RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 LCE1CQ5T751 118 aa2.24□□□□□ -2.05
TSR1-203ENST00000575049 LCE1BQ5T7P3 118 aa2.24□□□□□ -2.05
TSR1-203ENST00000575049 VWFP04275 2813 aa2.22□□□□□ -2.05
TSR1-203ENST00000575049 H1FX-AS1Q4G0G2 97 aa2.22□□□□□ -2.05
TSR1-203ENST00000575049 TENM2Q9NT68 2774 aa2.21□□□□□ -2.05
TSR1-203ENST00000575049 SETD2Q9BYW2 2564 aaPredicted RBP2.21□□□□□ -2.06
TSR1-203ENST00000575049 KRTAP10-10P60014 251 aa2.21□□□□□ -2.06
TSR1-203ENST00000575049 CENPEQ02224 2701 aa2.2□□□□□ -2.06
TSR1-203ENST00000575049 CUBNO60494 3623 aa2.2□□□□□ -2.06
TSR1-203ENST00000575049 SPINK1P00995 79 aa2.2□□□□□ -2.06
TSR1-203ENST00000575049 ZNF469Q96JG9 3925 aaPredicted RBP2.2□□□□□ -2.06
TSR1-203ENST00000575049 ACANP16112 2415 aa2.2□□□□□ -2.06
TSR1-203ENST00000575049 MTORP42345 2549 aa2.2□□□□□ -2.06
TSR1-203ENST00000575049 RPS29P62273 56 aaKnown RBP2.19□□□□□ -2.06
TSR1-203ENST00000575049 TENM3Q9P273 2699 aa2.18□□□□□ -2.06
TSR1-203ENST00000575049 F8P00451 2351 aa2.17□□□□□ -2.06
TSR1-203ENST00000575049 HUWE1Q7Z6Z7 4374 aaKnown RBP2.17□□□□□ -2.06
TSR1-203ENST00000575049 DNAH10Q8IVF4 4471 aa2.17□□□□□ -2.06
TSR1-203ENST00000575049 TENM1Q9UKZ4 2725 aa2.17□□□□□ -2.06
TSR1-203ENST00000575049 DNAH8Q96JB1 4490 aa2.17□□□□□ -2.06
TSR1-203ENST00000575049 TENM4Q6N022 2769 aa2.16□□□□□ -2.06
TSR1-203ENST00000575049 OTOGQ6ZRI0 2925 aa2.15□□□□□ -2.06
TSR1-203ENST00000575049 DNAH3Q8TD57 4116 aa2.15□□□□□ -2.07
TSR1-203ENST00000575049 COX6B2Q6YFQ2 88 aa2.15□□□□□ -2.07
TSR1-203ENST00000575049 PKD1L1Q8TDX9 2849 aa2.15□□□□□ -2.07
TSR1-203ENST00000575049 DYNC2H1Q8NCM8 4307 aaKnown RBP2.15□□□□□ -2.07
TSR1-203ENST00000575049 DNAH9Q9NYC9 4486 aa2.14□□□□□ -2.07
TSR1-203ENST00000575049 SRRM2Q9UQ35 2752 aaKnown RBP2.14□□□□□ -2.07
TSR1-203ENST00000575049 DNAH17Q9UFH2 4485 aa2.13□□□□□ -2.07
TSR1-203ENST00000575049 HELZ2Q9BYK8 2649 aaKnown RBP2.13□□□□□ -2.07
TSR1-203ENST00000575049 NSD1Q96L73 2696 aaPredicted RBP2.13□□□□□ -2.07
TSR1-203ENST00000575049 RPL37P61927 97 aaKnown RBP2.13□□□□□ -2.07
TSR1-203ENST00000575049 ATRQ13535 2644 aa2.12□□□□□ -2.07
TSR1-203ENST00000575049 KRTAP12-1P59990 96 aa2.12□□□□□ -2.07
TSR1-203ENST00000575049 ANK2Q01484 3957 aa2.12□□□□□ -2.07
TSR1-203ENST00000575049 VPS13DQ5THJ4 4388 aa2.12□□□□□ -2.07
TSR1-203ENST00000575049 NOTCH1P46531 2555 aa2.11□□□□□ -2.07
TSR1-203ENST00000575049 CRIPTQ9P021 101 aa2.11□□□□□ -2.07
TSR1-203ENST00000575049 KRTAP6-3Q3LI67 103 aa2.1□□□□□ -2.07
TSR1-203ENST00000575049 TRRAPQ9Y4A5 3859 aa2.1□□□□□ -2.07
TSR1-203ENST00000575049 ITPR2Q14571 2701 aa2.09□□□□□ -2.07
TSR1-203ENST00000575049 FBN1P35555 2871 aaKnown RBP2.09□□□□□ -2.08
TSR1-203ENST00000575049 C9orf92A6NGG3 77 aa2.06□□□□□ -2.08
TSR1-203ENST00000575049 CMYA5Q8N3K9 4069 aa2.06□□□□□ -2.08
TSR1-203ENST00000575049 PLECQ15149 4684 aaKnown RBP2.06□□□□□ -2.08
TSR1-203ENST00000575049 S4R3F8 94 aa2.05□□□□□ -2.08
TSR1-203ENST00000575049 C10orf95Q9H7T3 257 aa2.04□□□□□ -2.08
TSR1-203ENST00000575049 SACSQ9NZJ4 4579 aa2.04□□□□□ -2.08
TSR1-203ENST00000575049 LYSTQ99698 3801 aa2.03□□□□□ -2.08
TSR1-203ENST00000575049 DNAH2Q9P225 4427 aa2.03□□□□□ -2.08
TSR1-203ENST00000575049 A0A0D9SG42 100 aa2.03□□□□□ -2.08
TSR1-203ENST00000575049 DNAH11Q96DT5 4516 aa2.03□□□□□ -2.08
TSR1-203ENST00000575049 STAB1Q9NY15 2570 aa2.03□□□□□ -2.09
TSR1-203ENST00000575049 NBEAL1Q6ZS30 2694 aa2.02□□□□□ -2.09
TSR1-203ENST00000575049 PRKDCP78527 4128 aaKnown RBP2.02□□□□□ -2.09
TSR1-203ENST00000575049 LRP1BQ9NZR2 4599 aa2.01□□□□□ -2.09
TSR1-203ENST00000575049 KRTAP10-4P60372 401 aaPredicted RBP2.01□□□□□ -2.09
TSR1-203ENST00000575049 STAB2Q8WWQ8 2551 aa2.01□□□□□ -2.09
TSR1-203ENST00000575049 FRAS1Q86XX4 4008 aa2.01□□□□□ -2.09
TSR1-203ENST00000575049 COL7A1Q02388 2944 aa2□□□□□ -2.09
TSR1-203ENST00000575049 M0QZ58 72 aa2□□□□□ -2.09
TSR1-203ENST00000575049 PLAC4Q8WY50 150 aa2□□□□□ -2.09
TSR1-203ENST00000575049 TGP01266 2768 aa1.99□□□□□ -2.09
TSR1-203ENST00000575049 STARD9Q9P2P6 4700 aa1.98□□□□□ -2.09
TSR1-203ENST00000575049 DNAH5Q8TE73 4624 aa1.98□□□□□ -2.09
TSR1-203ENST00000575049 DNAH6Q9C0G6 4158 aa1.97□□□□□ -2.09
TSR1-203ENST00000575049 COL6A5A8TX70 2615 aa1.97□□□□□ -2.09
TSR1-203ENST00000575049 DNAH7Q8WXX0 4024 aa1.97□□□□□ -2.09
TSR1-203ENST00000575049 HECTD4Q9Y4D8 3996 aa1.97□□□□□ -2.09
TSR1-203ENST00000575049 MEGF8Q7Z7M0 2845 aa1.96□□□□□ -2.1
TSR1-203ENST00000575049 CSMD3Q7Z407 3707 aa1.96□□□□□ -2.1
TSR1-203ENST00000575049 KRTAP21-3Q3LHN1 58 aa1.96□□□□□ -2.1
TSR1-203ENST00000575049 FLG2Q5D862 2391 aaPredicted RBP1.95□□□□□ -2.1
TSR1-203ENST00000575049 SMR3BP02814 79 aaPredicted RBP1.94□□□□□ -2.1
TSR1-203ENST00000575049 MGAM2Q2M2H8 2515 aa1.93□□□□□ -2.1
TSR1-203ENST00000575049 PKHD1L1Q86WI1 4243 aa1.93□□□□□ -2.1
TSR1-203ENST00000575049 KRTAP5-8O75690 187 aa1.92□□□□□ -2.1
TSR1-203ENST00000575049 PKD1P98161 4303 aa1.91□□□□□ -2.1
TSR1-203ENST00000575049 DNHD1Q96M86 4753 aa1.89□□□□□ -2.11
TSR1-203ENST00000575049 FAT2Q9NYQ8 4349 aa1.89□□□□□ -2.11
TSR1-203ENST00000575049 KRTAP12-4P60329 112 aa1.89□□□□□ -2.11
TSR1-203ENST00000575049 UBR4Q5T4S7 5183 aa1.88□□□□□ -2.11
TSR1-203ENST00000575049 APOBP04114 4563 aaKnown RBP1.88□□□□□ -2.11
TSR1-203ENST00000575049 PCLOQ9Y6V0 5065 aa1.87□□□□□ -2.11
TSR1-203ENST00000575049 LRP1Q07954 4544 aaKnown RBP1.87□□□□□ -2.11
TSR1-203ENST00000575049 KMT2AQ03164 3969 aa1.87□□□□□ -2.11
TSR1-203ENST00000575049 DYNC1H1Q14204 4646 aaKnown RBP1.87□□□□□ -2.11
TSR1-203ENST00000575049 KRTAP5-7Q6L8G8 165 aa1.87□□□□□ -2.11
TSR1-203ENST00000575049 FAT3Q8TDW7 4589 aa1.87□□□□□ -2.11
TSR1-203ENST00000575049 PKHD1P08F94 4074 aa1.87□□□□□ -2.11
TSR1-203ENST00000575049 VPS13BQ7Z7G8 4022 aa1.86□□□□□ -2.11
TSR1-203ENST00000575049 MYCBP2O75592 4640 aa1.84□□□□□ -2.11
TSR1-203ENST00000575049 FAT1Q14517 4588 aa1.84□□□□□ -2.11
TSR1-203ENST00000575049 HYDINQ4G0P3 5121 aa1.83□□□□□ -2.12
TSR1-203ENST00000575049 MT1HL1P0DM35 61 aa1.83□□□□□ -2.12
TSR1-203ENST00000575049 KRTAP12-3P60328 96 aa1.82□□□□□ -2.12
TSR1-203ENST00000575049 Q5VSD8 79 aa1.82□□□□□ -2.12
TSR1-203ENST00000575049 TNXBP22105 4242 aa1.82□□□□□ -2.12
TSR1-203ENST00000575049 HSPG2P98160 4391 aa1.81□□□□□ -2.12
TSR1-203ENST00000575049 DMBT1Q9UGM3 2413 aaPredicted RBP1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms