RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 PDZD2O15018 2839 aa2.87□□□□□ -1.95
CHD9-210ENST00000564582 MAST4O15021 2626 aa2.87□□□□□ -1.95
CHD9-210ENST00000564582 DNAH3Q8TD57 4116 aa2.86□□□□□ -1.95
CHD9-210ENST00000564582 PKD1L1Q8TDX9 2849 aa2.86□□□□□ -1.95
CHD9-210ENST00000564582 LCE3AQ5TA76 89 aa2.86□□□□□ -1.95
CHD9-210ENST00000564582 PP632Q6XCG6 107 aa2.86□□□□□ -1.95
CHD9-210ENST00000564582 S4R3F8 94 aa2.86□□□□□ -1.95
CHD9-210ENST00000564582 NSD1Q96L73 2696 aaPredicted RBP2.86□□□□□ -1.95
CHD9-210ENST00000564582 TENM3Q9P273 2699 aa2.84□□□□□ -1.95
CHD9-210ENST00000564582 PLAC4Q8WY50 150 aa2.84□□□□□ -1.95
CHD9-210ENST00000564582 FLNBO75369 2602 aaKnown RBP2.83□□□□□ -1.96
CHD9-210ENST00000564582 FLG2Q5D862 2391 aaPredicted RBP2.82□□□□□ -1.96
CHD9-210ENST00000564582 ZNF469Q96JG9 3925 aaPredicted RBP2.82□□□□□ -1.96
CHD9-210ENST00000564582 NBEAL1Q6ZS30 2694 aa2.82□□□□□ -1.96
CHD9-210ENST00000564582 DYNC2H1Q8NCM8 4307 aaKnown RBP2.82□□□□□ -1.96
CHD9-210ENST00000564582 TRRAPQ9Y4A5 3859 aa2.8□□□□□ -1.96
CHD9-210ENST00000564582 TGP01266 2768 aa2.8□□□□□ -1.96
CHD9-210ENST00000564582 TENM1Q9UKZ4 2725 aa2.8□□□□□ -1.96
CHD9-210ENST00000564582 VPS13DQ5THJ4 4388 aa2.8□□□□□ -1.96
CHD9-210ENST00000564582 ITPR2Q14571 2701 aa2.8□□□□□ -1.96
CHD9-210ENST00000564582 USP24Q9UPU5 2620 aa2.79□□□□□ -1.96
CHD9-210ENST00000564582 A0A0D9SG42 100 aa2.79□□□□□ -1.96
CHD9-210ENST00000564582 CUBNO60494 3623 aa2.78□□□□□ -1.96
CHD9-210ENST00000564582 DNAH8Q96JB1 4490 aa2.78□□□□□ -1.97
CHD9-210ENST00000564582 ANK2Q01484 3957 aa2.77□□□□□ -1.97
CHD9-210ENST00000564582 MEGF8Q7Z7M0 2845 aa2.77□□□□□ -1.97
CHD9-210ENST00000564582 COL6A5A8TX70 2615 aa2.76□□□□□ -1.97
CHD9-210ENST00000564582 HUWE1Q7Z6Z7 4374 aaKnown RBP2.76□□□□□ -1.97
CHD9-210ENST00000564582 DNAH10Q8IVF4 4471 aa2.76□□□□□ -1.97
CHD9-210ENST00000564582 KRTAP10-8P60410 259 aa2.76□□□□□ -1.97
CHD9-210ENST00000564582 LYSTQ99698 3801 aa2.76□□□□□ -1.97
CHD9-210ENST00000564582 FBN1P35555 2871 aaKnown RBP2.76□□□□□ -1.97
CHD9-210ENST00000564582 NOTCH1P46531 2555 aa2.75□□□□□ -1.97
CHD9-210ENST00000564582 HECTD4Q9Y4D8 3996 aa2.75□□□□□ -1.97
CHD9-210ENST00000564582 KRTAP12-1P59990 96 aa2.75□□□□□ -1.97
CHD9-210ENST00000564582 STAB2Q8WWQ8 2551 aa2.75□□□□□ -1.97
CHD9-210ENST00000564582 KRTAP4-3Q9BYR4 195 aa2.74□□□□□ -1.97
CHD9-210ENST00000564582 C10orf95Q9H7T3 257 aa2.74□□□□□ -1.97
CHD9-210ENST00000564582 OBSCNQ5VST9 7968 aa2.74□□□□□ -1.97
CHD9-210ENST00000564582 DNAH17Q9UFH2 4485 aa2.74□□□□□ -1.97
CHD9-210ENST00000564582 FRAS1Q86XX4 4008 aa2.73□□□□□ -1.97
CHD9-210ENST00000564582 C9orf92A6NGG3 77 aa2.73□□□□□ -1.97
CHD9-210ENST00000564582 KRTAP13-4Q3LI77 160 aa2.73□□□□□ -1.97
CHD9-210ENST00000564582 STAB1Q9NY15 2570 aa2.72□□□□□ -1.97
CHD9-210ENST00000564582 COL7A1Q02388 2944 aa2.72□□□□□ -1.97
CHD9-210ENST00000564582 DNAH9Q9NYC9 4486 aa2.71□□□□□ -1.98
CHD9-210ENST00000564582 DNAH7Q8WXX0 4024 aa2.71□□□□□ -1.98
CHD9-210ENST00000564582 CMYA5Q8N3K9 4069 aa2.7□□□□□ -1.98
CHD9-210ENST00000564582 KRTAP10-1P60331 282 aa2.7□□□□□ -1.98
CHD9-210ENST00000564582 PRKDCP78527 4128 aaKnown RBP2.7□□□□□ -1.98
CHD9-210ENST00000564582 MGAM2Q2M2H8 2515 aa2.69□□□□□ -1.98
CHD9-210ENST00000564582 DNAH2Q9P225 4427 aa2.68□□□□□ -1.98
CHD9-210ENST00000564582 DNAH6Q9C0G6 4158 aa2.67□□□□□ -1.98
CHD9-210ENST00000564582 DMBT1Q9UGM3 2413 aaPredicted RBP2.66□□□□□ -1.98
CHD9-210ENST00000564582 INE1O15225 51 aa2.66□□□□□ -1.98
CHD9-210ENST00000564582 PRO2289Q9P1D8 64 aa2.66□□□□□ -1.98
CHD9-210ENST00000564582 R4GN34 69 aa2.66□□□□□ -1.98
CHD9-210ENST00000564582 PLECQ15149 4684 aaKnown RBP2.66□□□□□ -1.98
CHD9-210ENST00000564582 DNAH11Q96DT5 4516 aa2.64□□□□□ -1.99
CHD9-210ENST00000564582 SACSQ9NZJ4 4579 aa2.61□□□□□ -1.99
CHD9-210ENST00000564582 KRTAP5-2Q701N4 177 aa2.61□□□□□ -1.99
CHD9-210ENST00000564582 KRTAP5-5Q701N2 237 aaPredicted RBP2.59□□□□□ -1.99
CHD9-210ENST00000564582 CSMD3Q7Z407 3707 aa2.59□□□□□ -2
CHD9-210ENST00000564582 SPRR5A0A1B0GTR4 108 aa2.58□□□□□ -2
CHD9-210ENST00000564582 TNP1P09430 55 aa2.57□□□□□ -2
CHD9-210ENST00000564582 VPS13BQ7Z7G8 4022 aa2.57□□□□□ -2
CHD9-210ENST00000564582 FBN3Q75N90 2809 aa2.56□□□□□ -2
CHD9-210ENST00000564582 Q5VSD8 79 aa2.56□□□□□ -2
CHD9-210ENST00000564582 DNAH5Q8TE73 4624 aa2.55□□□□□ -2
CHD9-210ENST00000564582 LCE3DQ9BYE3 92 aa2.55□□□□□ -2
CHD9-210ENST00000564582 LRP1BQ9NZR2 4599 aa2.54□□□□□ -2
CHD9-210ENST00000564582 PKHD1L1Q86WI1 4243 aa2.53□□□□□ -2
CHD9-210ENST00000564582 STARD9Q9P2P6 4700 aa2.51□□□□□ -2.01
CHD9-210ENST00000564582 KRTAP10-4P60372 401 aaPredicted RBP2.51□□□□□ -2.01
CHD9-210ENST00000564582 KMT2AQ03164 3969 aa2.49□□□□□ -2.01
CHD9-210ENST00000564582 PKHD1P08F94 4074 aa2.47□□□□□ -2.01
CHD9-210ENST00000564582 LCE1CQ5T751 118 aa2.47□□□□□ -2.01
CHD9-210ENST00000564582 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
CHD9-210ENST00000564582 SMR3BP02814 79 aaPredicted RBP2.46□□□□□ -2.02
CHD9-210ENST00000564582 APOBP04114 4563 aaKnown RBP2.44□□□□□ -2.02
CHD9-210ENST00000564582 PKD1P98161 4303 aa2.44□□□□□ -2.02
CHD9-210ENST00000564582 LRP1Q07954 4544 aaKnown RBP2.44□□□□□ -2.02
CHD9-210ENST00000564582 DYNC1H1Q14204 4646 aaKnown RBP2.44□□□□□ -2.02
CHD9-210ENST00000564582 KRTAP10-10P60014 251 aa2.43□□□□□ -2.02
CHD9-210ENST00000564582 TNXBP22105 4242 aa2.42□□□□□ -2.02
CHD9-210ENST00000564582 FAT2Q9NYQ8 4349 aa2.4□□□□□ -2.02
CHD9-210ENST00000564582 FAT3Q8TDW7 4589 aa2.4□□□□□ -2.03
CHD9-210ENST00000564582 HSPG2P98160 4391 aa2.38□□□□□ -2.03
CHD9-210ENST00000564582 FAT1Q14517 4588 aa2.38□□□□□ -2.03
CHD9-210ENST00000564582 MYCBP2O75592 4640 aa2.32□□□□□ -2.04
CHD9-210ENST00000564582 KRTAP21-3Q3LHN1 58 aa2.32□□□□□ -2.04
CHD9-210ENST00000564582 MT1HL1P0DM35 61 aa2.29□□□□□ -2.04
CHD9-210ENST00000564582 DNHD1Q96M86 4753 aa2.29□□□□□ -2.04
CHD9-210ENST00000564582 KRTAP8-1Q8IUC2 63 aa2.28□□□□□ -2.04
CHD9-210ENST00000564582 KRTAP5-8O75690 187 aa2.25□□□□□ -2.05
CHD9-210ENST00000564582 UBR4Q5T4S7 5183 aa2.25□□□□□ -2.05
CHD9-210ENST00000564582 FLGP20930 4061 aaPredicted RBP2.23□□□□□ -2.05
CHD9-210ENST00000564582 SPRR2GQ9BYE4 73 aa2.23□□□□□ -2.05
CHD9-210ENST00000564582 HYDINQ4G0P3 5121 aa2.19□□□□□ -2.06
CHD9-210ENST00000564582 PCLOQ9Y6V0 5065 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms