RNA–Protein interactions for RNA: ENST00000578664.1

GAPLINC-201, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3

Gene GAPLINC, Length 440 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-201ENST00000578664 MYCBP2O75592 4640 aa1.94□□□□□ -2.1
GAPLINC-201ENST00000578664 H0YGX0 51 aa1.93□□□□□ -2.1
GAPLINC-201ENST00000578664 KRTAP12-2P59991 146 aa1.93□□□□□ -2.1
GAPLINC-201ENST00000578664 DEFB1P60022 68 aa1.93□□□□□ -2.1
GAPLINC-201ENST00000578664 TRBV7-4A0A0J9YYF1 115 aa1.92□□□□□ -2.1
GAPLINC-201ENST00000578664 ATXN8Q156A1 80 aa1.92□□□□□ -2.1
GAPLINC-201ENST00000578664 PCOTHQ58A44 107 aa1.92□□□□□ -2.1
GAPLINC-201ENST00000578664 Q8IZM0 81 aa1.92□□□□□ -2.1
GAPLINC-201ENST00000578664 LINC00472Q9H8W2 130 aa1.92□□□□□ -2.1
GAPLINC-201ENST00000578664 CDKN2A-AS1Q9UH64 79 aa1.92□□□□□ -2.1
GAPLINC-201ENST00000578664 SRRM2Q9UQ35 2752 aaKnown RBP1.92□□□□□ -2.1
GAPLINC-201ENST00000578664 GVQW2A0A096LPI5 108 aaPredicted RBP1.91□□□□□ -2.1
GAPLINC-201ENST00000578664 KRTAP5-9P26371 169 aa1.91□□□□□ -2.1
GAPLINC-201ENST00000578664 LINC00308Q8TCZ7 52 aa1.91□□□□□ -2.1
GAPLINC-201ENST00000578664 ZCCHC13Q8WW36 166 aaKnown RBP1.91□□□□□ -2.1
GAPLINC-201ENST00000578664 NOP10Q9NPE3 64 aaKnown RBP1.91□□□□□ -2.1
GAPLINC-201ENST00000578664 LINC00959A0A1B0GUT2 108 aa1.9□□□□□ -2.11
GAPLINC-201ENST00000578664 H0Y9P7 68 aa1.9□□□□□ -2.11
GAPLINC-201ENST00000578664 SPART-AS1P0CW21 52 aa1.9□□□□□ -2.11
GAPLINC-201ENST00000578664 HTN1P15515 57 aa1.9□□□□□ -2.11
GAPLINC-201ENST00000578664 COX6A2Q02221 97 aa1.9□□□□□ -2.11
GAPLINC-201ENST00000578664 LELP1Q5T871 98 aa1.9□□□□□ -2.11
GAPLINC-201ENST00000578664 SMIM11BQ8TCY0 68 aa1.9□□□□□ -2.11
GAPLINC-201ENST00000578664 DNAH8Q96JB1 4490 aa1.9□□□□□ -2.11
GAPLINC-201ENST00000578664 HMCN2Q8NDA2 5059 aa1.9□□□□□ -2.11
GAPLINC-201ENST00000578664 SPATA8Q6RVD6 105 aa1.89□□□□□ -2.11
GAPLINC-201ENST00000578664 FAT3Q8TDW7 4589 aa1.88□□□□□ -2.11
GAPLINC-201ENST00000578664 NCR3O14931 201 aa1.88□□□□□ -2.11
GAPLINC-201ENST00000578664 RNF213Q63HN8 5207 aa1.88□□□□□ -2.11
GAPLINC-201ENST00000578664 LRP1Q07954 4544 aaKnown RBP1.88□□□□□ -2.11
GAPLINC-201ENST00000578664 DEFB135Q30KP9 77 aa1.87□□□□□ -2.11
GAPLINC-201ENST00000578664 KRTAP5-1Q6L8H4 278 aa1.87□□□□□ -2.11
GAPLINC-201ENST00000578664 APLNQ9ULZ1 77 aa1.87□□□□□ -2.11
GAPLINC-201ENST00000578664 LINC00158P58513 81 aa1.86□□□□□ -2.11
GAPLINC-201ENST00000578664 PLAC4Q8WY50 150 aa1.86□□□□□ -2.11
GAPLINC-201ENST00000578664 PKHD1L1Q86WI1 4243 aa1.86□□□□□ -2.11
GAPLINC-201ENST00000578664 A0A096LPF7 62 aa1.85□□□□□ -2.11
GAPLINC-201ENST00000578664 DEFB4AO15263 64 aa1.85□□□□□ -2.11
GAPLINC-201ENST00000578664 DEFB130BP0DP73 79 aa1.85□□□□□ -2.11
GAPLINC-201ENST00000578664 DEFB130AP0DP74 79 aa1.85□□□□□ -2.11
GAPLINC-201ENST00000578664 RPL37P61927 97 aaKnown RBP1.85□□□□□ -2.11
GAPLINC-201ENST00000578664 LINC01556Q5JQF7 62 aa1.85□□□□□ -2.11
GAPLINC-201ENST00000578664 NDUFB1O75438 58 aa1.84□□□□□ -2.11
GAPLINC-201ENST00000578664 ANGP03950 147 aaKnown RBP1.84□□□□□ -2.11
GAPLINC-201ENST00000578664 SPINK7P58062 85 aa1.84□□□□□ -2.11
GAPLINC-201ENST00000578664 ENHOQ6UWT2 76 aa1.84□□□□□ -2.11
GAPLINC-201ENST00000578664 Q6ZRX8 168 aa1.84□□□□□ -2.11
GAPLINC-201ENST00000578664 DMBT1Q9UGM3 2413 aaPredicted RBP1.83□□□□□ -2.12
GAPLINC-201ENST00000578664 KRTAP10-10P60014 251 aa1.83□□□□□ -2.12
GAPLINC-201ENST00000578664 DEFB104AQ8WTQ1 72 aa1.82□□□□□ -2.12
GAPLINC-201ENST00000578664 KCNQ1DNQ9H478 68 aa1.82□□□□□ -2.12
GAPLINC-201ENST00000578664 TOMM7Q9P0U1 55 aa1.82□□□□□ -2.12
GAPLINC-201ENST00000578664 TNXBP22105 4242 aa1.82□□□□□ -2.12
GAPLINC-201ENST00000578664 LRP2P98164 4655 aa1.82□□□□□ -2.12
GAPLINC-201ENST00000578664 DEFB131BA0A096LNP1 70 aa1.81□□□□□ -2.12
GAPLINC-201ENST00000578664 SPRR1AP35321 89 aa1.81□□□□□ -2.12
GAPLINC-201ENST00000578664 FLG2Q5D862 2391 aaPredicted RBP1.81□□□□□ -2.12
GAPLINC-201ENST00000578664 IGLV5-48A0A075B6I7 105 aa1.8□□□□□ -2.12
GAPLINC-201ENST00000578664 COX7BP24311 80 aa1.8□□□□□ -2.12
GAPLINC-201ENST00000578664 KRTAP6-3Q3LI67 103 aa1.8□□□□□ -2.12
GAPLINC-201ENST00000578664 UBL5Q9BZL1 73 aa1.8□□□□□ -2.12
GAPLINC-201ENST00000578664 C6orf48Q9UBA6 75 aa1.8□□□□□ -2.12
GAPLINC-201ENST00000578664 KRTAP12-1P59990 96 aa1.79□□□□□ -2.12
GAPLINC-201ENST00000578664 SPRR1BP22528 89 aa1.78□□□□□ -2.12
GAPLINC-201ENST00000578664 Q5VSD8 79 aa1.78□□□□□ -2.12
GAPLINC-201ENST00000578664 WFDC10BQ8IUB3 73 aa1.78□□□□□ -2.12
GAPLINC-201ENST00000578664 UBE2DNLQ8IWF7 75 aa1.78□□□□□ -2.12
GAPLINC-201ENST00000578664 LPAP08519 4548 aa1.78□□□□□ -2.13
GAPLINC-201ENST00000578664 SMR3BP02814 79 aaPredicted RBP1.77□□□□□ -2.13
GAPLINC-201ENST00000578664 KRTAP5-4Q6L8H1 288 aa1.77□□□□□ -2.13
GAPLINC-201ENST00000578664 KRTAP4-4Q9BYR3 166 aa1.77□□□□□ -2.13
GAPLINC-201ENST00000578664 MUC2Q02817 5179 aa1.76□□□□□ -2.13
GAPLINC-201ENST00000578664 A0A1B0GU69 56 aa1.76□□□□□ -2.13
GAPLINC-201ENST00000578664 HTN3P15516 51 aa1.76□□□□□ -2.13
GAPLINC-201ENST00000578664 HAMPP81172 84 aa1.76□□□□□ -2.13
GAPLINC-201ENST00000578664 LCE3AQ5TA76 89 aa1.75□□□□□ -2.13
GAPLINC-201ENST00000578664 CLPSL2Q6UWE3 100 aa1.75□□□□□ -2.13
GAPLINC-201ENST00000578664 ETDCA0A1B0GVM5 59 aa1.74□□□□□ -2.13
GAPLINC-201ENST00000578664 NREPQ16612 68 aa1.74□□□□□ -2.13
GAPLINC-201ENST00000578664 KRTAP10-4P60372 401 aaPredicted RBP1.73□□□□□ -2.13
GAPLINC-201ENST00000578664 KRTAP13-1Q8IUC0 172 aa1.73□□□□□ -2.13
GAPLINC-201ENST00000578664 LCE3DQ9BYE3 92 aa1.71□□□□□ -2.14
GAPLINC-201ENST00000578664 FAT4Q6V0I7 4981 aa1.7□□□□□ -2.14
GAPLINC-201ENST00000578664 MT1HL1P0DM35 61 aa1.7□□□□□ -2.14
GAPLINC-201ENST00000578664 Q6ZSA8 131 aa1.7□□□□□ -2.14
GAPLINC-201ENST00000578664 SSBP3-AS1Q7Z2R9 100 aa1.7□□□□□ -2.14
GAPLINC-201ENST00000578664 TP53AIP1Q9HCN2 124 aa1.7□□□□□ -2.14
GAPLINC-201ENST00000578664 A0A096LNI7 61 aa1.69□□□□□ -2.14
GAPLINC-201ENST00000578664 KRTAP12-4P60329 112 aa1.69□□□□□ -2.14
GAPLINC-201ENST00000578664 HMCN1Q96RW7 5635 aa1.69□□□□□ -2.14
GAPLINC-201ENST00000578664 KRTAP5-5Q701N2 237 aaPredicted RBP1.67□□□□□ -2.14
GAPLINC-201ENST00000578664 DEFB105AQ8NG35 78 aa1.67□□□□□ -2.14
GAPLINC-201ENST00000578664 FSIP2Q5CZC0 6907 aa1.66□□□□□ -2.14
GAPLINC-201ENST00000578664 RPS29P62273 56 aaKnown RBP1.66□□□□□ -2.14
GAPLINC-201ENST00000578664 K7EQZ3 153 aa1.64□□□□□ -2.15
GAPLINC-201ENST00000578664 PRLHP81277 87 aa1.64□□□□□ -2.15
GAPLINC-201ENST00000578664 MUC17Q685J3 4493 aa1.63□□□□□ -2.15
GAPLINC-201ENST00000578664 MMP24-AS1A0A0U1RRL7 71 aa1.62□□□□□ -2.15
GAPLINC-201ENST00000578664 SPINK1P00995 79 aa1.62□□□□□ -2.15
GAPLINC-201ENST00000578664 KRTAP5-2Q701N4 177 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms