RNA–Protein interactions for RNA: ENST00000560508.1

AP4E1-203, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best) BASIC

Gene AP4E1, Length 6,653 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-203ENST00000560508 VPS13DQ5THJ4 4388 aa3.11□□□□□ -1.91
AP4E1-203ENST00000560508 DNAH17Q9UFH2 4485 aa3.1□□□□□ -1.91
AP4E1-203ENST00000560508 COL7A1Q02388 2944 aa3.1□□□□□ -1.91
AP4E1-203ENST00000560508 DYNC2H1Q8NCM8 4307 aaKnown RBP3.08□□□□□ -1.92
AP4E1-203ENST00000560508 DNAH2Q9P225 4427 aa3.08□□□□□ -1.92
AP4E1-203ENST00000560508 DNAH7Q8WXX0 4024 aa3.06□□□□□ -1.92
AP4E1-203ENST00000560508 SRRM2Q9UQ35 2752 aaKnown RBP3.05□□□□□ -1.92
AP4E1-203ENST00000560508 DNAH11Q96DT5 4516 aa3.05□□□□□ -1.92
AP4E1-203ENST00000560508 KRTAP10-12P60413 245 aa3.05□□□□□ -1.92
AP4E1-203ENST00000560508 KRTAP23-1A1A580 65 aa3.04□□□□□ -1.92
AP4E1-203ENST00000560508 CSMD3Q7Z407 3707 aa3.04□□□□□ -1.92
AP4E1-203ENST00000560508 FBN3Q75N90 2809 aa3.04□□□□□ -1.92
AP4E1-203ENST00000560508 PLECQ15149 4684 aaKnown RBP3.03□□□□□ -1.92
AP4E1-203ENST00000560508 MEGF8Q7Z7M0 2845 aa3.03□□□□□ -1.93
AP4E1-203ENST00000560508 DNAH8Q96JB1 4490 aa3.02□□□□□ -1.93
AP4E1-203ENST00000560508 FAT2Q9NYQ8 4349 aa3.01□□□□□ -1.93
AP4E1-203ENST00000560508 PRKDCP78527 4128 aaKnown RBP3□□□□□ -1.93
AP4E1-203ENST00000560508 LORP23490 312 aaPredicted RBP2.97□□□□□ -1.93
AP4E1-203ENST00000560508 FRAS1Q86XX4 4008 aa2.96□□□□□ -1.93
AP4E1-203ENST00000560508 INE1O15225 51 aa2.96□□□□□ -1.94
AP4E1-203ENST00000560508 KMT2AQ03164 3969 aa2.96□□□□□ -1.94
AP4E1-203ENST00000560508 LCE3AQ5TA76 89 aa2.95□□□□□ -1.94
AP4E1-203ENST00000560508 STARD9Q9P2P6 4700 aa2.95□□□□□ -1.94
AP4E1-203ENST00000560508 KRTAP12-3P60328 96 aa2.94□□□□□ -1.94
AP4E1-203ENST00000560508 HECTD4Q9Y4D8 3996 aa2.93□□□□□ -1.94
AP4E1-203ENST00000560508 DNAH5Q8TE73 4624 aa2.92□□□□□ -1.94
AP4E1-203ENST00000560508 VPS13BQ7Z7G8 4022 aa2.92□□□□□ -1.94
AP4E1-203ENST00000560508 SACSQ9NZJ4 4579 aa2.9□□□□□ -1.95
AP4E1-203ENST00000560508 KRTAP4-1Q9BYQ7 146 aa2.9□□□□□ -1.95
AP4E1-203ENST00000560508 DYNC1H1Q14204 4646 aaKnown RBP2.89□□□□□ -1.95
AP4E1-203ENST00000560508 MT1HP80294 61 aa2.87□□□□□ -1.95
AP4E1-203ENST00000560508 LRP1BQ9NZR2 4599 aa2.85□□□□□ -1.95
AP4E1-203ENST00000560508 CRCT1Q9UGL9 99 aa2.83□□□□□ -1.96
AP4E1-203ENST00000560508 SPRR2GQ9BYE4 73 aa2.82□□□□□ -1.96
AP4E1-203ENST00000560508 PKHD1L1Q86WI1 4243 aa2.81□□□□□ -1.96
AP4E1-203ENST00000560508 KRTAP19-4Q3LI73 84 aa2.79□□□□□ -1.96
AP4E1-203ENST00000560508 MT2AP02795 61 aa2.78□□□□□ -1.96
AP4E1-203ENST00000560508 KRTAP8-1Q8IUC2 63 aa2.78□□□□□ -1.96
AP4E1-203ENST00000560508 DNHD1Q96M86 4753 aa2.78□□□□□ -1.96
AP4E1-203ENST00000560508 PKD1P98161 4303 aa2.77□□□□□ -1.97
AP4E1-203ENST00000560508 HYDINQ4G0P3 5121 aa2.75□□□□□ -1.97
AP4E1-203ENST00000560508 FAT1Q14517 4588 aa2.74□□□□□ -1.97
AP4E1-203ENST00000560508 APOBP04114 4563 aaKnown RBP2.73□□□□□ -1.97
AP4E1-203ENST00000560508 MT1FP04733 61 aa2.73□□□□□ -1.97
AP4E1-203ENST00000560508 FAT3Q8TDW7 4589 aa2.68□□□□□ -1.98
AP4E1-203ENST00000560508 PKHD1P08F94 4074 aa2.68□□□□□ -1.98
AP4E1-203ENST00000560508 HSPG2P98160 4391 aa2.67□□□□□ -1.98
AP4E1-203ENST00000560508 KRTAP17-1Q9BYP8 105 aa2.67□□□□□ -1.98
AP4E1-203ENST00000560508 KRTAP19-5Q3LI72 72 aa2.66□□□□□ -1.98
AP4E1-203ENST00000560508 TNXBP22105 4242 aa2.65□□□□□ -1.99
AP4E1-203ENST00000560508 KRTAP10-5P60370 271 aa2.64□□□□□ -1.99
AP4E1-203ENST00000560508 LCE3CQ5T5A8 94 aa2.63□□□□□ -1.99
AP4E1-203ENST00000560508 KRTAP19-8Q3LI54 63 aa2.62□□□□□ -1.99
AP4E1-203ENST00000560508 HERC1Q15751 4861 aa2.62□□□□□ -1.99
AP4E1-203ENST00000560508 MYCBP2O75592 4640 aa2.61□□□□□ -1.99
AP4E1-203ENST00000560508 RYR2Q92736 4967 aa2.59□□□□□ -2
AP4E1-203ENST00000560508 KRTAP19-1Q8IUB9 90 aa2.58□□□□□ -2
AP4E1-203ENST00000560508 MUC17Q685J3 4493 aa2.58□□□□□ -2
AP4E1-203ENST00000560508 KRTAP10-7P60409 375 aaPredicted RBP2.57□□□□□ -2
AP4E1-203ENST00000560508 SPRR2FQ96RM1 72 aa2.56□□□□□ -2
AP4E1-203ENST00000560508 KMT2CQ8NEZ4 4911 aaKnown RBP2.55□□□□□ -2
AP4E1-203ENST00000560508 RYR1P21817 5038 aa2.54□□□□□ -2
AP4E1-203ENST00000560508 MT1XP80297 61 aa2.54□□□□□ -2
AP4E1-203ENST00000560508 RYR3Q15413 4870 aa2.54□□□□□ -2
AP4E1-203ENST00000560508 LRP1Q07954 4544 aaKnown RBP2.53□□□□□ -2
AP4E1-203ENST00000560508 KRTAP9-8Q9BYQ0 159 aa2.53□□□□□ -2
AP4E1-203ENST00000560508 MT1BP07438 61 aa2.51□□□□□ -2.01
AP4E1-203ENST00000560508 LCE2CQ5TA81 110 aa2.5□□□□□ -2.01
AP4E1-203ENST00000560508 KRTAP9-3Q9BYQ3 159 aa2.47□□□□□ -2.01
AP4E1-203ENST00000560508 LPAP08519 4548 aa2.47□□□□□ -2.01
AP4E1-203ENST00000560508 ABCA13Q86UQ4 5058 aa2.47□□□□□ -2.01
AP4E1-203ENST00000560508 SPRR5A0A1B0GTR4 108 aa2.47□□□□□ -2.01
AP4E1-203ENST00000560508 KRTAP19-2Q3LHN2 52 aa2.46□□□□□ -2.02
AP4E1-203ENST00000560508 SPRR2EP22531 72 aa2.45□□□□□ -2.02
AP4E1-203ENST00000560508 SPRR2BP35325 72 aa2.45□□□□□ -2.02
AP4E1-203ENST00000560508 SPRR2AP35326 72 aa2.45□□□□□ -2.02
AP4E1-203ENST00000560508 KIAA1109Q2LD37 5005 aa2.43□□□□□ -2.02
AP4E1-203ENST00000560508 FLGP20930 4061 aaPredicted RBP2.41□□□□□ -2.02
AP4E1-203ENST00000560508 BIRC6Q9NR09 4857 aa2.41□□□□□ -2.02
AP4E1-203ENST00000560508 PCLOQ9Y6V0 5065 aa2.38□□□□□ -2.03
AP4E1-203ENST00000560508 MT1GP13640 62 aa2.38□□□□□ -2.03
AP4E1-203ENST00000560508 LRP2P98164 4655 aa2.37□□□□□ -2.03
AP4E1-203ENST00000560508 SPRR2DP22532 72 aa2.37□□□□□ -2.03
AP4E1-203ENST00000560508 LCE2BO14633 110 aa2.37□□□□□ -2.03
AP4E1-203ENST00000560508 KRTAP4-8A0A0G2JLE6 195 aa2.37□□□□□ -2.03
AP4E1-203ENST00000560508 KRTAP4-8Q9BYQ9 185 aa2.37□□□□□ -2.03
AP4E1-203ENST00000560508 LCE3BQ5TA77 95 aa2.36□□□□□ -2.03
AP4E1-203ENST00000560508 EPPK1P58107 5090 aaKnown RBP2.34□□□□□ -2.03
AP4E1-203ENST00000560508 KRTAP12-4P60329 112 aa2.33□□□□□ -2.04
AP4E1-203ENST00000560508 KRTAP19-3Q7Z4W3 81 aa2.29□□□□□ -2.04
AP4E1-203ENST00000560508 MT1LQ93083 61 aa2.29□□□□□ -2.04
AP4E1-203ENST00000560508 MT1EP04732 61 aa2.28□□□□□ -2.04
AP4E1-203ENST00000560508 HERC2O95714 4834 aa2.28□□□□□ -2.05
AP4E1-203ENST00000560508 LCE2DQ5TA82 110 aaPredicted RBP2.27□□□□□ -2.05
AP4E1-203ENST00000560508 MUC2Q02817 5179 aa2.26□□□□□ -2.05
AP4E1-203ENST00000560508 KRTAP19-6Q3LI70 58 aa2.25□□□□□ -2.05
AP4E1-203ENST00000560508 LCE3DQ9BYE3 92 aa2.23□□□□□ -2.05
AP4E1-203ENST00000560508 KRTAP4-7Q9BYR0 210 aa2.22□□□□□ -2.05
AP4E1-203ENST00000560508 MT1MQ8N339 61 aa2.2□□□□□ -2.06
AP4E1-203ENST00000560508 HMCN2Q8NDA2 5059 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms