RNA–Protein interactions for RNA: ENST00000583705.1

MSI2-217, Transcript of musashi RNA binding protein 2, humanhuman

Gene MSI2, Length 7,612 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-217ENST00000583705 SPRR2FQ96RM1 72 aa4.67□□□□□ -1.66
MSI2-217ENST00000583705 OTOGQ6ZRI0 2925 aa4.66□□□□□ -1.66
MSI2-217ENST00000583705 KRTAP10-7P60409 375 aaPredicted RBP4.62□□□□□ -1.67
MSI2-217ENST00000583705 ALMS1Q8TCU4 4167 aa4.62□□□□□ -1.67
MSI2-217ENST00000583705 BSNQ9UPA5 3926 aa4.6□□□□□ -1.67
MSI2-217ENST00000583705 AKAP9Q99996 3911 aa4.53□□□□□ -1.68
MSI2-217ENST00000583705 KRTAP10-4P60372 401 aaPredicted RBP4.49□□□□□ -1.69
MSI2-217ENST00000583705 MT1HP80294 61 aa4.47□□□□□ -1.69
MSI2-217ENST00000583705 SPRR2EP22531 72 aa4.45□□□□□ -1.7
MSI2-217ENST00000583705 SPRR2BP35325 72 aa4.45□□□□□ -1.7
MSI2-217ENST00000583705 SPRR2AP35326 72 aa4.45□□□□□ -1.7
MSI2-217ENST00000583705 KRTAP23-1A1A580 65 aa4.45□□□□□ -1.7
MSI2-217ENST00000583705 KRTAP19-5Q3LI72 72 aa4.41□□□□□ -1.7
MSI2-217ENST00000583705 KRTAP4-1Q9BYQ7 146 aa4.38□□□□□ -1.71
MSI2-217ENST00000583705 ZNF469Q96JG9 3925 aaPredicted RBP4.34□□□□□ -1.71
MSI2-217ENST00000583705 LCE3BQ5TA77 95 aa4.33□□□□□ -1.72
MSI2-217ENST00000583705 DNAH1Q9P2D7 4330 aa4.33□□□□□ -1.72
MSI2-217ENST00000583705 DNAH2Q9P225 4427 aa4.32□□□□□ -1.72
MSI2-217ENST00000583705 MT2AP02795 61 aa4.32□□□□□ -1.72
MSI2-217ENST00000583705 SPRR2DP22532 72 aa4.29□□□□□ -1.72
MSI2-217ENST00000583705 LCE3CQ5T5A8 94 aa4.26□□□□□ -1.73
MSI2-217ENST00000583705 MT1FP04733 61 aa4.25□□□□□ -1.73
MSI2-217ENST00000583705 FRAS1Q86XX4 4008 aa4.22□□□□□ -1.73
MSI2-217ENST00000583705 VPS13BQ7Z7G8 4022 aa4.21□□□□□ -1.74
MSI2-217ENST00000583705 DNAH9Q9NYC9 4486 aa4.21□□□□□ -1.74
MSI2-217ENST00000583705 LCE2BO14633 110 aa4.19□□□□□ -1.74
MSI2-217ENST00000583705 ANK2Q01484 3957 aa4.19□□□□□ -1.74
MSI2-217ENST00000583705 SPRR2GQ9BYE4 73 aa4.16□□□□□ -1.74
MSI2-217ENST00000583705 KMT2AQ03164 3969 aa4.15□□□□□ -1.75
MSI2-217ENST00000583705 MT1GP13640 62 aa4.15□□□□□ -1.75
MSI2-217ENST00000583705 DNAH3Q8TD57 4116 aa4.12□□□□□ -1.75
MSI2-217ENST00000583705 LYSTQ99698 3801 aa4.12□□□□□ -1.75
MSI2-217ENST00000583705 KRTAP12-4P60329 112 aa4.12□□□□□ -1.75
MSI2-217ENST00000583705 FAT2Q9NYQ8 4349 aa4.11□□□□□ -1.75
MSI2-217ENST00000583705 DNAH10Q8IVF4 4471 aa4.09□□□□□ -1.76
MSI2-217ENST00000583705 DNAH8Q96JB1 4490 aa4.07□□□□□ -1.76
MSI2-217ENST00000583705 DNAH7Q8WXX0 4024 aa4.06□□□□□ -1.76
MSI2-217ENST00000583705 DNAH17Q9UFH2 4485 aa4.03□□□□□ -1.76
MSI2-217ENST00000583705 DNAH5Q8TE73 4624 aa4.01□□□□□ -1.77
MSI2-217ENST00000583705 SPRR5A0A1B0GTR4 108 aa4□□□□□ -1.77
MSI2-217ENST00000583705 LCE2CQ5TA81 110 aa4□□□□□ -1.77
MSI2-217ENST00000583705 LCE2DQ5TA82 110 aaPredicted RBP3.96□□□□□ -1.78
MSI2-217ENST00000583705 MT4P47944 62 aa3.95□□□□□ -1.78
MSI2-217ENST00000583705 CMYA5Q8N3K9 4069 aa3.94□□□□□ -1.78
MSI2-217ENST00000583705 DNAH11Q96DT5 4516 aa3.93□□□□□ -1.78
MSI2-217ENST00000583705 KRTAP4-8A0A0G2JLE6 195 aa3.93□□□□□ -1.78
MSI2-217ENST00000583705 KRTAP4-8Q9BYQ9 185 aa3.93□□□□□ -1.78
MSI2-217ENST00000583705 PRKDCP78527 4128 aaKnown RBP3.92□□□□□ -1.78
MSI2-217ENST00000583705 FAT1Q14517 4588 aa3.92□□□□□ -1.78
MSI2-217ENST00000583705 KRTAP19-1Q8IUB9 90 aa3.9□□□□□ -1.79
MSI2-217ENST00000583705 PLECQ15149 4684 aaKnown RBP3.9□□□□□ -1.79
MSI2-217ENST00000583705 DNAH6Q9C0G6 4158 aa3.89□□□□□ -1.79
MSI2-217ENST00000583705 LCE3DQ9BYE3 92 aa3.88□□□□□ -1.79
MSI2-217ENST00000583705 DYNC2H1Q8NCM8 4307 aaKnown RBP3.87□□□□□ -1.79
MSI2-217ENST00000583705 LRP1BQ9NZR2 4599 aa3.87□□□□□ -1.79
MSI2-217ENST00000583705 STARD9Q9P2P6 4700 aa3.83□□□□□ -1.8
MSI2-217ENST00000583705 LCE3EQ5T5B0 92 aa3.82□□□□□ -1.8
MSI2-217ENST00000583705 MT1XP80297 61 aa3.81□□□□□ -1.8
MSI2-217ENST00000583705 LCE1BQ5T7P3 118 aa3.8□□□□□ -1.8
MSI2-217ENST00000583705 VPS13DQ5THJ4 4388 aa3.79□□□□□ -1.8
MSI2-217ENST00000583705 LCE1DQ5T752 114 aa3.74□□□□□ -1.81
MSI2-217ENST00000583705 HECTD4Q9Y4D8 3996 aa3.74□□□□□ -1.81
MSI2-217ENST00000583705 KRTAP17-1Q9BYP8 105 aa3.73□□□□□ -1.81
MSI2-217ENST00000583705 SACSQ9NZJ4 4579 aa3.72□□□□□ -1.81
MSI2-217ENST00000583705 KRTAP19-8Q3LI54 63 aa3.72□□□□□ -1.81
MSI2-217ENST00000583705 APOBP04114 4563 aaKnown RBP3.71□□□□□ -1.82
MSI2-217ENST00000583705 KRTAP19-4Q3LI73 84 aa3.71□□□□□ -1.82
MSI2-217ENST00000583705 KRTAP4-7Q9BYR0 210 aa3.71□□□□□ -1.82
MSI2-217ENST00000583705 MT1BP07438 61 aa3.68□□□□□ -1.82
MSI2-217ENST00000583705 KRTAP9-8Q9BYQ0 159 aa3.65□□□□□ -1.82
MSI2-217ENST00000583705 KRTAP19-3Q7Z4W3 81 aa3.63□□□□□ -1.83
MSI2-217ENST00000583705 FAT3Q8TDW7 4589 aa3.63□□□□□ -1.83
MSI2-217ENST00000583705 LPAP08519 4548 aa3.63□□□□□ -1.83
MSI2-217ENST00000583705 PKD1P98161 4303 aa3.61□□□□□ -1.83
MSI2-217ENST00000583705 PKHD1P08F94 4074 aa3.6□□□□□ -1.83
MSI2-217ENST00000583705 KRTAP9-2Q9BYQ4 174 aa3.6□□□□□ -1.83
MSI2-217ENST00000583705 LCE5AQ5TCM9 118 aa3.6□□□□□ -1.83
MSI2-217ENST00000583705 PRM1P04553 51 aa3.59□□□□□ -1.83
MSI2-217ENST00000583705 PKHD1L1Q86WI1 4243 aa3.59□□□□□ -1.83
MSI2-217ENST00000583705 DYNC1H1Q14204 4646 aaKnown RBP3.59□□□□□ -1.83
MSI2-217ENST00000583705 LRP1Q07954 4544 aaKnown RBP3.59□□□□□ -1.84
MSI2-217ENST00000583705 LOC100996750A0A140TA64 210 aa3.58□□□□□ -1.84
MSI2-217ENST00000583705 KRTAP9-3Q9BYQ3 159 aa3.57□□□□□ -1.84
MSI2-217ENST00000583705 RYR1P21817 5038 aa3.55□□□□□ -1.84
MSI2-217ENST00000583705 FLGP20930 4061 aaPredicted RBP3.54□□□□□ -1.84
MSI2-217ENST00000583705 MT3P25713 68 aa3.53□□□□□ -1.84
MSI2-217ENST00000583705 KRTAP4-3Q9BYR4 195 aa3.51□□□□□ -1.85
MSI2-217ENST00000583705 MYCBP2O75592 4640 aa3.5□□□□□ -1.85
MSI2-217ENST00000583705 MT1LQ93083 61 aa3.5□□□□□ -1.85
MSI2-217ENST00000583705 DNHD1Q96M86 4753 aa3.48□□□□□ -1.85
MSI2-217ENST00000583705 HSPG2P98160 4391 aa3.48□□□□□ -1.85
MSI2-217ENST00000583705 MT1EP04732 61 aa3.46□□□□□ -1.86
MSI2-217ENST00000583705 KRTAP19-6Q3LI70 58 aa3.46□□□□□ -1.86
MSI2-217ENST00000583705 KRTAP20-1Q3LI63 56 aa3.44□□□□□ -1.86
MSI2-217ENST00000583705 KRTAP9-6A0A140TA67 174 aa3.43□□□□□ -1.86
MSI2-217ENST00000583705 LCE1CQ5T751 118 aa3.43□□□□□ -1.86
MSI2-217ENST00000583705 LCE1EQ5T753 118 aa3.43□□□□□ -1.86
MSI2-217ENST00000583705 LCE1FQ5T754 118 aa3.43□□□□□ -1.86
MSI2-217ENST00000583705 LCE1AQ5T7P2 110 aa3.43□□□□□ -1.86
MSI2-217ENST00000583705 MT1MQ8N339 61 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms