RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 CFC1P0CG37 223 aa3.51□□□□□ -1.85
LINC00556-201ENST00000569603 DEFB116Q30KQ4 102 aa3.51□□□□□ -1.85
LINC00556-201ENST00000569603 Q5W150 140 aa3.51□□□□□ -1.85
LINC00556-201ENST00000569603 PRR15LQ9BU68 103 aa3.51□□□□□ -1.85
LINC00556-201ENST00000569603 ANAPC11Q9NYG5 84 aa3.51□□□□□ -1.85
LINC00556-201ENST00000569603 TOMM7Q9P0U1 55 aa3.51□□□□□ -1.85
LINC00556-201ENST00000569603 TRBV7-4A0A0J9YYF1 115 aa3.5□□□□□ -1.85
LINC00556-201ENST00000569603 NDUFAF8A1L188 74 aa3.5□□□□□ -1.85
LINC00556-201ENST00000569603 COX7B2Q8TF08 81 aa3.5□□□□□ -1.85
LINC00556-201ENST00000569603 DMAC1Q96GE9 116 aa3.5□□□□□ -1.85
LINC00556-201ENST00000569603 TPRXLQ17RH7 258 aa3.49□□□□□ -1.85
LINC00556-201ENST00000569603 SPAG11AQ6PDA7 123 aa3.49□□□□□ -1.85
LINC00556-201ENST00000569603 FSIP2Q5CZC0 6907 aa3.49□□□□□ -1.85
LINC00556-201ENST00000569603 IGKV3D-7A0A0C4DH55 119 aa3.48□□□□□ -1.85
LINC00556-201ENST00000569603 TYMSOSQ8TAI1 123 aa3.48□□□□□ -1.85
LINC00556-201ENST00000569603 A0A087WVE0 104 aa3.47□□□□□ -1.85
LINC00556-201ENST00000569603 LINC00304Q8N9R0 145 aa3.47□□□□□ -1.85
LINC00556-201ENST00000569603 ST20-AS1Q8NBB2 130 aa3.47□□□□□ -1.85
LINC00556-201ENST00000569603 ZNF625Q96I27 306 aaPredicted RBP3.47□□□□□ -1.85
LINC00556-201ENST00000569603 IGKV2-28A0A075B6P5 120 aa3.46□□□□□ -1.86
LINC00556-201ENST00000569603 DNAL4O96015 105 aa3.46□□□□□ -1.86
LINC00556-201ENST00000569603 IGKV2D-28P01615 120 aa3.46□□□□□ -1.86
LINC00556-201ENST00000569603 PRLHP81277 87 aa3.46□□□□□ -1.86
LINC00556-201ENST00000569603 COX17Q14061 63 aa3.45□□□□□ -1.86
LINC00556-201ENST00000569603 Q9BRP9 147 aa3.45□□□□□ -1.86
LINC00556-201ENST00000569603 SPRR1AP35321 89 aa3.44□□□□□ -1.86
LINC00556-201ENST00000569603 KRTAP25-1Q3LHN0 102 aa3.44□□□□□ -1.86
LINC00556-201ENST00000569603 KRTAP13-3Q3SY46 172 aa3.44□□□□□ -1.86
LINC00556-201ENST00000569603 KRTAP4-1Q9BYQ7 146 aa3.44□□□□□ -1.86
LINC00556-201ENST00000569603 LCE3CQ5T5A8 94 aa3.43□□□□□ -1.86
LINC00556-201ENST00000569603 SPRR4Q96PI1 79 aa3.43□□□□□ -1.86
LINC00556-201ENST00000569603 PLNP26678 52 aa3.42□□□□□ -1.86
LINC00556-201ENST00000569603 LINC01558Q9Y6Z2 57 aa3.42□□□□□ -1.86
LINC00556-201ENST00000569603 OBSCNQ5VST9 7968 aa3.42□□□□□ -1.86
LINC00556-201ENST00000569603 FLGP20930 4061 aaPredicted RBP3.41□□□□□ -1.86
LINC00556-201ENST00000569603 NDUFB1O75438 58 aa3.41□□□□□ -1.86
LINC00556-201ENST00000569603 HIGD2AQ9BW72 106 aa3.41□□□□□ -1.86
LINC00556-201ENST00000569603 KCNQ1DNQ9H478 68 aa3.41□□□□□ -1.86
LINC00556-201ENST00000569603 NREPQ16612 68 aa3.4□□□□□ -1.87
LINC00556-201ENST00000569603 KRTAP19-2Q3LHN2 52 aa3.4□□□□□ -1.87
LINC00556-201ENST00000569603 LINC00158P58513 81 aa3.38□□□□□ -1.87
LINC00556-201ENST00000569603 RPS29P62273 56 aaKnown RBP3.38□□□□□ -1.87
LINC00556-201ENST00000569603 UBL5Q9BZL1 73 aa3.38□□□□□ -1.87
LINC00556-201ENST00000569603 LINC00846Q9NV44 126 aa3.38□□□□□ -1.87
LINC00556-201ENST00000569603 SPINK1P00995 79 aa3.37□□□□□ -1.87
LINC00556-201ENST00000569603 NCR3O14931 201 aa3.35□□□□□ -1.87
LINC00556-201ENST00000569603 UQCR11O14957 56 aa3.35□□□□□ -1.87
LINC00556-201ENST00000569603 IGLV6-57P01721 117 aa3.35□□□□□ -1.87
LINC00556-201ENST00000569603 LINC00208Q96KT6 92 aa3.35□□□□□ -1.87
LINC00556-201ENST00000569603 OBSCN-AS1Q96MR7 158 aa3.35□□□□□ -1.87
LINC00556-201ENST00000569603 KRTAP4-3Q9BYR4 195 aa3.35□□□□□ -1.87
LINC00556-201ENST00000569603 Q6ZRX8 168 aa3.34□□□□□ -1.87
LINC00556-201ENST00000569603 PRO2289Q9P1D8 64 aa3.34□□□□□ -1.87
LINC00556-201ENST00000569603 H0Y9P7 68 aa3.33□□□□□ -1.88
LINC00556-201ENST00000569603 SPINT4Q6UDR6 99 aa3.33□□□□□ -1.88
LINC00556-201ENST00000569603 SSBP3-AS1Q7Z2R9 100 aa3.33□□□□□ -1.88
LINC00556-201ENST00000569603 ETDCA0A1B0GVM5 59 aa3.32□□□□□ -1.88
LINC00556-201ENST00000569603 PDE6GP18545 87 aa3.32□□□□□ -1.88
LINC00556-201ENST00000569603 SPRR1BP22528 89 aa3.31□□□□□ -1.88
LINC00556-201ENST00000569603 MT1HP80294 61 aa3.31□□□□□ -1.88
LINC00556-201ENST00000569603 CRCT1Q9UGL9 99 aa3.31□□□□□ -1.88
LINC00556-201ENST00000569603 R4GN34 69 aa3.31□□□□□ -1.88
LINC00556-201ENST00000569603 SPATA8Q6RVD6 105 aa3.3□□□□□ -1.88
LINC00556-201ENST00000569603 LINC00308Q8TCZ7 52 aa3.3□□□□□ -1.88
LINC00556-201ENST00000569603 JMJD7-PLA2G4BH0Y9G9 81 aa3.29□□□□□ -1.88
LINC00556-201ENST00000569603 SPINK7P58062 85 aa3.29□□□□□ -1.88
LINC00556-201ENST00000569603 ZCCHC13Q8WW36 166 aaKnown RBP3.29□□□□□ -1.88
LINC00556-201ENST00000569603 SSPOA2VEC9 5147 aa3.27□□□□□ -1.89
LINC00556-201ENST00000569603 PCOTHQ58A44 107 aa3.26□□□□□ -1.89
LINC00556-201ENST00000569603 USH2AO75445 5202 aa3.24□□□□□ -1.89
LINC00556-201ENST00000569603 IGLV5-48A0A075B6I7 105 aa3.23□□□□□ -1.89
LINC00556-201ENST00000569603 C9orf92A6NGG3 77 aa3.22□□□□□ -1.89
LINC00556-201ENST00000569603 RPL37P61927 97 aaKnown RBP3.21□□□□□ -1.9
LINC00556-201ENST00000569603 SMIM11BQ8TCY0 68 aa3.21□□□□□ -1.9
LINC00556-201ENST00000569603 A0A0G2JQZ4 141 aa3.2□□□□□ -1.9
LINC00556-201ENST00000569603 HRES1P13985 223 aa3.2□□□□□ -1.9
LINC00556-201ENST00000569603 COX7BP24311 80 aa3.2□□□□□ -1.9
LINC00556-201ENST00000569603 H0YGX0 51 aa3.18□□□□□ -1.9
LINC00556-201ENST00000569603 LINC00472Q9H8W2 130 aa3.18□□□□□ -1.9
LINC00556-201ENST00000569603 KRTAP5-2Q701N4 177 aa3.17□□□□□ -1.9
LINC00556-201ENST00000569603 COA5Q86WW8 74 aa3.17□□□□□ -1.9
LINC00556-201ENST00000569603 FCGBPQ9Y6R7 5405 aaPredicted RBP3.17□□□□□ -1.9
LINC00556-201ENST00000569603 IGKV4-1P06312 121 aa3.16□□□□□ -1.9
LINC00556-201ENST00000569603 LINC00575Q6W349 94 aa3.16□□□□□ -1.9
LINC00556-201ENST00000569603 DEFB105AQ8NG35 78 aa3.16□□□□□ -1.9
LINC00556-201ENST00000569603 Q96NJ1 140 aa3.16□□□□□ -1.9
LINC00556-201ENST00000569603 LOC110117498A0A087WWA1 95 aa3.14□□□□□ -1.91
LINC00556-201ENST00000569603 A0A1B0GU69 56 aa3.13□□□□□ -1.91
LINC00556-201ENST00000569603 LCE3EQ5T5B0 92 aa3.13□□□□□ -1.91
LINC00556-201ENST00000569603 LCE3AQ5TA76 89 aa3.13□□□□□ -1.91
LINC00556-201ENST00000569603 Q6ZQY7 126 aa3.13□□□□□ -1.91
LINC00556-201ENST00000569603 ACYP2P14621 99 aa3.12□□□□□ -1.91
LINC00556-201ENST00000569603 IGFL1Q6UW32 110 aa3.12□□□□□ -1.91
LINC00556-201ENST00000569603 M0R2T5 61 aa3.11□□□□□ -1.91
LINC00556-201ENST00000569603 COX6B2Q6YFQ2 88 aa3.11□□□□□ -1.91
LINC00556-201ENST00000569603 MACF1Q9UPN3 7388 aaKnown RBP3.11□□□□□ -1.91
LINC00556-201ENST00000569603 SYNE2Q8WXH0 6885 aaKnown RBP3.1□□□□□ -1.91
LINC00556-201ENST00000569603 INE1O15225 51 aa3.08□□□□□ -1.92
LINC00556-201ENST00000569603 MT2AP02795 61 aa3.07□□□□□ -1.92
LINC00556-201ENST00000569603 MT1FP04733 61 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms