227ENST00000583988 PREX2Q70Z35 1606 aa-0.95□□□□□ -2.56
PPP4R1-227ENST00000583988 MT1BP07438 61 aa-0.95□□□□□ -2.56
PPP4R1-227ENST00000583988 EYSQ5T1H1 3165 aa-0.96□□□□□ -2.56
PPP4R1-227ENST00000583988 A0A087WWC5 75 aa-0.96□□□□□ -2.56
PPP4R1-227ENST00000583988 LINC01546A6NGU7 62 aa-0.96□□□□□ -2.56
PPP4R1-227ENST00000583988 CEP295Q9C0D2 2601 aa-0.97□□□□□ -2.56
PPP4R1-227ENST00000583988 DMXL2Q8TDJ6 3036 aa-0.97□□□□□ -2.57
PPP4R1-227ENST00000583988 CFAP46Q8IYW2 2715 aa-0.98□□□□□ -2.57
PPP4R1-227ENST00000583988 ADGRG4Q8IZF6 3080 aa-0.98□□□□□ -2.57
PPP4R1-227ENST00000583988 IGIPA6NJ69 53 aa-0.98□□□□□ -2.57
PPP4R1-227ENST00000583988 MT1EP04732 61 aa-0.98□□□□□ -2.57
PPP4R1-227ENST00000583988 S100ZQ8WXG8 99 aa-0.98□□□□□ -2.57
PPP4R1-227ENST00000583988 DYNC1H1Q14204 4646 aaKnown RBP-0.99□□□□□ -2.57
PPP4R1-227ENST00000583988 SPART-AS1P0CW21 52 aa-0.99□□□□□ -2.57
PPP4R1-227ENST00000583988 CHD7Q9P2D1 2997 aa-0.99□□□□□ -2.57
PPP4R1-227ENST00000583988 ABCA10Q8WWZ4 1543 aa-0.99□□□□□ -2.57
PPP4R1-227ENST00000583988 H0YGX0 51 aa-1□□□□□ -2.57
PPP4R1-227ENST00000583988 WFDC10BQ8IUB3 73 aa-1□□□□□ -2.57
PPP4R1-227ENST00000583988 EFCAB6Q5THR3 1501 aa-1□□□□□ -2.57
PPP4R1-227ENST00000583988 DNAH5Q8TE73 4624 aa-1.01□□□□□ -2.57
PPP4R1-227ENST00000583988 CSMD2Q7Z408 3487 aa-1.01□□□□□ -2.57
PPP4R1-227ENST00000583988 TLN1Q9Y490 2541 aaKnown RBP-1.01□□□□□ -2.57
PPP4R1-227ENST00000583988 ZFHX4Q86UP3 3567 aa-1.02□□□□□ -2.57
PPP4R1-227ENST00000583988 MGAQ8IWI9 3026 aa-1.02□□□□□ -2.57
PPP4R1-227ENST00000583988 UGGT1Q9NYU2 1555 aa-1.02□□□□□ -2.57
PPP4R1-227ENST00000583988 TRRAPQ9Y4A5 3859 aa-1.02□□□□□ -2.57
PPP4R1-227ENST00000583988 KIF21BO75037 1637 aa-1.03□□□□□ -2.57
PPP4R1-227ENST00000583988 SMIM5Q71RC9 77 aa-1.03□□□□□ -2.57
PPP4R1-227ENST00000583988 MT1LQ93083 61 aa-1.03□□□□□ -2.57
PPP4R1-227ENST00000583988 CPS1P31327 1500 aa-1.05□□□□□ -2.58
PPP4R1-227ENST00000583988 SMG1Q96Q15 3661 aaKnown RBP-1.06□□□□□ -2.58
PPP4R1-227ENST00000583988 DNAH17Q9UFH2 4485 aa-1.07□□□□□ -2.58
PPP4R1-227ENST00000583988 BOD1L1Q8NFC6 3051 aa-1.08□□□□□ -2.58
PPP4R1-227ENST00000583988 DEFB131AP59861 70 aa-1.08□□□□□ -2.58
PPP4R1-227ENST00000583988 MT1MQ8N339 61 aa-1.08□□□□□ -2.58
PPP4R1-227ENST00000583988 CSMD1Q96PZ7 3565 aa-1.08□□□□□ -2.58
PPP4R1-227ENST00000583988 CENPEQ02224 2701 aa-1.09□□□□□ -2.58
PPP4R1-227ENST00000583988 LMO7Q8WWI1 1683 aa-1.09□□□□□ -2.58
PPP4R1-227ENST00000583988 MT2AP02795 61 aa-1.09□□□□□ -2.58
PPP4R1-227ENST00000583988 PLNP26678 52 aa-1.1□□□□□ -2.59
PPP4R1-227ENST00000583988 PRXQ9BXM0 1461 aa-1.12□□□□□ -2.59
PPP4R1-227ENST00000583988 DNAH10Q8IVF4 4471 aa-1.13□□□□□ -2.59
PPP4R1-227ENST00000583988 MT1GP13640 62 aa-1.13□□□□□ -2.59
PPP4R1-227ENST00000583988 SYCP2Q9BX26 1530 aa-1.14□□□□□ -2.59
PPP4R1-227ENST00000583988 ABCA5Q8WWZ7 1642 aa-1.14□□□□□ -2.59
PPP4R1-227ENST00000583988 MROH2AA6NES4 1674 aa-1.15□□□□□ -2.59
PPP4R1-227ENST00000583988 MT1FP04733 61 aa-1.15□□□□□ -2.59
PPP4R1-227ENST00000583988 POLR2KP53803 58 aaKnown RBP-1.15□□□□□ -2.59
PPP4R1-227ENST00000583988 AGLP35573 1532 aa-1.16□□□□□ -2.6
PPP4R1-227ENST00000583988 SPEGQ15772 3267 aa-1.16□□□□□ -2.6
PPP4R1-227ENST00000583988 PRUNE2Q8WUY3 3088 aa-1.17□□□□□ -2.6
PPP4R1-227ENST00000583988 SMIM31A0A1B0GVY4 71 aa-1.17□□□□□ -2.6
PPP4R1-227ENST00000583988 FREM2Q5SZK8 3169 aa-1.17□□□□□ -2.6
PPP4R1-227ENST00000583988 LOC400499M0QZD8 3231 aa-1.18□□□□□ -2.6
PPP4R1-227ENST00000583988 ADCY10Q96PN6 1610 aa-1.18□□□□□ -2.6
PPP4R1-227ENST00000583988 LEAP2Q969E1 77 aa-1.19□□□□□ -2.6
PPP4R1-227ENST00000583988 ATMQ13315 3056 aa-1.2□□□□□ -2.6
PPP4R1-227ENST00000583988 TFF3Q07654 80 aa-1.2□□□□□ -2.6
PPP4R1-227ENST00000583988 SMIM2Q9BVW6 85 aa-1.21□□□□□ -2.6
PPP4R1-227ENST00000583988 DDX60Q8IY21 1712 aaKnown RBP-1.23□□□□□ -2.61
PPP4R1-227ENST00000583988 DEFB4AO15263 64 aa-1.23□□□□□ -2.61
PPP4R1-227ENST00000583988 DEFB136Q30KP8 78 aa-1.23□□□□□ -2.61
PPP4R1-227ENST00000583988 DCHS1Q96JQ0 3298 aa-1.23□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 379.9 ms