RNA–Protein interactions for RNA: ENST00000574194.1

ERCC4-205, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 3

Gene ERCC4, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-205ENST00000574194 ACACAQ13085 2346 aa-0.39□□□□□ -2.47
ERCC4-205ENST00000574194 KRTAP8-1Q8IUC2 63 aa-0.39□□□□□ -2.47
ERCC4-205ENST00000574194 SPTAN1Q13813 2472 aaKnown RBP-0.39□□□□□ -2.47
ERCC4-205ENST00000574194 VPS13CQ709C8 3753 aa-0.39□□□□□ -2.47
ERCC4-205ENST00000574194 ABCA9Q8IUA7 1624 aa-0.39□□□□□ -2.47
ERCC4-205ENST00000574194 DNAH12Q6ZR08 3092 aa-0.39□□□□□ -2.47
ERCC4-205ENST00000574194 CEP250Q9BV73 2442 aa-0.39□□□□□ -2.47
ERCC4-205ENST00000574194 ANKRD36CQ5JPF3 1778 aa-0.4□□□□□ -2.47
ERCC4-205ENST00000574194 DNAH9Q9NYC9 4486 aa-0.4□□□□□ -2.47
ERCC4-205ENST00000574194 INO80Q9ULG1 1556 aaPredicted RBP-0.4□□□□□ -2.47
ERCC4-205ENST00000574194 SPENQ96T58 3664 aaKnown RBP-0.4□□□□□ -2.47
ERCC4-205ENST00000574194 MT1HP80294 61 aa-0.4□□□□□ -2.47
ERCC4-205ENST00000574194 S4R3F8 94 aa-0.4□□□□□ -2.47
ERCC4-205ENST00000574194 ASXL1Q8IXJ9 1541 aa-0.4□□□□□ -2.47
ERCC4-205ENST00000574194 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.41□□□□□ -2.47
ERCC4-205ENST00000574194 DNAH11Q96DT5 4516 aa-0.41□□□□□ -2.47
ERCC4-205ENST00000574194 MT1AP04731 61 aa-0.41□□□□□ -2.48
ERCC4-205ENST00000574194 MT1FP04733 61 aa-0.41□□□□□ -2.48
ERCC4-205ENST00000574194 MT1MQ8N339 61 aa-0.41□□□□□ -2.48
ERCC4-205ENST00000574194 RANBP2P49792 3224 aaKnown RBP-0.42□□□□□ -2.48
ERCC4-205ENST00000574194 FRYLO94915 3013 aa-0.42□□□□□ -2.48
ERCC4-205ENST00000574194 MT2AP02795 61 aa-0.42□□□□□ -2.48
ERCC4-205ENST00000574194 MT1GP13640 62 aa-0.42□□□□□ -2.48
ERCC4-205ENST00000574194 MINOS1Q5TGZ0 78 aa-0.42□□□□□ -2.48
ERCC4-205ENST00000574194 ITSN2Q9NZM3 1697 aa-0.43□□□□□ -2.48
ERCC4-205ENST00000574194 SPTBN5Q9NRC6 3674 aaKnown RBP-0.43□□□□□ -2.48
ERCC4-205ENST00000574194 USP34Q70CQ2 3546 aa-0.43□□□□□ -2.48
ERCC4-205ENST00000574194 TRRAPQ9Y4A5 3859 aa-0.43□□□□□ -2.48
ERCC4-205ENST00000574194 WDFY3Q8IZQ1 3526 aa-0.43□□□□□ -2.48
ERCC4-205ENST00000574194 DNAH14Q0VDD8 3507 aa-0.44□□□□□ -2.48
ERCC4-205ENST00000574194 SMR3BP02814 79 aaPredicted RBP-0.44□□□□□ -2.48
ERCC4-205ENST00000574194 MT1XP80297 61 aa-0.44□□□□□ -2.48
ERCC4-205ENST00000574194 DNAH17Q9UFH2 4485 aa-0.44□□□□□ -2.48
ERCC4-205ENST00000574194 WT1-ASQ06250 92 aa-0.45□□□□□ -2.48
ERCC4-205ENST00000574194 DNAH8Q96JB1 4490 aa-0.45□□□□□ -2.48
ERCC4-205ENST00000574194 CENPFP49454 3210 aa-0.45□□□□□ -2.48
ERCC4-205ENST00000574194 ABCC6O95255 1503 aa-0.45□□□□□ -2.48
ERCC4-205ENST00000574194 DNAH10Q8IVF4 4471 aa-0.45□□□□□ -2.48
ERCC4-205ENST00000574194 VPS13AQ96RL7 3174 aa-0.45□□□□□ -2.48
ERCC4-205ENST00000574194 C3P01024 1663 aa-0.46□□□□□ -2.48
ERCC4-205ENST00000574194 BRCA2P51587 3418 aa-0.46□□□□□ -2.48
ERCC4-205ENST00000574194 DEFB114Q30KQ6 69 aa-0.46□□□□□ -2.48
ERCC4-205ENST00000574194 UTRNP46939 3433 aa-0.46□□□□□ -2.48
ERCC4-205ENST00000574194 KIF1AQ12756 1690 aa-0.46□□□□□ -2.48
ERCC4-205ENST00000574194 DMDP11532 3685 aa-0.47□□□□□ -2.48
ERCC4-205ENST00000574194 RPS27P42677 84 aaKnown RBP-0.47□□□□□ -2.48
ERCC4-205ENST00000574194 DEFB1P60022 68 aa-0.47□□□□□ -2.48
ERCC4-205ENST00000574194 RPS27LQ71UM5 84 aaKnown RBP-0.47□□□□□ -2.48
ERCC4-205ENST00000574194 ASPMQ8IZT6 3477 aa-0.47□□□□□ -2.49
ERCC4-205ENST00000574194 GOLGB1Q14789 3259 aaKnown RBP-0.47□□□□□ -2.49
ERCC4-205ENST00000574194 DNMBPQ6XZF7 1577 aa-0.48□□□□□ -2.49
ERCC4-205ENST00000574194 FCER1GP30273 86 aa-0.48□□□□□ -2.49
ERCC4-205ENST00000574194 MT1EP04732 61 aa-0.49□□□□□ -2.49
ERCC4-205ENST00000574194 NCBP2-AS2Q69YL0 99 aa-0.49□□□□□ -2.49
ERCC4-205ENST00000574194 C6orf48Q9UBA6 75 aa-0.49□□□□□ -2.49
ERCC4-205ENST00000574194 MROH1Q8NDA8 1641 aa-0.49□□□□□ -2.49
ERCC4-205ENST00000574194 MADDQ8WXG6 1647 aa-0.49□□□□□ -2.49
ERCC4-205ENST00000574194 XIRP2A4UGR9 3374 aa-0.5□□□□□ -2.49
ERCC4-205ENST00000574194 LINC01549A6NIU2 74 aa-0.5□□□□□ -2.49
ERCC4-205ENST00000574194 MT1LQ93083 61 aa-0.5□□□□□ -2.49
ERCC4-205ENST00000574194 TOGARAM1Q9Y4F4 1720 aa-0.5□□□□□ -2.49
ERCC4-205ENST00000574194 SFTA3P0C7M3 94 aa-0.51□□□□□ -2.49
ERCC4-205ENST00000574194 DEFB110Q30KQ9 67 aa-0.51□□□□□ -2.49
ERCC4-205ENST00000574194 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.51□□□□□ -2.49
ERCC4-205ENST00000574194 RPS29P62273 56 aaKnown RBP-0.52□□□□□ -2.49
ERCC4-205ENST00000574194 DEFB104AQ8WTQ1 72 aa-0.53□□□□□ -2.49
ERCC4-205ENST00000574194 EFCAB5A4FU69 1503 aa-0.54□□□□□ -2.5
ERCC4-205ENST00000574194 KRTAP19-5Q3LI72 72 aa-0.54□□□□□ -2.5
ERCC4-205ENST00000574194 CLPSL2Q6UWE3 100 aa-0.55□□□□□ -2.5
ERCC4-205ENST00000574194 H3BUA1 57 aa-0.57□□□□□ -2.5
ERCC4-205ENST00000574194 KRTAP19-2Q3LHN2 52 aa-0.57□□□□□ -2.5
ERCC4-205ENST00000574194 IGLV5-48A0A075B6I7 105 aa-0.58□□□□□ -2.5
ERCC4-205ENST00000574194 CCDC180Q9P1Z9 1646 aa-0.59□□□□□ -2.5
ERCC4-205ENST00000574194 K7EMI3 77 aa-0.59□□□□□ -2.5
ERCC4-205ENST00000574194 M0R1W7 72 aa-0.59□□□□□ -2.5
ERCC4-205ENST00000574194 ABCA6Q8N139 1617 aa-0.6□□□□□ -2.5
ERCC4-205ENST00000574194 CLASP1Q7Z460 1538 aa-0.6□□□□□ -2.51
ERCC4-205ENST00000574194 LY75O60449 1722 aa-0.61□□□□□ -2.51
ERCC4-205ENST00000574194 CDC42BPAQ5VT25 1732 aa-0.61□□□□□ -2.51
ERCC4-205ENST00000574194 CROCC2H7BZ55 1655 aa-0.61□□□□□ -2.51
ERCC4-205ENST00000574194 DEFB4AO15263 64 aa-0.61□□□□□ -2.51
ERCC4-205ENST00000574194 TNP1P09430 55 aa-0.61□□□□□ -2.51
ERCC4-205ENST00000574194 A0A087WWC5 75 aa-0.62□□□□□ -2.51
ERCC4-205ENST00000574194 MMP24-AS1A0A0U1RRL7 71 aa-0.62□□□□□ -2.51
ERCC4-205ENST00000574194 TIAM1Q13009 1591 aa-0.63□□□□□ -2.51
ERCC4-205ENST00000574194 LINC01546A6NGU7 62 aa-0.64□□□□□ -2.51
ERCC4-205ENST00000574194 DEFB136Q30KP8 78 aa-0.64□□□□□ -2.51
ERCC4-205ENST00000574194 NOP10Q9NPE3 64 aaKnown RBP-0.64□□□□□ -2.51
ERCC4-205ENST00000574194 NMES1Q9C002 83 aa-0.65□□□□□ -2.51
ERCC4-205ENST00000574194 GLI2P10070 1586 aa-0.66□□□□□ -2.51
ERCC4-205ENST00000574194 SERF2P84101 59 aa-0.66□□□□□ -2.52
ERCC4-205ENST00000574194 S100ZQ8WXG8 99 aa-0.67□□□□□ -2.52
ERCC4-205ENST00000574194 EEA1Q15075 1411 aa-0.67□□□□□ -2.52
ERCC4-205ENST00000574194 SPART-AS1P0CW21 52 aa-0.68□□□□□ -2.52
ERCC4-205ENST00000574194 TTTY10Q9BZA0 68 aa-0.68□□□□□ -2.52
ERCC4-205ENST00000574194 M0QZ58 72 aa-0.69□□□□□ -2.52
ERCC4-205ENST00000574194 A8MTW9 85 aa-0.7□□□□□ -2.52
ERCC4-205ENST00000574194 LINC00308Q8TCZ7 52 aa-0.7□□□□□ -2.52
ERCC4-205ENST00000574194 ABRACLQ9P1F3 81 aa-0.7□□□□□ -2.52
ERCC4-205ENST00000574194 UGGT1Q9NYU2 1555 aa-0.7□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms