RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 NOTCH2NLQ7Z3S9 236 aa2.65□□□□□ -1.99
HERC1-213ENST00000561359 TMEM254Q8TBM7 123 aa2.65□□□□□ -1.99
HERC1-213ENST00000561359 COX7B2Q8TF08 81 aa2.65□□□□□ -1.99
HERC1-213ENST00000561359 SND1-IT1Q9HBX3 110 aa2.65□□□□□ -1.99
HERC1-213ENST00000561359 ORMDL1Q9P0S3 153 aa2.65□□□□□ -1.99
HERC1-213ENST00000561359 LOC110117498A0A087WWA1 95 aa2.64□□□□□ -1.99
HERC1-213ENST00000561359 TMEM256-PLSCR3K7ERE1 68 aa2.64□□□□□ -1.99
HERC1-213ENST00000561359 NREPQ16612 68 aa2.64□□□□□ -1.99
HERC1-213ENST00000561359 C7orf65Q6ZTY9 151 aa2.64□□□□□ -1.99
HERC1-213ENST00000561359 Q8NDZ9 215 aa2.64□□□□□ -1.99
HERC1-213ENST00000561359 GPR98Q8WXG9 6306 aa2.63□□□□□ -1.99
HERC1-213ENST00000561359 NDUFAF8A1L188 74 aa2.63□□□□□ -1.99
HERC1-213ENST00000561359 A6NN06 94 aa2.63□□□□□ -1.99
HERC1-213ENST00000561359 H3BQ85 93 aa2.63□□□□□ -1.99
HERC1-213ENST00000561359 NCR3O14931 201 aa2.63□□□□□ -1.99
HERC1-213ENST00000561359 PDE6GP18545 87 aa2.63□□□□□ -1.99
HERC1-213ENST00000561359 MIR7-3HGQ8N6C7 128 aa2.63□□□□□ -1.99
HERC1-213ENST00000561359 CYP4F30PQ9H0H9 118 aa2.63□□□□□ -1.99
HERC1-213ENST00000561359 TRAV22A0A0B4J277 110 aa2.62□□□□□ -1.99
HERC1-213ENST00000561359 KRTAP5-9P26371 169 aa2.62□□□□□ -1.99
HERC1-213ENST00000561359 KRTAP2-1Q9BYU5 128 aa2.62□□□□□ -1.99
HERC1-213ENST00000561359 SPRR1AP35321 89 aa2.61□□□□□ -1.99
HERC1-213ENST00000561359 C6orf99Q4VX62 202 aa2.61□□□□□ -1.99
HERC1-213ENST00000561359 LCE3CQ5T5A8 94 aa2.61□□□□□ -1.99
HERC1-213ENST00000561359 Q5VV11 94 aa2.61□□□□□ -1.99
HERC1-213ENST00000561359 Q6ZQT0 140 aa2.61□□□□□ -1.99
HERC1-213ENST00000561359 SMIM11BQ8TCY0 68 aa2.61□□□□□ -1.99
HERC1-213ENST00000561359 OCR1Q9BZK8 76 aa2.61□□□□□ -1.99
HERC1-213ENST00000561359 KCNQ1DNQ9H478 68 aa2.61□□□□□ -1.99
HERC1-213ENST00000561359 A8MUN3 132 aa2.6□□□□□ -1.99
HERC1-213ENST00000561359 C1orf64Q8NEQ6 169 aa2.6□□□□□ -1.99
HERC1-213ENST00000561359 BPY2O14599 106 aa2.59□□□□□ -1.99
HERC1-213ENST00000561359 COX17Q14061 63 aa2.59□□□□□ -1.99
HERC1-213ENST00000561359 KRTAP5-1Q6L8H4 278 aa2.59□□□□□ -1.99
HERC1-213ENST00000561359 Q9BRP9 147 aa2.59□□□□□ -1.99
HERC1-213ENST00000561359 PSPHP1O15172 72 aa2.58□□□□□ -2
HERC1-213ENST00000561359 ELOF1P60002 83 aaKnown RBP2.58□□□□□ -2
HERC1-213ENST00000561359 ZCCHC13Q8WW36 166 aaKnown RBP2.58□□□□□ -2
HERC1-213ENST00000561359 CDC42SE1Q9NRR8 79 aa2.58□□□□□ -2
HERC1-213ENST00000561359 LOC101927531A0A1B0GV80 90 aa2.57□□□□□ -2
HERC1-213ENST00000561359 KRTAP16-1A8MUX0 517 aa2.57□□□□□ -2
HERC1-213ENST00000561359 HCG22E2RYF7 251 aa2.57□□□□□ -2
HERC1-213ENST00000561359 LINC00158P58513 81 aa2.57□□□□□ -2
HERC1-213ENST00000561359 DSCR10P59022 87 aa2.57□□□□□ -2
HERC1-213ENST00000561359 Q6ZRX8 168 aa2.57□□□□□ -2
HERC1-213ENST00000561359 ST20-AS1Q8NBB2 130 aa2.57□□□□□ -2
HERC1-213ENST00000561359 CHKB-CPT1BH3BT56 60 aa2.56□□□□□ -2
HERC1-213ENST00000561359 NDUFB1O75438 58 aa2.56□□□□□ -2
HERC1-213ENST00000561359 PRAC1Q96KF2 57 aa2.56□□□□□ -2
HERC1-213ENST00000561359 IGKV4-1P06312 121 aa2.55□□□□□ -2
HERC1-213ENST00000561359 SPRR2EP22531 72 aa2.55□□□□□ -2
HERC1-213ENST00000561359 SPRR2BP35325 72 aa2.55□□□□□ -2
HERC1-213ENST00000561359 SPRR2AP35326 72 aa2.55□□□□□ -2
HERC1-213ENST00000561359 LINC01554Q52M75 96 aa2.55□□□□□ -2
HERC1-213ENST00000561359 A0A0G2JQZ4 141 aa2.54□□□□□ -2
HERC1-213ENST00000561359 A0A1B0GW54 56 aa2.54□□□□□ -2
HERC1-213ENST00000561359 A8MU10 97 aa2.54□□□□□ -2
HERC1-213ENST00000561359 MP68P56378 58 aa2.54□□□□□ -2
HERC1-213ENST00000561359 SPANXA2-OT1Q8N9U9 137 aa2.54□□□□□ -2
HERC1-213ENST00000561359 SPTSSBQ8NFR3 76 aa2.54□□□□□ -2
HERC1-213ENST00000561359 LINC00313P59037 77 aa2.53□□□□□ -2
HERC1-213ENST00000561359 LINC00575Q6W349 94 aa2.53□□□□□ -2
HERC1-213ENST00000561359 A6NED7 52 aa2.52□□□□□ -2.01
HERC1-213ENST00000561359 A8MWP4 228 aa2.52□□□□□ -2.01
HERC1-213ENST00000561359 Q96NJ1 140 aa2.52□□□□□ -2.01
HERC1-213ENST00000561359 PRR15LQ9BU68 103 aa2.52□□□□□ -2.01
HERC1-213ENST00000561359 H3BPC8 53 aa2.51□□□□□ -2.01
HERC1-213ENST00000561359 SPRR1BP22528 89 aa2.51□□□□□ -2.01
HERC1-213ENST00000561359 COX7BP24311 80 aa2.51□□□□□ -2.01
HERC1-213ENST00000561359 LINC00208Q96KT6 92 aa2.51□□□□□ -2.01
HERC1-213ENST00000561359 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.5□□□□□ -2.01
HERC1-213ENST00000561359 CASC2Q6XLA1 102 aa2.5□□□□□ -2.01
HERC1-213ENST00000561359 SPRR2FQ96RM1 72 aa2.5□□□□□ -2.01
HERC1-213ENST00000561359 LINC01558Q9Y6Z2 57 aa2.5□□□□□ -2.01
HERC1-213ENST00000561359 IGFL1Q6UW32 110 aa2.49□□□□□ -2.01
HERC1-213ENST00000561359 DEFB105AQ8NG35 78 aa2.49□□□□□ -2.01
HERC1-213ENST00000561359 HRES1P13985 223 aa2.48□□□□□ -2.01
HERC1-213ENST00000561359 A8MUU9 505 aa2.47□□□□□ -2.01
HERC1-213ENST00000561359 SPRR2DP22532 72 aa2.47□□□□□ -2.01
HERC1-213ENST00000561359 KRTAP4-4Q9BYR3 166 aa2.47□□□□□ -2.01
HERC1-213ENST00000561359 Q6ZQY7 126 aa2.46□□□□□ -2.02
HERC1-213ENST00000561359 DHRS4-AS1Q9P1J3 65 aa2.46□□□□□ -2.02
HERC1-213ENST00000561359 KRTAP5-4Q6L8H1 288 aa2.45□□□□□ -2.02
HERC1-213ENST00000561359 COA5Q86WW8 74 aa2.45□□□□□ -2.02
HERC1-213ENST00000561359 Q8N9L7 120 aa2.45□□□□□ -2.02
HERC1-213ENST00000561359 IGHV6-1A0A0B4J1U7 121 aa2.44□□□□□ -2.02
HERC1-213ENST00000561359 IGLV5-48A0A075B6I7 105 aa2.42□□□□□ -2.02
HERC1-213ENST00000561359 MT1BP07438 61 aa2.42□□□□□ -2.02
HERC1-213ENST00000561359 SPINK7P58062 85 aa2.42□□□□□ -2.02
HERC1-213ENST00000561359 A0A1W2PNM2 257 aa2.41□□□□□ -2.02
HERC1-213ENST00000561359 H0Y9P7 68 aa2.41□□□□□ -2.02
HERC1-213ENST00000561359 SPATA8Q6RVD6 105 aa2.39□□□□□ -2.03
HERC1-213ENST00000561359 ADM2Q7Z4H4 148 aa2.39□□□□□ -2.03
HERC1-213ENST00000561359 DSTQ03001 7570 aaKnown RBP2.38□□□□□ -2.03
HERC1-213ENST00000561359 K7EQZ3 153 aa2.38□□□□□ -2.03
HERC1-213ENST00000561359 ROMO1P60602 79 aa2.37□□□□□ -2.03
HERC1-213ENST00000561359 LCE3EQ5T5B0 92 aa2.37□□□□□ -2.03
HERC1-213ENST00000561359 CSAG1Q6PB30 78 aa2.37□□□□□ -2.03
HERC1-213ENST00000561359 KRTAP12-2P59991 146 aa2.36□□□□□ -2.03
HERC1-213ENST00000561359 KRTAP8-1Q8IUC2 63 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms