RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 SPINK6Q6UWN8 80 aa2.81□□□□□ -1.96
CAPN3-211ENST00000562199 NSD1Q96L73 2696 aaPredicted RBP2.81□□□□□ -1.96
CAPN3-211ENST00000562199 KRTAP5-4Q6L8H1 288 aa2.8□□□□□ -1.96
CAPN3-211ENST00000562199 COX6B2Q6YFQ2 88 aa2.8□□□□□ -1.96
CAPN3-211ENST00000562199 KRTAP12-2P59991 146 aa2.79□□□□□ -1.96
CAPN3-211ENST00000562199 TENM1Q9UKZ4 2725 aa2.79□□□□□ -1.96
CAPN3-211ENST00000562199 PLECQ15149 4684 aaKnown RBP2.79□□□□□ -1.96
CAPN3-211ENST00000562199 TEP1Q99973 2627 aaKnown RBP2.78□□□□□ -1.96
CAPN3-211ENST00000562199 VPS13DQ5THJ4 4388 aa2.78□□□□□ -1.96
CAPN3-211ENST00000562199 Q6ZSA8 131 aa2.77□□□□□ -1.97
CAPN3-211ENST00000562199 OTOGQ6ZRI0 2925 aa2.76□□□□□ -1.97
CAPN3-211ENST00000562199 ATRQ13535 2644 aa2.75□□□□□ -1.97
CAPN3-211ENST00000562199 TENM2Q9NT68 2774 aa2.75□□□□□ -1.97
CAPN3-211ENST00000562199 ITPR2Q14571 2701 aa2.75□□□□□ -1.97
CAPN3-211ENST00000562199 KRTAP5-9P26371 169 aa2.75□□□□□ -1.97
CAPN3-211ENST00000562199 PP632Q6XCG6 107 aa2.75□□□□□ -1.97
CAPN3-211ENST00000562199 LYSTQ99698 3801 aa2.75□□□□□ -1.97
CAPN3-211ENST00000562199 F8P00451 2351 aa2.75□□□□□ -1.97
CAPN3-211ENST00000562199 PKD1L1Q8TDX9 2849 aa2.75□□□□□ -1.97
CAPN3-211ENST00000562199 DNHD1Q96M86 4753 aa2.74□□□□□ -1.97
CAPN3-211ENST00000562199 LCE3CQ5T5A8 94 aa2.74□□□□□ -1.97
CAPN3-211ENST00000562199 RPL37P61927 97 aaKnown RBP2.73□□□□□ -1.97
CAPN3-211ENST00000562199 KRTAP13-2Q52LG2 175 aa2.73□□□□□ -1.97
CAPN3-211ENST00000562199 FBN3Q75N90 2809 aa2.72□□□□□ -1.97
CAPN3-211ENST00000562199 PRKDCP78527 4128 aaKnown RBP2.72□□□□□ -1.97
CAPN3-211ENST00000562199 C10orf95Q9H7T3 257 aa2.72□□□□□ -1.97
CAPN3-211ENST00000562199 DNAH2Q9P225 4427 aa2.72□□□□□ -1.97
CAPN3-211ENST00000562199 A0A1B0GVY2 172 aa2.71□□□□□ -1.98
CAPN3-211ENST00000562199 KRTAP21-3Q3LHN1 58 aa2.71□□□□□ -1.98
CAPN3-211ENST00000562199 H1FX-AS1Q4G0G2 97 aa2.71□□□□□ -1.98
CAPN3-211ENST00000562199 DNAH11Q96DT5 4516 aa2.71□□□□□ -1.98
CAPN3-211ENST00000562199 STARD9Q9P2P6 4700 aa2.71□□□□□ -1.98
CAPN3-211ENST00000562199 DNAH6Q9C0G6 4158 aa2.7□□□□□ -1.98
CAPN3-211ENST00000562199 DNAH5Q8TE73 4624 aa2.7□□□□□ -1.98
CAPN3-211ENST00000562199 SACSQ9NZJ4 4579 aa2.69□□□□□ -1.98
CAPN3-211ENST00000562199 FRAS1Q86XX4 4008 aa2.69□□□□□ -1.98
CAPN3-211ENST00000562199 DNAH7Q8WXX0 4024 aa2.69□□□□□ -1.98
CAPN3-211ENST00000562199 HECTD4Q9Y4D8 3996 aa2.68□□□□□ -1.98
CAPN3-211ENST00000562199 KRTAP1-4P0C5Y4 121 aa2.68□□□□□ -1.98
CAPN3-211ENST00000562199 RPS29P62273 56 aaKnown RBP2.67□□□□□ -1.98
CAPN3-211ENST00000562199 SPINK1P00995 79 aa2.66□□□□□ -1.98
CAPN3-211ENST00000562199 SRRM2Q9UQ35 2752 aaKnown RBP2.66□□□□□ -1.98
CAPN3-211ENST00000562199 FBN1P35555 2871 aaKnown RBP2.65□□□□□ -1.98
CAPN3-211ENST00000562199 CSMD3Q7Z407 3707 aa2.65□□□□□ -1.99
CAPN3-211ENST00000562199 FLG2Q5D862 2391 aaPredicted RBP2.63□□□□□ -1.99
CAPN3-211ENST00000562199 KRTAP10-1P60331 282 aa2.62□□□□□ -1.99
CAPN3-211ENST00000562199 NBEAL1Q6ZS30 2694 aa2.61□□□□□ -1.99
CAPN3-211ENST00000562199 STAB1Q9NY15 2570 aa2.61□□□□□ -1.99
CAPN3-211ENST00000562199 LRP1BQ9NZR2 4599 aa2.61□□□□□ -1.99
CAPN3-211ENST00000562199 STAB2Q8WWQ8 2551 aa2.6□□□□□ -1.99
CAPN3-211ENST00000562199 NOTCH1P46531 2555 aa2.6□□□□□ -1.99
CAPN3-211ENST00000562199 PKHD1L1Q86WI1 4243 aa2.57□□□□□ -2
CAPN3-211ENST00000562199 KMT2AQ03164 3969 aa2.57□□□□□ -2
CAPN3-211ENST00000562199 OBSCNQ5VST9 7968 aa2.56□□□□□ -2
CAPN3-211ENST00000562199 SPRR5A0A1B0GTR4 108 aa2.56□□□□□ -2
CAPN3-211ENST00000562199 COL7A1Q02388 2944 aa2.56□□□□□ -2
CAPN3-211ENST00000562199 FAT2Q9NYQ8 4349 aa2.56□□□□□ -2
CAPN3-211ENST00000562199 C9orf92A6NGG3 77 aa2.55□□□□□ -2
CAPN3-211ENST00000562199 COL6A5A8TX70 2615 aa2.55□□□□□ -2
CAPN3-211ENST00000562199 APOBP04114 4563 aaKnown RBP2.54□□□□□ -2
CAPN3-211ENST00000562199 PKD1P98161 4303 aa2.54□□□□□ -2
CAPN3-211ENST00000562199 MGAM2Q2M2H8 2515 aa2.51□□□□□ -2.01
CAPN3-211ENST00000562199 DYNC1H1Q14204 4646 aaKnown RBP2.51□□□□□ -2.01
CAPN3-211ENST00000562199 KRTAP13-4Q3LI77 160 aa2.51□□□□□ -2.01
CAPN3-211ENST00000562199 VPS13BQ7Z7G8 4022 aa2.51□□□□□ -2.01
CAPN3-211ENST00000562199 LCE3EQ5T5B0 92 aa2.5□□□□□ -2.01
CAPN3-211ENST00000562199 KRTAP4-3Q9BYR4 195 aa2.5□□□□□ -2.01
CAPN3-211ENST00000562199 TGP01266 2768 aa2.49□□□□□ -2.01
CAPN3-211ENST00000562199 MEGF8Q7Z7M0 2845 aa2.49□□□□□ -2.01
CAPN3-211ENST00000562199 HYDINQ4G0P3 5121 aa2.49□□□□□ -2.01
CAPN3-211ENST00000562199 KRTAP10-4P60372 401 aaPredicted RBP2.49□□□□□ -2.01
CAPN3-211ENST00000562199 PKHD1P08F94 4074 aa2.48□□□□□ -2.01
CAPN3-211ENST00000562199 FAT3Q8TDW7 4589 aa2.47□□□□□ -2.01
CAPN3-211ENST00000562199 S4R3F8 94 aa2.47□□□□□ -2.01
CAPN3-211ENST00000562199 FAT1Q14517 4588 aa2.46□□□□□ -2.02
CAPN3-211ENST00000562199 LCE3AQ5TA76 89 aa2.46□□□□□ -2.02
CAPN3-211ENST00000562199 RYR3Q15413 4870 aa2.45□□□□□ -2.02
CAPN3-211ENST00000562199 A0A0D9SG42 100 aa2.45□□□□□ -2.02
CAPN3-211ENST00000562199 LRP1Q07954 4544 aaKnown RBP2.44□□□□□ -2.02
CAPN3-211ENST00000562199 TNXBP22105 4242 aa2.44□□□□□ -2.02
CAPN3-211ENST00000562199 HSPG2P98160 4391 aa2.43□□□□□ -2.02
CAPN3-211ENST00000562199 SMR3BP02814 79 aaPredicted RBP2.43□□□□□ -2.02
CAPN3-211ENST00000562199 KRTAP12-1P59990 96 aa2.42□□□□□ -2.02
CAPN3-211ENST00000562199 Q5VSD8 79 aa2.42□□□□□ -2.02
CAPN3-211ENST00000562199 KMT2CQ8NEZ4 4911 aaKnown RBP2.41□□□□□ -2.02
CAPN3-211ENST00000562199 M0QZ58 72 aa2.39□□□□□ -2.03
CAPN3-211ENST00000562199 BIRC6Q9NR09 4857 aa2.38□□□□□ -2.03
CAPN3-211ENST00000562199 EPPK1P58107 5090 aaKnown RBP2.38□□□□□ -2.03
CAPN3-211ENST00000562199 RYR2Q92736 4967 aa2.36□□□□□ -2.03
CAPN3-211ENST00000562199 MYCBP2O75592 4640 aa2.35□□□□□ -2.03
CAPN3-211ENST00000562199 KRTAP5-2Q701N4 177 aa2.31□□□□□ -2.04
CAPN3-211ENST00000562199 RYR1P21817 5038 aa2.3□□□□□ -2.04
CAPN3-211ENST00000562199 MT1HL1P0DM35 61 aa2.28□□□□□ -2.04
CAPN3-211ENST00000562199 PCLOQ9Y6V0 5065 aa2.28□□□□□ -2.04
CAPN3-211ENST00000562199 DMBT1Q9UGM3 2413 aaPredicted RBP2.26□□□□□ -2.05
CAPN3-211ENST00000562199 HERC2O95714 4834 aa2.26□□□□□ -2.05
CAPN3-211ENST00000562199 KRTAP10-10P60014 251 aa2.23□□□□□ -2.05
CAPN3-211ENST00000562199 KRTAP5-5Q701N2 237 aaPredicted RBP2.22□□□□□ -2.05
CAPN3-211ENST00000562199 HERC1Q15751 4861 aa2.22□□□□□ -2.05
CAPN3-211ENST00000562199 LPAP08519 4548 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms