RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-213ENST00000571643 TEX49A0A1B0GTD5 131 aa1.93□□□□□ -2.1
CDC27-213ENST00000571643 MYMXA0A1B0GTQ4 84 aa1.93□□□□□ -2.1
CDC27-213ENST00000571643 ZNF815PA8K554 130 aa1.93□□□□□ -2.1
CDC27-213ENST00000571643 CSAG1Q6PB30 78 aa1.93□□□□□ -2.1
CDC27-213ENST00000571643 ZNF625Q96I27 306 aaPredicted RBP1.93□□□□□ -2.1
CDC27-213ENST00000571643 HSPG2P98160 4391 aa1.92□□□□□ -2.1
CDC27-213ENST00000571643 LOC101927531A0A1B0GV80 90 aa1.92□□□□□ -2.1
CDC27-213ENST00000571643 A0A1W2PNN7 141 aa1.92□□□□□ -2.1
CDC27-213ENST00000571643 LRP1BQ9NZR2 4599 aa1.91□□□□□ -2.1
CDC27-213ENST00000571643 APOBP04114 4563 aaKnown RBP1.91□□□□□ -2.1
CDC27-213ENST00000571643 F8WEM9 126 aa1.91□□□□□ -2.1
CDC27-213ENST00000571643 HRES1P13985 223 aa1.91□□□□□ -2.1
CDC27-213ENST00000571643 C20orf197Q8N268 126 aa1.91□□□□□ -2.1
CDC27-213ENST00000571643 LINC00158P58513 81 aa1.9□□□□□ -2.11
CDC27-213ENST00000571643 HAMPP81172 84 aa1.9□□□□□ -2.11
CDC27-213ENST00000571643 ABCA13Q86UQ4 5058 aa1.9□□□□□ -2.11
CDC27-213ENST00000571643 DNAH5Q8TE73 4624 aa1.89□□□□□ -2.11
CDC27-213ENST00000571643 ATP5EP2Q5VTU8 51 aa1.89□□□□□ -2.11
CDC27-213ENST00000571643 Q6JHZ5 121 aa1.89□□□□□ -2.11
CDC27-213ENST00000571643 KCNQ1DNQ9H478 68 aa1.89□□□□□ -2.11
CDC27-213ENST00000571643 DMBT1Q9UGM3 2413 aaPredicted RBP1.89□□□□□ -2.11
CDC27-213ENST00000571643 VPS13BQ7Z7G8 4022 aa1.88□□□□□ -2.11
CDC27-213ENST00000571643 FLG2Q5D862 2391 aaPredicted RBP1.88□□□□□ -2.11
CDC27-213ENST00000571643 PDE6GP18545 87 aa1.88□□□□□ -2.11
CDC27-213ENST00000571643 SPRR1AP35321 89 aa1.88□□□□□ -2.11
CDC27-213ENST00000571643 KRTAP13-1Q8IUC0 172 aa1.88□□□□□ -2.11
CDC27-213ENST00000571643 DNAH8Q96JB1 4490 aa1.87□□□□□ -2.11
CDC27-213ENST00000571643 MT1HL1P0DM35 61 aa1.87□□□□□ -2.11
CDC27-213ENST00000571643 SPAG11AQ6PDA7 123 aa1.87□□□□□ -2.11
CDC27-213ENST00000571643 ETDCA0A1B0GVM5 59 aa1.86□□□□□ -2.11
CDC27-213ENST00000571643 JMJD7-PLA2G4BH0Y9G9 81 aa1.86□□□□□ -2.11
CDC27-213ENST00000571643 IGLV6-57P01721 117 aa1.86□□□□□ -2.11
CDC27-213ENST00000571643 ATXN8Q156A1 80 aa1.86□□□□□ -2.11
CDC27-213ENST00000571643 LINC00308Q8TCZ7 52 aa1.86□□□□□ -2.11
CDC27-213ENST00000571643 FAT1Q14517 4588 aa1.85□□□□□ -2.11
CDC27-213ENST00000571643 A0A0G2JQZ4 141 aa1.85□□□□□ -2.11
CDC27-213ENST00000571643 DNAL4O96015 105 aa1.85□□□□□ -2.11
CDC27-213ENST00000571643 Q6ZRX8 168 aa1.85□□□□□ -2.11
CDC27-213ENST00000571643 MUSTN1Q8IVN3 82 aa1.85□□□□□ -2.11
CDC27-213ENST00000571643 RPS29P62273 56 aaKnown RBP1.84□□□□□ -2.11
CDC27-213ENST00000571643 SSBP3-AS1Q7Z2R9 100 aa1.84□□□□□ -2.11
CDC27-213ENST00000571643 PKHD1L1Q86WI1 4243 aa1.84□□□□□ -2.12
CDC27-213ENST00000571643 NCR3O14931 201 aa1.83□□□□□ -2.12
CDC27-213ENST00000571643 SPINK1P00995 79 aa1.83□□□□□ -2.12
CDC27-213ENST00000571643 SPRR1BP22528 89 aa1.83□□□□□ -2.12
CDC27-213ENST00000571643 TPRXLQ17RH7 258 aa1.83□□□□□ -2.12
CDC27-213ENST00000571643 SPRR4Q96PI1 79 aa1.83□□□□□ -2.12
CDC27-213ENST00000571643 PRR15LQ9BU68 103 aa1.83□□□□□ -2.12
CDC27-213ENST00000571643 MYCBP2O75592 4640 aa1.82□□□□□ -2.12
CDC27-213ENST00000571643 IGKV3D-7A0A0C4DH55 119 aa1.82□□□□□ -2.12
CDC27-213ENST00000571643 UQCR11O14957 56 aa1.82□□□□□ -2.12
CDC27-213ENST00000571643 COX7BP24311 80 aa1.82□□□□□ -2.12
CDC27-213ENST00000571643 PRLHP81277 87 aa1.82□□□□□ -2.12
CDC27-213ENST00000571643 LINC01558Q9Y6Z2 57 aa1.82□□□□□ -2.12
CDC27-213ENST00000571643 IGLV5-48A0A075B6I7 105 aa1.81□□□□□ -2.12
CDC27-213ENST00000571643 H0YGX0 51 aa1.81□□□□□ -2.12
CDC27-213ENST00000571643 LINC00304Q8N9R0 145 aa1.81□□□□□ -2.12
CDC27-213ENST00000571643 LINC00846Q9NV44 126 aa1.81□□□□□ -2.12
CDC27-213ENST00000571643 HERC1Q15751 4861 aa1.8□□□□□ -2.12
CDC27-213ENST00000571643 TRBV7-4A0A0J9YYF1 115 aa1.8□□□□□ -2.12
CDC27-213ENST00000571643 KRTAP13-2Q52LG2 175 aa1.8□□□□□ -2.12
CDC27-213ENST00000571643 IGFL1Q6UW32 110 aa1.8□□□□□ -2.12
CDC27-213ENST00000571643 SMIM11BQ8TCY0 68 aa1.8□□□□□ -2.12
CDC27-213ENST00000571643 INE1O15225 51 aa1.79□□□□□ -2.12
CDC27-213ENST00000571643 LINC00575Q6W349 94 aa1.79□□□□□ -2.12
CDC27-213ENST00000571643 FAT3Q8TDW7 4589 aa1.79□□□□□ -2.12
CDC27-213ENST00000571643 LRP1Q07954 4544 aaKnown RBP1.78□□□□□ -2.12
CDC27-213ENST00000571643 LOC110117498A0A087WWA1 95 aa1.78□□□□□ -2.12
CDC27-213ENST00000571643 NDUFB1O75438 58 aa1.78□□□□□ -2.12
CDC27-213ENST00000571643 HMCN2Q8NDA2 5059 aa1.77□□□□□ -2.13
CDC27-213ENST00000571643 A0A087WVE0 104 aa1.77□□□□□ -2.13
CDC27-213ENST00000571643 SNURFQ9Y675 71 aa1.77□□□□□ -2.13
CDC27-213ENST00000571643 Q6ZQY7 126 aa1.76□□□□□ -2.13
CDC27-213ENST00000571643 TNXBP22105 4242 aa1.75□□□□□ -2.13
CDC27-213ENST00000571643 H0Y9P7 68 aa1.75□□□□□ -2.13
CDC27-213ENST00000571643 COA5Q86WW8 74 aa1.75□□□□□ -2.13
CDC27-213ENST00000571643 DEFB105AQ8NG35 78 aa1.75□□□□□ -2.13
CDC27-213ENST00000571643 OBSCN-AS1Q96MR7 158 aa1.75□□□□□ -2.13
CDC27-213ENST00000571643 SPATA8Q6RVD6 105 aa1.74□□□□□ -2.13
CDC27-213ENST00000571643 KRTAP21-2Q3LI59 83 aa1.72□□□□□ -2.13
CDC27-213ENST00000571643 LINC00208Q96KT6 92 aa1.72□□□□□ -2.13
CDC27-213ENST00000571643 Q96NJ1 140 aa1.72□□□□□ -2.13
CDC27-213ENST00000571643 IGKV4-1P06312 121 aa1.71□□□□□ -2.14
CDC27-213ENST00000571643 ACYP2P14621 99 aa1.7□□□□□ -2.14
CDC27-213ENST00000571643 NREPQ16612 68 aa1.7□□□□□ -2.14
CDC27-213ENST00000571643 UBR4Q5T4S7 5183 aa1.7□□□□□ -2.14
CDC27-213ENST00000571643 UBL5Q9BZL1 73 aa1.7□□□□□ -2.14
CDC27-213ENST00000571643 LRP2P98164 4655 aa1.7□□□□□ -2.14
CDC27-213ENST00000571643 SPINK7P58062 85 aa1.69□□□□□ -2.14
CDC27-213ENST00000571643 LINC00472Q9H8W2 130 aa1.69□□□□□ -2.14
CDC27-213ENST00000571643 RPL37P61927 97 aaKnown RBP1.68□□□□□ -2.14
CDC27-213ENST00000571643 RNF213Q63HN8 5207 aa1.67□□□□□ -2.14
CDC27-213ENST00000571643 ZCCHC13Q8WW36 166 aaKnown RBP1.67□□□□□ -2.14
CDC27-213ENST00000571643 C9orf92A6NGG3 77 aa1.65□□□□□ -2.15
CDC27-213ENST00000571643 PCOTHQ58A44 107 aa1.65□□□□□ -2.15
CDC27-213ENST00000571643 A0A1B0GU69 56 aa1.64□□□□□ -2.15
CDC27-213ENST00000571643 LPAP08519 4548 aa1.63□□□□□ -2.15
CDC27-213ENST00000571643 PLAC4Q8WY50 150 aa1.63□□□□□ -2.15
CDC27-213ENST00000571643 KRTAP4-1Q9BYQ7 146 aa1.62□□□□□ -2.15
CDC27-213ENST00000571643 KRTAP19-2Q3LHN2 52 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms