RNA–Protein interactions for RNA: ENST00000578029.1

KRT39-202, Transcript of keratin 39, humanhuman

TSL 3

Gene KRT39, Length 777 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-202ENST00000578029 DNAH7Q8WXX0 4024 aa2.26□□□□□ -2.05
KRT39-202ENST00000578029 DEFB108BQ8NET1 73 aa2.25□□□□□ -2.05
KRT39-202ENST00000578029 H3BUA1 57 aa2.24□□□□□ -2.05
KRT39-202ENST00000578029 CLPSL2Q6UWE3 100 aa2.24□□□□□ -2.05
KRT39-202ENST00000578029 RHPN1-AS1Q9BWJ2 59 aa2.24□□□□□ -2.05
KRT39-202ENST00000578029 DMBT1Q9UGM3 2413 aaPredicted RBP2.23□□□□□ -2.05
KRT39-202ENST00000578029 HECTD4Q9Y4D8 3996 aa2.23□□□□□ -2.05
KRT39-202ENST00000578029 G3V318 75 aa2.23□□□□□ -2.05
KRT39-202ENST00000578029 DEFB1P60022 68 aa2.23□□□□□ -2.05
KRT39-202ENST00000578029 TPRXLQ17RH7 258 aa2.23□□□□□ -2.05
KRT39-202ENST00000578029 SPINK13Q1W4C9 94 aa2.23□□□□□ -2.05
KRT39-202ENST00000578029 USMG5Q96IX5 58 aa2.23□□□□□ -2.05
KRT39-202ENST00000578029 MRPL34Q9BQ48 92 aaKnown RBP2.23□□□□□ -2.05
KRT39-202ENST00000578029 Q6ZRX8 168 aa2.22□□□□□ -2.05
KRT39-202ENST00000578029 DEFB105AQ8NG35 78 aa2.22□□□□□ -2.05
KRT39-202ENST00000578029 H0YAA0 97 aa2.21□□□□□ -2.06
KRT39-202ENST00000578029 COX6B2Q6YFQ2 88 aa2.21□□□□□ -2.06
KRT39-202ENST00000578029 CRIPTQ9P021 101 aa2.21□□□□□ -2.06
KRT39-202ENST00000578029 PKHD1P08F94 4074 aa2.2□□□□□ -2.06
KRT39-202ENST00000578029 WNK2Q9Y3S1 2297 aa2.2□□□□□ -2.06
KRT39-202ENST00000578029 SPRR1AP35321 89 aa2.2□□□□□ -2.06
KRT39-202ENST00000578029 Q6ZSA8 131 aa2.2□□□□□ -2.06
KRT39-202ENST00000578029 PLAC4Q8WY50 150 aa2.2□□□□□ -2.06
KRT39-202ENST00000578029 STARD9Q9P2P6 4700 aa2.19□□□□□ -2.06
KRT39-202ENST00000578029 UNQ6190/PRO20217Q6UXQ8 127 aa2.19□□□□□ -2.06
KRT39-202ENST00000578029 SPACA4Q8TDM5 124 aa2.19□□□□□ -2.06
KRT39-202ENST00000578029 KRTAP5-9P26371 169 aa2.18□□□□□ -2.06
KRT39-202ENST00000578029 PLECQ15149 4684 aaKnown RBP2.18□□□□□ -2.06
KRT39-202ENST00000578029 H1FX-AS1Q4G0G2 97 aa2.17□□□□□ -2.06
KRT39-202ENST00000578029 PP632Q6XCG6 107 aa2.17□□□□□ -2.06
KRT39-202ENST00000578029 ALMS1Q8TCU4 4167 aa2.17□□□□□ -2.06
KRT39-202ENST00000578029 HUWE1Q7Z6Z7 4374 aaKnown RBP2.17□□□□□ -2.06
KRT39-202ENST00000578029 INE1O15225 51 aa2.16□□□□□ -2.06
KRT39-202ENST00000578029 HTN1P15515 57 aa2.16□□□□□ -2.06
KRT39-202ENST00000578029 DNAH10Q8IVF4 4471 aa2.16□□□□□ -2.06
KRT39-202ENST00000578029 HSPG2P98160 4391 aa2.15□□□□□ -2.07
KRT39-202ENST00000578029 SPRR1BP22528 89 aa2.15□□□□□ -2.07
KRT39-202ENST00000578029 KRTAP10-1P60331 282 aa2.15□□□□□ -2.07
KRT39-202ENST00000578029 LCE3AQ5TA76 89 aa2.15□□□□□ -2.07
KRT39-202ENST00000578029 RPL37P61927 97 aaKnown RBP2.14□□□□□ -2.07
KRT39-202ENST00000578029 DYNC1H1Q14204 4646 aaKnown RBP2.14□□□□□ -2.07
KRT39-202ENST00000578029 KMT2AQ03164 3969 aa2.14□□□□□ -2.07
KRT39-202ENST00000578029 DNAH11Q96DT5 4516 aa2.14□□□□□ -2.07
KRT39-202ENST00000578029 H3BUX3 64 aa2.13□□□□□ -2.07
KRT39-202ENST00000578029 DEFB130BP0DP73 79 aa2.12□□□□□ -2.07
KRT39-202ENST00000578029 DEFB130AP0DP74 79 aa2.12□□□□□ -2.07
KRT39-202ENST00000578029 C10orf99Q6UWK7 81 aa2.12□□□□□ -2.07
KRT39-202ENST00000578029 Q6ZRN7 208 aaPredicted RBP2.12□□□□□ -2.07
KRT39-202ENST00000578029 SRRM2Q9UQ35 2752 aaKnown RBP2.12□□□□□ -2.07
KRT39-202ENST00000578029 HMCN2Q8NDA2 5059 aa2.11□□□□□ -2.07
KRT39-202ENST00000578029 LYNX1P0DP58 116 aa2.1□□□□□ -2.07
KRT39-202ENST00000578029 FAT2Q9NYQ8 4349 aa2.1□□□□□ -2.07
KRT39-202ENST00000578029 K7EIL1 84 aa2.09□□□□□ -2.07
KRT39-202ENST00000578029 C10orf95Q9H7T3 257 aa2.09□□□□□ -2.07
KRT39-202ENST00000578029 VPS13DQ5THJ4 4388 aa2.09□□□□□ -2.07
KRT39-202ENST00000578029 NOP10Q9NPE3 64 aaKnown RBP2.08□□□□□ -2.08
KRT39-202ENST00000578029 DNAH6Q9C0G6 4158 aa2.08□□□□□ -2.08
KRT39-202ENST00000578029 DNAH2Q9P225 4427 aa2.07□□□□□ -2.08
KRT39-202ENST00000578029 MYCBP2O75592 4640 aa2.07□□□□□ -2.08
KRT39-202ENST00000578029 MUC2Q02817 5179 aa2.07□□□□□ -2.08
KRT39-202ENST00000578029 RNF213Q63HN8 5207 aa2.07□□□□□ -2.08
KRT39-202ENST00000578029 UBE2DNLQ8IWF7 75 aa2.07□□□□□ -2.08
KRT39-202ENST00000578029 DNAH17Q9UFH2 4485 aa2.06□□□□□ -2.08
KRT39-202ENST00000578029 FLG2Q5D862 2391 aaPredicted RBP2.06□□□□□ -2.08
KRT39-202ENST00000578029 KRTAP6-3Q3LI67 103 aa2.06□□□□□ -2.08
KRT39-202ENST00000578029 KRTAP13-4Q3LI77 160 aa2.06□□□□□ -2.08
KRT39-202ENST00000578029 PRO0255Q9UI72 69 aa2.06□□□□□ -2.08
KRT39-202ENST00000578029 PRLHP81277 87 aa2.05□□□□□ -2.08
KRT39-202ENST00000578029 LELP1Q5T871 98 aa2.05□□□□□ -2.08
KRT39-202ENST00000578029 FAT4Q6V0I7 4981 aa2.04□□□□□ -2.08
KRT39-202ENST00000578029 KRTAP5-5Q701N2 237 aaPredicted RBP2.04□□□□□ -2.08
KRT39-202ENST00000578029 KRTAP4-3Q9BYR4 195 aa2.04□□□□□ -2.08
KRT39-202ENST00000578029 APOBP04114 4563 aaKnown RBP2.03□□□□□ -2.08
KRT39-202ENST00000578029 PKD1P98161 4303 aa2.03□□□□□ -2.08
KRT39-202ENST00000578029 LRP1BQ9NZR2 4599 aa2.02□□□□□ -2.09
KRT39-202ENST00000578029 DEFB136Q30KP8 78 aa2.02□□□□□ -2.09
KRT39-202ENST00000578029 SPINK1P00995 79 aa2.01□□□□□ -2.09
KRT39-202ENST00000578029 FSIP2Q5CZC0 6907 aa2.01□□□□□ -2.09
KRT39-202ENST00000578029 KRTAP12-1P59990 96 aa2□□□□□ -2.09
KRT39-202ENST00000578029 KRTAP13-1Q8IUC0 172 aa2□□□□□ -2.09
KRT39-202ENST00000578029 OBSCNQ5VST9 7968 aa1.99□□□□□ -2.09
KRT39-202ENST00000578029 S4R3F8 94 aa1.98□□□□□ -2.09
KRT39-202ENST00000578029 FAT1Q14517 4588 aa1.98□□□□□ -2.09
KRT39-202ENST00000578029 PKHD1L1Q86WI1 4243 aa1.97□□□□□ -2.09
KRT39-202ENST00000578029 LRP2P98164 4655 aa1.97□□□□□ -2.09
KRT39-202ENST00000578029 DNAH5Q8TE73 4624 aa1.96□□□□□ -2.1
KRT39-202ENST00000578029 VPS13BQ7Z7G8 4022 aa1.95□□□□□ -2.1
KRT39-202ENST00000578029 A0A096LPF7 62 aa1.95□□□□□ -2.1
KRT39-202ENST00000578029 APLNQ9ULZ1 77 aa1.95□□□□□ -2.1
KRT39-202ENST00000578029 H3BNG1 76 aa1.92□□□□□ -2.1
KRT39-202ENST00000578029 KRTAP12-3P60328 96 aa1.92□□□□□ -2.1
KRT39-202ENST00000578029 CRCT1Q9UGL9 99 aa1.91□□□□□ -2.1
KRT39-202ENST00000578029 A0A096LNI7 61 aa1.9□□□□□ -2.11
KRT39-202ENST00000578029 A0A0D9SG42 100 aa1.89□□□□□ -2.11
KRT39-202ENST00000578029 LINC01556Q5JQF7 62 aa1.89□□□□□ -2.11
KRT39-202ENST00000578029 TNXBP22105 4242 aa1.89□□□□□ -2.11
KRT39-202ENST00000578029 LRP1Q07954 4544 aaKnown RBP1.88□□□□□ -2.11
KRT39-202ENST00000578029 LCE1CQ5T751 118 aa1.88□□□□□ -2.11
KRT39-202ENST00000578029 LCE1BQ5T7P3 118 aa1.88□□□□□ -2.11
KRT39-202ENST00000578029 SPINK6Q6UWN8 80 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms