RNA–Protein interactions for RNA: ENST00000576979.1

CTNS-210, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-210ENST00000576979 Q6ZSA8 131 aa3.22□□□□□ -1.89
CTNS-210ENST00000576979 TYMSOSQ8TAI1 123 aa3.22□□□□□ -1.89
CTNS-210ENST00000576979 DNAH17Q9UFH2 4485 aa3.22□□□□□ -1.89
CTNS-210ENST00000576979 CSMD3Q7Z407 3707 aa3.21□□□□□ -1.89
CTNS-210ENST00000576979 KRTAP16-1A8MUX0 517 aa3.21□□□□□ -1.9
CTNS-210ENST00000576979 C7orf65Q6ZTY9 151 aa3.21□□□□□ -1.9
CTNS-210ENST00000576979 DNAH6Q9C0G6 4158 aa3.21□□□□□ -1.9
CTNS-210ENST00000576979 SPINK1P00995 79 aa3.2□□□□□ -1.9
CTNS-210ENST00000576979 CAMK2N1Q7Z7J9 78 aa3.2□□□□□ -1.9
CTNS-210ENST00000576979 ALMS1Q8TCU4 4167 aa3.2□□□□□ -1.9
CTNS-210ENST00000576979 KRTAP1-4P0C5Y4 121 aa3.19□□□□□ -1.9
CTNS-210ENST00000576979 STARD9Q9P2P6 4700 aa3.19□□□□□ -1.9
CTNS-210ENST00000576979 LINC00304Q8N9R0 145 aa3.18□□□□□ -1.9
CTNS-210ENST00000576979 A0A1B0GVY2 172 aa3.17□□□□□ -1.9
CTNS-210ENST00000576979 RPS29P62273 56 aaKnown RBP3.17□□□□□ -1.9
CTNS-210ENST00000576979 LCE3AQ5TA76 89 aa3.17□□□□□ -1.9
CTNS-210ENST00000576979 UQCR11O14957 56 aa3.16□□□□□ -1.9
CTNS-210ENST00000576979 PRKDCP78527 4128 aaKnown RBP3.16□□□□□ -1.9
CTNS-210ENST00000576979 DNAH8Q96JB1 4490 aa3.15□□□□□ -1.9
CTNS-210ENST00000576979 MIR22HGQ0VDD5 57 aa3.15□□□□□ -1.91
CTNS-210ENST00000576979 SPATA8Q6RVD6 105 aa3.15□□□□□ -1.91
CTNS-210ENST00000576979 RBM12B-AS1Q9P1G2 102 aa3.15□□□□□ -1.91
CTNS-210ENST00000576979 DNAH2Q9P225 4427 aa3.13□□□□□ -1.91
CTNS-210ENST00000576979 MEGF8Q7Z7M0 2845 aa3.13□□□□□ -1.91
CTNS-210ENST00000576979 KMT2AQ03164 3969 aa3.12□□□□□ -1.91
CTNS-210ENST00000576979 FBN3Q75N90 2809 aa3.11□□□□□ -1.91
CTNS-210ENST00000576979 FRAS1Q86XX4 4008 aa3.11□□□□□ -1.91
CTNS-210ENST00000576979 TGP01266 2768 aa3.1□□□□□ -1.91
CTNS-210ENST00000576979 DNAH11Q96DT5 4516 aa3.1□□□□□ -1.91
CTNS-210ENST00000576979 C9orf92A6NGG3 77 aa3.09□□□□□ -1.91
CTNS-210ENST00000576979 A8MUU9 505 aa3.09□□□□□ -1.91
CTNS-210ENST00000576979 C20orf166-AS1Q96NR2 134 aa3.09□□□□□ -1.91
CTNS-210ENST00000576979 DNAH5Q8TE73 4624 aa3.08□□□□□ -1.92
CTNS-210ENST00000576979 SMR3BP02814 79 aaPredicted RBP3.07□□□□□ -1.92
CTNS-210ENST00000576979 KRTAP21-3Q3LHN1 58 aa3.05□□□□□ -1.92
CTNS-210ENST00000576979 KRTAP10-8P60410 259 aa3.04□□□□□ -1.92
CTNS-210ENST00000576979 PKD1P98161 4303 aa3.03□□□□□ -1.92
CTNS-210ENST00000576979 A0A1B0GU33 70 aa3.03□□□□□ -1.92
CTNS-210ENST00000576979 H1FX-AS1Q4G0G2 97 aa3.02□□□□□ -1.93
CTNS-210ENST00000576979 COX6B2Q6YFQ2 88 aa3.02□□□□□ -1.93
CTNS-210ENST00000576979 ADM2Q7Z4H4 148 aa3.02□□□□□ -1.93
CTNS-210ENST00000576979 SACSQ9NZJ4 4579 aa3.02□□□□□ -1.93
CTNS-210ENST00000576979 K7ERS5 55 aa3.01□□□□□ -1.93
CTNS-210ENST00000576979 LINC01554Q52M75 96 aa3.01□□□□□ -1.93
CTNS-210ENST00000576979 KRTAP10-4P60372 401 aaPredicted RBP3□□□□□ -1.93
CTNS-210ENST00000576979 H0YAA0 97 aa2.99□□□□□ -1.93
CTNS-210ENST00000576979 CSAG1Q6PB30 78 aa2.99□□□□□ -1.93
CTNS-210ENST00000576979 VPS13BQ7Z7G8 4022 aa2.99□□□□□ -1.93
CTNS-210ENST00000576979 FAT2Q9NYQ8 4349 aa2.97□□□□□ -1.93
CTNS-210ENST00000576979 LUZP6Q538Z0 58 aa2.96□□□□□ -1.94
CTNS-210ENST00000576979 LRP1BQ9NZR2 4599 aa2.96□□□□□ -1.94
CTNS-210ENST00000576979 FLG2Q5D862 2391 aaPredicted RBP2.95□□□□□ -1.94
CTNS-210ENST00000576979 RPL37P61927 97 aaKnown RBP2.95□□□□□ -1.94
CTNS-210ENST00000576979 LCE3EQ5T5B0 92 aa2.95□□□□□ -1.94
CTNS-210ENST00000576979 HYDINQ4G0P3 5121 aa2.94□□□□□ -1.94
CTNS-210ENST00000576979 S4R3F8 94 aa2.93□□□□□ -1.94
CTNS-210ENST00000576979 PKHD1L1Q86WI1 4243 aa2.93□□□□□ -1.94
CTNS-210ENST00000576979 KRTAP25-1Q3LHN0 102 aa2.92□□□□□ -1.94
CTNS-210ENST00000576979 Q5VSD8 79 aa2.92□□□□□ -1.94
CTNS-210ENST00000576979 KRTAP5-5Q701N2 237 aaPredicted RBP2.92□□□□□ -1.94
CTNS-210ENST00000576979 APOBP04114 4563 aaKnown RBP2.9□□□□□ -1.94
CTNS-210ENST00000576979 PKHD1P08F94 4074 aa2.9□□□□□ -1.95
CTNS-210ENST00000576979 DYNC1H1Q14204 4646 aaKnown RBP2.89□□□□□ -1.95
CTNS-210ENST00000576979 ROMO1P60602 79 aa2.88□□□□□ -1.95
CTNS-210ENST00000576979 KRTAP5-8O75690 187 aa2.87□□□□□ -1.95
CTNS-210ENST00000576979 A0A0D9SG42 100 aa2.86□□□□□ -1.95
CTNS-210ENST00000576979 DNHD1Q96M86 4753 aa2.85□□□□□ -1.95
CTNS-210ENST00000576979 DMBT1Q9UGM3 2413 aaPredicted RBP2.84□□□□□ -1.95
CTNS-210ENST00000576979 KRTAP13-4Q3LI77 160 aa2.82□□□□□ -1.96
CTNS-210ENST00000576979 CRIPTQ9P021 101 aa2.82□□□□□ -1.96
CTNS-210ENST00000576979 FAT1Q14517 4588 aa2.81□□□□□ -1.96
CTNS-210ENST00000576979 P0C880 135 aa2.81□□□□□ -1.96
CTNS-210ENST00000576979 TPRXLQ17RH7 258 aa2.81□□□□□ -1.96
CTNS-210ENST00000576979 TNXBP22105 4242 aa2.81□□□□□ -1.96
CTNS-210ENST00000576979 MT1HL1P0DM35 61 aa2.8□□□□□ -1.96
CTNS-210ENST00000576979 KRTAP12-2P59991 146 aa2.8□□□□□ -1.96
CTNS-210ENST00000576979 M0QZ58 72 aa2.79□□□□□ -1.96
CTNS-210ENST00000576979 FAT3Q8TDW7 4589 aa2.78□□□□□ -1.96
CTNS-210ENST00000576979 SPINT4Q6UDR6 99 aa2.78□□□□□ -1.96
CTNS-210ENST00000576979 RYR2Q92736 4967 aa2.76□□□□□ -1.97
CTNS-210ENST00000576979 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
CTNS-210ENST00000576979 LCE1BQ5T7P3 118 aa2.76□□□□□ -1.97
CTNS-210ENST00000576979 KRTAP12-1P59990 96 aa2.75□□□□□ -1.97
CTNS-210ENST00000576979 HSPG2P98160 4391 aa2.75□□□□□ -1.97
CTNS-210ENST00000576979 LRP1Q07954 4544 aaKnown RBP2.74□□□□□ -1.97
CTNS-210ENST00000576979 C10orf95Q9H7T3 257 aa2.72□□□□□ -1.97
CTNS-210ENST00000576979 R4GN34 69 aa2.71□□□□□ -1.98
CTNS-210ENST00000576979 RYR1P21817 5038 aa2.68□□□□□ -1.98
CTNS-210ENST00000576979 MYCBP2O75592 4640 aa2.63□□□□□ -1.99
CTNS-210ENST00000576979 KMT2CQ8NEZ4 4911 aaKnown RBP2.6□□□□□ -1.99
CTNS-210ENST00000576979 KRTAP4-1Q9BYQ7 146 aa2.59□□□□□ -1.99
CTNS-210ENST00000576979 PP632Q6XCG6 107 aa2.58□□□□□ -2
CTNS-210ENST00000576979 RYR3Q15413 4870 aa2.56□□□□□ -2
CTNS-210ENST00000576979 LRP2P98164 4655 aa2.55□□□□□ -2
CTNS-210ENST00000576979 KIAA1109Q2LD37 5005 aa2.55□□□□□ -2
CTNS-210ENST00000576979 PLAC4Q8WY50 150 aa2.55□□□□□ -2
CTNS-210ENST00000576979 KRTAP19-2Q3LHN2 52 aa2.53□□□□□ -2
CTNS-210ENST00000576979 MUC17Q685J3 4493 aa2.52□□□□□ -2.01
CTNS-210ENST00000576979 LPAP08519 4548 aa2.51□□□□□ -2.01
CTNS-210ENST00000576979 TNP1P09430 55 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms